Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:54:46 (3291571): wrapper (7.7.26015): starting
14:54:46 (3291571): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 14:54:46] Arguments: --nthreads 9
[2025-10-12 14:54:46] Threads: 9
[2025-10-12 14:54:46] Checking for CVMFS
[2025-10-12 14:54:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:54:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:54:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:54:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:54:48] 2.13.2.0 3310087 19059 228104 151633 0 247 26478632 40960001 14066 16776704 0 40770621 99.794 20728400 36943 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:54:48] CVMFS is ok
[2025-10-12 14:54:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:54:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:54:48] Further information can be found at the LHC@home message board.
[2025-10-12 14:54:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:54:48] Checking for apptainer binary...
[2025-10-12 14:54:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:54:48] Running /usr/bin/apptainer --version
[2025-10-12 14:54:48] apptainer version 1.4.3-1.el9
[2025-10-12 14:54:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:54:49] c-206-38.aglt2.org
[2025-10-12 14:54:49] apptainer works
[2025-10-12 14:54:49] Set ATHENA_PROC_NUMBER=9
[2025-10-12 14:54:49] Set ATHENA_CORE_NUMBER=9
[2025-10-12 14:54:49] Starting ATLAS job with PandaID=6839868791
[2025-10-12 14:54:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:57:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:57:25] 2025-10-12 21:56:45,168 | INFO     | PID=3295682 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:57:25] 2025-10-12 21:56:45,168 | INFO     | .. there are 12 such processes running
[2025-10-12 17:57:25] 2025-10-12 21:56:46,169 | INFO     | time since job start (10869s) is within the limit (172800.0s)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,323 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 17:57:25] 2025-10-12 21:56:46,331 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3226.7152968750006
[2025-10-12 17:57:25] 2025-10-12 21:56:46,341 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6839868791/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,341 | INFO     | extracted standard info from prmon json
[2025-10-12 17:57:25] 2025-10-12 21:56:46,341 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:57:25] 2025-10-12 21:56:46,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:57:25] 2025-10-12 21:56:46,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:57:25] 2025-10-12 21:56:46,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:57:25] 2025-10-12 21:56:46,344 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:57:25] 2025-10-12 21:56:46,345 | INFO     | sum of square deviations: 1719738153.22034
[2025-10-12 17:57:25] 2025-10-12 21:56:46,345 | INFO     | sum of deviations: -8222627750.830498
[2025-10-12 17:57:25] 2025-10-12 21:56:46,345 | INFO     | mean x: 1760300786.5762713
[2025-10-12 17:57:25] 2025-10-12 21:56:46,346 | INFO     | mean y: 2578755.4689265536
[2025-10-12 17:57:25] 2025-10-12 21:56:46,346 | INFO     | -- intersect: 8419149656.33926
[2025-10-12 17:57:25] 2025-10-12 21:56:46,346 | INFO     | intersect: 8419149656.33926
[2025-10-12 17:57:25] 2025-10-12 21:56:46,346 | INFO     | chi2: 2.9066333011783487
[2025-10-12 17:57:25] 2025-10-12 21:56:46,346 | INFO     | sum of square deviations: 1578118599.691861
[2025-10-12 17:57:25] 2025-10-12 21:56:46,347 | INFO     | sum of deviations: 3553811580.2732577
[2025-10-12 17:57:25] 2025-10-12 21:56:46,347 | INFO     | mean x: 1760300634.0872092
[2025-10-12 17:57:25] 2025-10-12 21:56:46,347 | INFO     | mean y: 2591154.715116279
[2025-10-12 17:57:25] 2025-10-12 21:56:46,347 | INFO     | -- intersect: -3961481494.4526763
