Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:04:26 (3491404): wrapper (7.7.26015): starting
14:04:26 (3491404): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:04:26] Arguments: --nthreads 8
[2025-10-12 14:04:26] Threads: 8
[2025-10-12 14:04:26] Checking for CVMFS
[2025-10-12 14:04:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:04:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:04:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:04:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:04:28] 2.13.2.0 8406 36841 84024 151630 2 135 25596276 40960001 25279 16776704 0 231482109 99.853 81848779 49341 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 14:04:28] CVMFS is ok
[2025-10-12 14:04:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:04:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:04:28] Further information can be found at the LHC@home message board.
[2025-10-12 14:04:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:04:28] Checking for apptainer binary...
[2025-10-12 14:04:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:04:28] Running /usr/bin/apptainer --version
[2025-10-12 14:04:28] apptainer version 1.4.3-1.el9
[2025-10-12 14:04:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:04:29] c-208-37.aglt2.org
[2025-10-12 14:04:29] apptainer works
[2025-10-12 14:04:29] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:04:29] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:04:29] Starting ATLAS job with PandaID=6840181815
[2025-10-12 14:04:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:13:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:13:11] 2025-10-12 20:12:19,453 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:13:11] 2025-10-12 20:12:19,453 | INFO     | sum of square deviations: 563028146.0983618
[2025-10-12 16:13:11] 2025-10-12 20:12:19,453 | INFO     | sum of deviations: 11294060065.606562
[2025-10-12 16:13:11] 2025-10-12 20:12:19,453 | INFO     | mean x: 1760296207.557377
[2025-10-12 16:13:11] 2025-10-12 20:12:19,453 | INFO     | mean y: 2501808.770491803
[2025-10-12 16:13:11] 2025-10-12 20:12:19,453 | INFO     | -- intersect: -35308150490.19865
[2025-10-12 16:13:11] 2025-10-12 20:12:19,453 | INFO     | intersect: -35308150490.19865
[2025-10-12 16:13:11] 2025-10-12 20:12:19,454 | INFO     | chi2: 3.1093122120172403
[2025-10-12 16:13:11] 2025-10-12 20:12:19,454 | INFO     | sum of square deviations: 496593807.69230723
[2025-10-12 16:13:11] 2025-10-12 20:12:19,454 | INFO     | sum of deviations: 11142249632.641016
[2025-10-12 16:13:11] 2025-10-12 20:12:19,454 | INFO     | mean x: 1760296055.0512822
[2025-10-12 16:13:11] 2025-10-12 20:12:19,454 | INFO     | mean y: 2501463.05982906
[2025-10-12 16:13:11] 2025-10-12 20:12:19,454 | INFO     | -- intersect: -39493879218.527985
[2025-10-12 16:13:11] 2025-10-12 20:12:19,454 | INFO     | intersect: -39493879218.527985
[2025-10-12 16:13:11] 2025-10-12 20:12:19,454 | INFO     | chi2: 3.117688344746311
[2025-10-12 16:13:11] 2025-10-12 20:12:19,454 | INFO     | current chi2=3.117688344746311 (change=-0.2693886029423963 %)
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | right removable region: 116
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | sum of square deviations: 496596858.5811954
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | sum of deviations: -19377409754.923073
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | mean x: 1760296360.059829
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | mean y: 2571589.846153846
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | -- intersect: 68690045683.888985
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | intersect: 68690045683.888985
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | chi2: 0.2157776624522254
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | current chi2=0.2157776624522254 (change=93.06027675129367 %)
[2025-10-12 16:13:11] 2025-10-12 20:12:19,455 | INFO     | sum of square deviations: 435607533.5625
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | sum of deviations: -21151409509.875004
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | mean x: 1760296512.5625
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | mean y: 2575835.410714286
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | -- intersect: 85475735795.51547
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | intersect: 85475735795.51547
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | chi2: 0.1459396222954924
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | current chi2=0.1459396222954924 (change=32.365741366855154 %)
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | sum of square deviations: 379841392.7663558
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | sum of deviations: -16311419653.177568
[2025-10-12 16:13:11] 2025-10-12 20:12:19,456 | INFO     | mean x: 1760296665.046729
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | mean y: 2562576.6355140186
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | -- intersect: 75594475844.83417
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | intersect: 75594475844.83417
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | chi2: 0.13284398720133211
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | current chi2=0.13284398720133211 (change=8.973323959715884 %)
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | left removable region: 30
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | sum of square deviations: 197199247.3953489
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | sum of deviations: -2488282643.2790694
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | mean x: 1760296939.5348837
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | mean y: 2518236.593023256
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | -- intersect: 22214146219.536453
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | intersect: 22214146219.536453
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | chi2: 0.02852538273487851
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | -- intersect: 22214146219.536453
[2025-10-12 16:13:11] 2025-10-12 20:12:19,457 | INFO     | current memory leak: -12.62 B/s (using 86 data points, chi2=0.03)
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | could have reported an average CPU frequency of 3656 MHz (8 samples)
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | ..............................