[2025-10-12 17:57:25] 2025-10-12 21:56:46,347 | INFO     | intersect: -3961481494.4526763
[2025-10-12 17:57:25] 2025-10-12 21:56:46,347 | INFO     | chi2: 2.231107153598666
[2025-10-12 17:57:25] 2025-10-12 21:56:46,347 | INFO     | current chi2=2.231107153598666 (change=23.240845252334534 %)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,348 | INFO     | right removable region: 171
[2025-10-12 17:57:25] 2025-10-12 21:56:46,348 | INFO     | sum of square deviations: 1578067176.5116236
[2025-10-12 17:57:25] 2025-10-12 21:56:46,349 | INFO     | sum of deviations: -42817118775.39535
[2025-10-12 17:57:25] 2025-10-12 21:56:46,349 | INFO     | mean x: 1760300939.0930233
[2025-10-12 17:57:25] 2025-10-12 21:56:46,349 | INFO     | mean y: 2615596.5872093025
[2025-10-12 17:57:25] 2025-10-12 21:56:46,349 | INFO     | -- intersect: 47764216313.86237
[2025-10-12 17:57:25] 2025-10-12 21:56:46,349 | INFO     | intersect: 47764216313.86237
[2025-10-12 17:57:25] 2025-10-12 21:56:46,349 | INFO     | chi2: 0.954108210258894
[2025-10-12 17:57:25] 2025-10-12 21:56:46,349 | INFO     | current chi2=0.954108210258894 (change=67.1747994536463 %)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,349 | INFO     | sum of square deviations: 1444396349.7006042
[2025-10-12 17:57:25] 2025-10-12 21:56:46,350 | INFO     | sum of deviations: -44071910135.16167
[2025-10-12 17:57:25] 2025-10-12 21:56:46,350 | INFO     | mean x: 1760301091.6107783
[2025-10-12 17:57:25] 2025-10-12 21:56:46,350 | INFO     | mean y: 2617028.0898203594
[2025-10-12 17:57:25] 2025-10-12 21:56:46,350 | INFO     | -- intersect: 53713519535.13232
[2025-10-12 17:57:25] 2025-10-12 21:56:46,350 | INFO     | intersect: 53713519535.13232
[2025-10-12 17:57:25] 2025-10-12 21:56:46,351 | INFO     | chi2: 0.9334323735408622
[2025-10-12 17:57:25] 2025-10-12 21:56:46,351 | INFO     | current chi2=0.9334323735408622 (change=2.167032679911804 %)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,351 | INFO     | left removable region: 20
[2025-10-12 17:57:25] 2025-10-12 21:56:46,351 | INFO     | sum of square deviations: 1067805888.6887404
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | sum of deviations: -16305897808.701992
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | mean x: 1760301213.642384
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | mean y: 2610748.1721854303
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | -- intersect: 26883237654.467194
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | intersect: 26883237654.467194
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | chi2: 0.15023971687729623
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | -- intersect: 26883237654.467194
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | current memory leak: -15.27 B/s (using 151 data points, chi2=0.15)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | could have reported an average CPU frequency of 3229 MHz (9 samples)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,352 | INFO     | ..............................
[2025-10-12 17:57:25] 2025-10-12 21:56:46,353 | INFO     | . Timing measurements:
[2025-10-12 17:57:25] 2025-10-12 21:56:46,353 | INFO     | . get job = 0 s
[2025-10-12 17:57:25] 2025-10-12 21:56:46,353 | INFO     | . initial setup = 3 s
[2025-10-12 17:57:25] 2025-10-12 21:56:46,353 | INFO     | . payload setup = 22 s
[2025-10-12 17:57:25] 2025-10-12 21:56:46,353 | INFO     | . stage-in = 0 s
[2025-10-12 17:57:25] 2025-10-12 21:56:46,353 | INFO     | . payload execution = 10774 s
[2025-10-12 17:57:25] 2025-10-12 21:56:46,353 | INFO     | . stage-out = 4 s
[2025-10-12 17:57:25] 2025-10-12 21:56:46,353 | INFO     | . log creation = 0 s
[2025-10-12 17:57:25] 2025-10-12 21:56:46,353 | INFO     | ..............................
[2025-10-12 17:57:25] 2025-10-12 21:56:46,493 | INFO     | 
[2025-10-12 17:57:25] 2025-10-12 21:56:46,493 | INFO     | job summary report
[2025-10-12 17:57:25] 2025-10-12 21:56:46,493 | INFO     | --------------------------------------------------
[2025-10-12 17:57:25] 2025-10-12 21:56:46,493 | INFO     | PanDA job id: 6839868791
[2025-10-12 17:57:25] 2025-10-12 21:56:46,493 | INFO     | task id: 46676269
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | errors: (none)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | pilot state: finished 
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | transexitcode: 0
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | exeerrorcode: 0
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | exeerrordiag: 
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | exitcode: 0
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | exitmsg: OK
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | cpuconsumptiontime: 34199 s
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | nevents: 400
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | neventsw: 0
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | pid: 3302232
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | pgrp: 3302232
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | corecount: 9
[2025-10-12 17:57:25] 2025-10-12 21:56:46,494 | INFO     | event service: False
[2025-10-12 17:57:25] 2025-10-12 21:56:46,495 | INFO     | sizes: {0: 2348680, 1: 2348879, 12: 2348879, 20: 2349169, 23: 2349197, 10802: 2378370, 10803: 2378497, 10809: 2387551, 10811: 2387607, 10826: 2387865}
[2025-10-12 17:57:25] 2025-10-12 21:56:46,495 | INFO     | --------------------------------------------------
[2025-10-12 17:57:25] 2025-10-12 21:56:46,495 | INFO     | 
[2025-10-12 17:57:25] 2025-10-12 21:56:46,495 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 17:57:25] 2025-10-12 21:56:46,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | job 6839868791 has completed (purged errors)
[2025-10-12 17:57:25] 2025-10-12 21:56:46,608 | INFO     | overall cleanup function is called
[2025-10-12 17:57:25] 2025-10-12 21:56:47,634 | INFO     | --- collectZombieJob: --- 10, [3302232]
[2025-10-12 17:57:25] 2025-10-12 21:56:47,634 | INFO     | zombie collector waiting for pid 3302232
[2025-10-12 17:57:25] 2025-10-12 21:56:47,634 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:57:25] 2025-10-12 21:56:47,634 | INFO     | collected zombie processes
[2025-10-12 17:57:25] 2025-10-12 21:56:47,634 | INFO     | will attempt to kill all subprocesses of pid=3302232
[2025-10-12 17:57:25] 2025-10-12 21:56:48,868 | INFO     | process IDs to be killed: [3302232] (in reverse order)
[2025-10-12 17:57:25] 2025-10-12 21:56:49,092 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:57:25] 2025-10-12 21:56:49,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:57:25] 2025-10-12 21:56:49,116 | INFO     | did not find any defunct processes belonging to 3302232
[2025-10-12 17:57:25] 2025-10-12 21:56:49,155 | INFO     | did not find any defunct processes belonging to 3302232
[2025-10-12 17:57:25] 2025-10-12 21:56:49,155 | INFO     | ready for new job
[2025-10-12 17:57:25] 2025-10-12 21:56:49,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:57:25] 2025-10-12 21:56:49,158 | INFO     | ***************************************
[2025-10-12 17:57:25] 2025-10-12 21:56:49,166 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:57:25] 2025-10-12 21:56:49,166 | INFO     | ***************************************
[2025-10-12 17:57:25] 2025-10-12 21:56:49,166 | INFO     | 
[2025-10-12 17:57:25] 2025-10-12 21:56:49,178 | INFO     | architecture information:
[2025-10-12 17:57:25] 2025-10-12 21:56:49,178 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:57:25] 2025-10-12 21:56:49,219 | INFO     | cat /etc/os-release:
[2025-10-12 17:57:25] NAME="CentOS Linux"
[2025-10-12 17:57:25] VERSION="7 (Core)"
[2025-10-12 17:57:25] ID="centos"
[2025-10-12 17:57:25] ID_LIKE="rhel fedora"
[2025-10-12 17:57:25] VERSION_ID="7"
[2025-10-12 17:57:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:57:25] ANSI_COLOR="0;31"
[2025-10-12 17:57:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:57:25] HOME_URL="https://www.centos.org/"
[2025-10-12 17:57:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:57:25] 