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | . Timing measurements:
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | . get job = 1 s
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | . initial setup = 7 s
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | . payload setup = 58 s
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | . stage-in = 0 s
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | . payload execution = 7434 s
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | . stage-out = 0 s
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | . log creation = 0 s
[2025-10-12 16:13:11] 2025-10-12 20:12:19,458 | INFO     | ..............................
[2025-10-12 16:13:11] 2025-10-12 20:12:19,525 | INFO     | 
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | job summary report
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | --------------------------------------------------
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | PanDA job id: 6840181815
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | task id: 46676269
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | errors: (none)
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | pilot state: finished 
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | transexitcode: 0
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | exeerrorcode: 0
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | exeerrordiag: 
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | exitcode: 0
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | exitmsg: OK
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | cpuconsumptiontime: 25988 s
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | nevents: 400
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | neventsw: 0
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | pid: 3513976
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | pgrp: 3513976
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | corecount: 8
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | event service: False
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 22: 2348913, 33: 2348941, 34: 2349259, 44: 2349415, 7497: 2377014, 7498: 2386012, 7500: 2386068, 7510: 2386262}
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | --------------------------------------------------
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | 
[2025-10-12 16:13:11] 2025-10-12 20:12:19,526 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,549 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:13:11] 2025-10-12 20:12:19,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:13:11] 2025-10-12 20:12:19,549 | INFO     | job 6840181815 has completed (purged errors)
[2025-10-12 16:13:11] 2025-10-12 20:12:19,549 | INFO     | overall cleanup function is called
[2025-10-12 16:13:11] 2025-10-12 20:12:20,556 | INFO     | --- collectZombieJob: --- 10, [3513976]
[2025-10-12 16:13:11] 2025-10-12 20:12:20,556 | INFO     | zombie collector waiting for pid 3513976
[2025-10-12 16:13:11] 2025-10-12 20:12:20,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:13:11] 2025-10-12 20:12:20,556 | INFO     | collected zombie processes
[2025-10-12 16:13:11] 2025-10-12 20:12:20,556 | INFO     | will attempt to kill all subprocesses of pid=3513976
[2025-10-12 16:13:11] 2025-10-12 20:12:21,002 | INFO     | process IDs to be killed: [3513976] (in reverse order)
[2025-10-12 16:13:11] 2025-10-12 20:12:21,204 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:13:11] 2025-10-12 20:12:21,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:13:11] 2025-10-12 20:12:21,223 | INFO     | did not find any defunct processes belonging to 3513976
[2025-10-12 16:13:11] 2025-10-12 20:12:21,242 | INFO     | did not find any defunct processes belonging to 3513976
[2025-10-12 16:13:11] 2025-10-12 20:12:21,242 | INFO     | ready for new job
[2025-10-12 16:13:11] 2025-10-12 20:12:21,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:13:11] 2025-10-12 20:12:21,244 | INFO     | ***************************************
[2025-10-12 16:13:11] 2025-10-12 20:12:21,244 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:13:11] 2025-10-12 20:12:21,244 | INFO     | ***************************************
[2025-10-12 16:13:11] 2025-10-12 20:12:21,244 | INFO     | 
[2025-10-12 16:13:11] 2025-10-12 20:12:21,256 | INFO     | architecture information:
[2025-10-12 16:13:11] 2025-10-12 20:12:21,257 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:13:11] 2025-10-12 20:12:21,282 | INFO     | cat /etc/os-release:
[2025-10-12 16:13:11] NAME="CentOS Linux"
[2025-10-12 16:13:11] VERSION="7 (Core)"
[2025-10-12 16:13:11] ID="centos"