[2025-10-12 17:57:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:57:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:57:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:57:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:57:25] 
[2025-10-12 17:57:25] 2025-10-12 21:56:49,222 | INFO     | ***************************************
[2025-10-12 17:57:25] 2025-10-12 21:56:49,733 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 17:57:25] 2025-10-12 21:56:49,815 | INFO     | sufficient remaining disk space (84826652672 B)
[2025-10-12 17:57:25] 2025-10-12 21:56:49,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:57:25] 2025-10-12 21:56:49,815 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:57:25] 2025-10-12 21:56:49,815 | INFO     | update_server=False
[2025-10-12 17:57:25] 2025-10-12 21:56:49,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:57:25] 2025-10-12 21:56:49,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:57:25] 2025-10-12 21:56:49,914 | INFO     | all data control threads have been joined
[2025-10-12 17:57:25] 2025-10-12 21:56:49,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:57:25] 2025-10-12 21:56:49,980 | INFO     | aborting loop
[2025-10-12 17:57:25] 2025-10-12 21:56:50,823 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:50,900 | INFO     | all payload control threads have been joined
[2025-10-12 17:57:25] 2025-10-12 21:56:50,922 | INFO     | [data] control thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:50,986 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:50,987 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:51,002 | INFO     | all job control threads have been joined
[2025-10-12 17:57:25] 2025-10-12 21:56:51,044 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:51,051 | INFO     | [job] validate thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:51,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:57:25] 2025-10-12 21:56:51,472 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:51,537 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:51,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:57:25] 2025-10-12 21:56:51,662 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:51,687 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:51,830 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:51,914 | INFO     | [payload] control thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:52,013 | INFO     | [job] control thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:52,211 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:52,545 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:55,112 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:57:25] 2025-10-12 21:56:56,032 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:57:25] 2025-10-12 21:56:57,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139848848316224)>', '<ExcThread(monitor, started 139848574801664)>']
[2025-10-12 17:57:25] 2025-10-12 21:57:02,496 | INFO     | all workflow threads have been joined
[2025-10-12 17:57:25] 2025-10-12 21:57:02,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:57:25] 2025-10-12 21:57:02,497 | INFO     | traces error code: 0
[2025-10-12 17:57:25] 2025-10-12 21:57:02,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:57:25] 2025-10-12 21:57:22,571 | INFO     | PID=3295682 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:57:25] 2025-10-12 21:57:22,571 | INFO     | .. there are 12 such processes running
[2025-10-12 17:57:25] 2025-10-12 21:57:22,614 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:57:25] 2025-10-12 21:57:22,614 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:57:25] 2025-10-12 21:57:22,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:57:25] 2025-10-12 21:57:22,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:57:25] 2025-10-12 21:57:22,614 | INFO     | [monitor] control thread has ended
[2025-10-12 17:57:25] 2025-10-12 21:57:23,607 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:57:25] 2025-10-12 21:57:23,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:57:25] 2025-10-12 21:57:23,662 [wrapper] pilotpid: 3295682
[2025-10-12 17:57:25] 2025-10-12 21:57:23,665 [wrapper] Pilot exit status: 0
[2025-10-12 17:57:25] 2025-10-12 21:57:23,718 [wrapper] pandaids: 6839868791
[2025-10-12 17:57:25] 2025-10-12 21:57:24,784 [wrapper] cleanup supervisor_pilot 3638314 3295683
[2025-10-12 17:57:25] 2025-10-12 21:57:24,789 [wrapper] Test setup, not cleaning
[2025-10-12 17:57:25] 2025-10-12 21:57:24,792 [wrapper] apfmon messages muted
[2025-10-12 17:57:25] 2025-10-12 21:57:24,794 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:57:25] 2025-10-12 21:57:24,797 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:57:25]  *** Error codes and diagnostics ***
[2025-10-12 17:57:25]     "exeErrorCode": 0,
[2025-10-12 17:57:25]     "exeErrorDiag": "",
[2025-10-12 17:57:25]     "pilotErrorCode": 0,
[2025-10-12 17:57:25]     "pilotErrorDiag": "",
[2025-10-12 17:57:25]  *** Listing of results directory ***
[2025-10-12 17:57:25] total 412648
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 06:57 pilot3.tar.gz
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 07:05 queuedata.json
[2025-10-12 17:57:25] -rwx------. 1 boincer umatlas     36292 Oct 12 07:06 runpilot2-wrapper.sh
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:57:25] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:54 run_atlas
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:54 job.xml
[2025-10-12 17:57:25] -rw-r--r--. 2 boincer umatlas 221595158 Oct 12 14:54 EVNT.46676267._003661.pool.root.1
[2025-10-12 17:57:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:54 start_atlas.sh
[2025-10-12 17:57:25] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:54 shared
[2025-10-12 17:57:25] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 14:54 input.tar.gz
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:54 boinc_lockfile
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 14:54 pandaJob.out
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas    975528 Oct 12 14:55 agis_schedconf.cvmfs.json
[2025-10-12 17:57:25] drwx------. 5 boincer umatlas      4096 Oct 12 14:55 pilot3
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas 193302181 Oct 12 17:55 HITS.46676269._076740.pool.root.1
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas       531 Oct 12 17:55 boinc_task_state.xml
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas      1036 Oct 12 17:56 memory_monitor_summary.json
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas   1560580 Oct 12 17:56 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas    413100 Oct 12 17:56 log.46676269._076740.job.log.tgz.1
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas      7782 Oct 12 17:56 heartbeat.json
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas      6900 Oct 12 17:56 init_data.xml
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas        95 Oct 12 17:57 pilot_heartbeat.json
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas       823 Oct 12 17:57 pilotlog.txt
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:57 boinc_mmap_file
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas        28 Oct 12 17:57 wrapper_checkpoint.txt
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas   1462717 Oct 12 17:57 log.46676269._076740.job.log.1
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas       357 Oct 12 17:57 output.list
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:57 runtime_log
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas   1894400 Oct 12 17:57 result.tar.gz
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 17:57 runtime_log.err
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas       655 Oct 12 17:57 QKdKDm748R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAZjNDmMPWcgn.diag
[2025-10-12 17:57:25] -rw-r--r--. 1 boincer umatlas     21300 Oct 12 17:57 stderr.txt
[2025-10-12 17:57:25] HITS file was successfully produced:
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas 193302181 Oct 12 17:55 shared/HITS.pool.root.1
[2025-10-12 17:57:25]  *** Contents of shared directory: ***
[2025-10-12 17:57:25] total 407612
[2025-10-12 17:57:25] -rw-r--r--. 2 boincer umatlas 221595158 Oct 12 14:54 ATLAS.root_0
[2025-10-12 17:57:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:54 start_atlas.sh
[2025-10-12 17:57:25] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 14:54 input.tar.gz
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas 193302181 Oct 12 17:55 HITS.pool.root.1
[2025-10-12 17:57:25] -rw-------. 1 boincer umatlas   1894400 Oct 12 17:57 result.tar.gz
17:57:26 (3291571): run_atlas exited; CPU time 34272.707184
17:57:26 (3291571): called boinc_finish(0)

</stderr_txt>
]]>

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