[2025-10-12 16:13:11] ID_LIKE="rhel fedora"
[2025-10-12 16:13:11] VERSION_ID="7"
[2025-10-12 16:13:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:13:11] ANSI_COLOR="0;31"
[2025-10-12 16:13:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:13:11] HOME_URL="https://www.centos.org/"
[2025-10-12 16:13:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:13:11] 
[2025-10-12 16:13:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:13:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:13:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:13:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:13:11] 
[2025-10-12 16:13:11] 2025-10-12 20:12:21,282 | INFO     | ***************************************
[2025-10-12 16:13:11] 2025-10-12 20:12:21,785 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 16:13:11] 2025-10-12 20:12:21,844 | INFO     | sufficient remaining disk space (170065395712 B)
[2025-10-12 16:13:11] 2025-10-12 20:12:21,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:13:11] 2025-10-12 20:12:21,845 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:13:11] 2025-10-12 20:12:21,845 | INFO     | update_server=False
[2025-10-12 16:13:11] 2025-10-12 20:12:21,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:13:11] 2025-10-12 20:12:21,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:13:11] 2025-10-12 20:12:21,845 | INFO     | all data control threads have been joined
[2025-10-12 16:13:11] 2025-10-12 20:12:21,895 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:13:11] 2025-10-12 20:12:21,895 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:13:11] 2025-10-12 20:12:21,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:13:11] 2025-10-12 20:12:21,896 | INFO     | will abort loop
[2025-10-12 16:13:11] 2025-10-12 20:12:22,270 | INFO     | all job control threads have been joined
[2025-10-12 16:13:11] 2025-10-12 20:12:22,849 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:22,852 | INFO     | [data] control thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:22,886 | INFO     | all payload control threads have been joined
[2025-10-12 16:13:11] 2025-10-12 20:12:22,900 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:22,905 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:22,922 | INFO     | [job] validate thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:23,206 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:23,271 | INFO     | [job] control thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:23,724 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:23,851 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:23,891 | INFO     | [payload] control thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:24,165 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:24,214 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:24,281 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:24,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:13:11] 2025-10-12 20:12:25,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:13:11] 2025-10-12 20:12:25,550 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:29,116 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:32,900 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:13:11] 2025-10-12 20:12:33,914 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:13:11] 2025-10-12 20:12:51,642 | INFO     | PID=3496364 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:13:11] 2025-10-12 20:12:51,642 | INFO     | .. there are 22 such processes running
[2025-10-12 16:13:11] 2025-10-12 20:12:51,642 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:13:11] 2025-10-12 20:12:51,642 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:13:11] 2025-10-12 20:12:51,642 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:13:11] 2025-10-12 20:13:02,996 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:13:11] 2025-10-12 20:13:03,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634261919552)>', '<ExcThread(monitor, started 139633899837184)>']
[2025-10-12 16:13:11] 2025-10-12 20:13:03,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:13:11] 2025-10-12 20:13:03,721 | INFO     | [monitor] control thread has ended
[2025-10-12 16:13:11] 2025-10-12 20:13:08,099 | INFO     | all workflow threads have been joined
[2025-10-12 16:13:11] 2025-10-12 20:13:08,100 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:13:11] 2025-10-12 20:13:08,100 | INFO     | traces error code: 0
[2025-10-12 16:13:11] 2025-10-12 20:13:08,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:13:11] 2025-10-12 20:13:08,224 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:13:11] 2025-10-12 20:13:08,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:13:11] 2025-10-12 20:13:08,268 [wrapper] pilotpid: 3496364
[2025-10-12 16:13:11] 2025-10-12 20:13:08,279 [wrapper] Pilot exit status: 0
[2025-10-12 16:13:11] 2025-10-12 20:13:08,310 [wrapper] pandaids: 6840181815
[2025-10-12 16:13:11] 2025-10-12 20:13:08,412 [wrapper] cleanup supervisor_pilot 3930368 3496365
[2025-10-12 16:13:11] 2025-10-12 20:13:08,438 [wrapper] Test setup, not cleaning
[2025-10-12 16:13:11] 2025-10-12 20:13:08,441 [wrapper] apfmon messages muted
[2025-10-12 16:13:11] 2025-10-12 20:13:08,443 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:13:11] 2025-10-12 20:13:08,448 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:13:11]  *** Error codes and diagnostics ***
[2025-10-12 16:13:11]     "exeErrorCode": 0,
[2025-10-12 16:13:11]     "exeErrorDiag": "",
[2025-10-12 16:13:11]     "pilotErrorCode": 0,
[2025-10-12 16:13:11]     "pilotErrorDiag": "",
[2025-10-12 16:13:11]  *** Listing of results directory ***
[2025-10-12 16:13:11] total 414108
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:24 queuedata.json
[2025-10-12 16:13:11] -rwx------. 1 boincer umatlas     36292 Oct 12 10:25 runpilot2-wrapper.sh
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:13:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:04 run_atlas
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:04 job.xml
[2025-10-12 16:13:11] -rw-r--r--. 2 boincer umatlas 219525561 Oct 12 14:04 EVNT.46676267._004236.pool.root.1
[2025-10-12 16:13:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:04 start_atlas.sh
[2025-10-12 16:13:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:04 shared
[2025-10-12 16:13:11] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 14:04 input.tar.gz
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:04 boinc_lockfile
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:04 pandaJob.out
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas    975528 Oct 12 14:05 agis_schedconf.cvmfs.json
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:05 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:13:11] drwx------. 5 boincer umatlas      4096 Oct 12 14:05 pilot3
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas 197886757 Oct 12 16:11 HITS.46676269._080690.pool.root.1
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas       529 Oct 12 16:11 boinc_task_state.xml
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas      1049 Oct 12 16:12 memory_monitor_summary.json
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas        95 Oct 12 16:12 pilot_heartbeat.json
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas    356472 Oct 12 16:12 log.46676269._080690.job.log.tgz.1
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas      7813 Oct 12 16:12 heartbeat.json
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 16:12 init_data.xml
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas        27 Oct 12 16:13 wrapper_checkpoint.txt
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas      5083 Oct 12 16:13 pilotlog.txt
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas   1001682 Oct 12 16:13 log.46676269._080690.job.log.1
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas       357 Oct 12 16:13 output.list
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:13 runtime_log
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas   1382400 Oct 12 16:13 result.tar.gz
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 16:13 runtime_log.err
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas       657 Oct 12 16:13 FFvMDmlBCS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJFkNDmzAz8Wn.diag
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:13 boinc_mmap_file
[2025-10-12 16:13:11] -rw-r--r--. 1 boincer umatlas     21037 Oct 12 16:13 stderr.txt
[2025-10-12 16:13:11] HITS file was successfully produced:
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas 197886757 Oct 12 16:11 shared/HITS.pool.root.1
[2025-10-12 16:13:11]  *** Contents of shared directory: ***
[2025-10-12 16:13:11] total 409572
[2025-10-12 16:13:11] -rw-r--r--. 2 boincer umatlas 219525561 Oct 12 14:04 ATLAS.root_0
[2025-10-12 16:13:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:04 start_atlas.sh
[2025-10-12 16:13:11] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 14:04 input.tar.gz
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas 197886757 Oct 12 16:11 HITS.pool.root.1
[2025-10-12 16:13:11] -rw-------. 1 boincer umatlas   1382400 Oct 12 16:13 result.tar.gz
16:13:13 (3491404): run_atlas exited; CPU time 26181.288334
16:13:13 (3491404): called boinc_finish(0)

</stderr_txt>
]]>

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