Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:14:21 (1195718): wrapper (7.7.26015): starting
04:14:21 (1195718): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 04:14:21] Arguments: --nthreads 3
[2025-10-13 04:14:21] Threads: 3
[2025-10-13 04:14:21] Checking for CVMFS
[2025-10-13 04:14:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:14:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:14:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:14:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:14:45] 2.9.2.0 3005 3883 82652 151644 2 56 29476032 36864001 0 130560 0 3150350 99.991 140076 860 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 04:14:45] CVMFS is ok
[2025-10-13 04:14:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:14:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:14:45] Further information can be found at the LHC@home message board.
[2025-10-13 04:14:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:14:45] Checking for apptainer binary...
[2025-10-13 04:14:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:14:45] Running /usr/bin/apptainer --version
[2025-10-13 04:14:45] apptainer version 1.4.1-1.1
[2025-10-13 04:14:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:14:45] thA335b
[2025-10-13 04:14:45] apptainer works
[2025-10-13 04:14:45] Set ATHENA_PROC_NUMBER=3
[2025-10-13 04:14:45] Set ATHENA_CORE_NUMBER=3
[2025-10-13 04:14:45] Starting ATLAS job with PandaID=6839869937
[2025-10-13 04:14:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:35:13]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:35:13] 2025-10-13 03:34:41,996 | INFO     | did not find any defunct processes belonging to 1205877
[2025-10-13 05:35:13] 2025-10-13 03:34:41,997 | INFO     | did not find any defunct processes belonging to 1205877
[2025-10-13 05:35:13] 2025-10-13 03:34:41,997 | INFO     | ready for new job
[2025-10-13 05:35:13] 2025-10-13 03:34:41,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:35:13] 2025-10-13 03:34:41,998 | INFO     | ***************************************
[2025-10-13 05:35:13] 2025-10-13 03:34:41,998 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:35:13] 2025-10-13 03:34:41,998 | INFO     | ***************************************
[2025-10-13 05:35:13] 2025-10-13 03:34:41,998 | INFO     | 
[2025-10-13 05:35:13] 2025-10-13 03:34:41,999 | INFO     | architecture information:
[2025-10-13 05:35:13] 2025-10-13 03:34:41,999 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:35:13] 2025-10-13 03:34:42,007 | INFO     | cat /etc/os-release:
[2025-10-13 05:35:13] NAME="CentOS Linux"
[2025-10-13 05:35:13] VERSION="7 (Core)"
[2025-10-13 05:35:13] ID="centos"
[2025-10-13 05:35:13] ID_LIKE="rhel fedora"
[2025-10-13 05:35:13] VERSION_ID="7"
[2025-10-13 05:35:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:35:13] ANSI_COLOR="0;31"
[2025-10-13 05:35:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:35:13] HOME_URL="https://www.centos.org/"
[2025-10-13 05:35:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:35:13] 
[2025-10-13 05:35:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:35:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:35:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:35:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:35:13] 
[2025-10-13 05:35:13] 2025-10-13 03:34:42,007 | INFO     | ***************************************
[2025-10-13 05:35:13] 2025-10-13 03:34:42,510 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 05:35:13] 2025-10-13 03:34:42,523 | INFO     | sufficient remaining disk space (375422713856 B)
[2025-10-13 05:35:13] 2025-10-13 03:34:42,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:35:13] 2025-10-13 03:34:42,523 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:35:13] 2025-10-13 03:34:42,523 | INFO     | update_server=False
[2025-10-13 05:35:13] 2025-10-13 03:34:42,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:35:13] 2025-10-13 03:34:42,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:35:13] 2025-10-13 03:34:42,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:35:13] 2025-10-13 03:34:42,523 | INFO     | aborting loop
[2025-10-13 05:35:13] 2025-10-13 03:34:43,090 | INFO     | all data control threads have been joined
[2025-10-13 05:35:13] 2025-10-13 03:34:43,529 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:43,529 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:43,529 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:43,679 | INFO     | all payload control threads have been joined
[2025-10-13 05:35:13] 2025-10-13 03:34:43,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:35:13] 2025-10-13 03:34:43,785 | INFO     | all job control threads have been joined
[2025-10-13 05:35:13] 2025-10-13 03:34:43,932 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:44,011 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:44,096 | INFO     | [data] control thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:44,241 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:44,255 | INFO     | [job] validate thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:44,319 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:44,404 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:44,685 | INFO     | [payload] control thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:44,791 | INFO     | [job] control thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:45,130 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:45,718 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:45,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:35:13] 2025-10-13 03:34:49,960 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:52,770 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:35:13] 2025-10-13 03:34:53,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:35:13] 2025-10-13 03:34:56,872 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:35:13] 2025-10-13 03:34:57,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065389569856)>', '<ExcThread(monitor, started 140064889747200)>']
[2025-10-13 05:35:13] 2025-10-13 03:35:02,626 | INFO     | all workflow threads have been joined
[2025-10-13 05:35:13] 2025-10-13 03:35:02,627 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:35:13] 2025-10-13 03:35:02,627 | INFO     | traces error code: 0
[2025-10-13 05:35:13] 2025-10-13 03:35:02,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:35:13] 2025-10-13 03:35:12,907 | INFO     | PID=1199441 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:35:13] 2025-10-13 03:35:12,908 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:35:13] 2025-10-13 03:35:12,908 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:35:13] 2025-10-13 03:35:12,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:35:13] 2025-10-13 03:35:12,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:35:13] 2025-10-13 03:35:12,908 | INFO     | [monitor] control thread has ended
[2025-10-13 05:35:13] 2025-10-13 03:35:12,954 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:35:13] 2025-10-13 03:35:12,956 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:35:13] 2025-10-13 03:35:12,958 [wrapper] pilotpid: 1199441
[2025-10-13 05:35:13] 2025-10-13 03:35:12,961 [wrapper] Pilot exit status: 0
[2025-10-13 05:35:13] 2025-10-13 03:35:12,968 [wrapper] pandaids: 6839869937
[2025-10-13 05:35:13] 2025-10-13 03:35:12,983 [wrapper] cleanup supervisor_pilot 1217796 1199442
[2025-10-13 05:35:13] 2025-10-13 03:35:12,986 [wrapper] Test setup, not cleaning
[2025-10-13 05:35:13] 2025-10-13 03:35:12,988 [wrapper] apfmon messages muted
[2025-10-13 05:35:13] 2025-10-13 03:35:12,991 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:35:13] 2025-10-13 03:35:12,993 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:35:13]  *** Error codes and diagnostics ***
[2025-10-13 05:35:13]     "exeErrorCode": 0,
[2025-10-13 05:35:13]     "exeErrorDiag": "",
[2025-10-13 05:35:13]     "pilotErrorCode": 0,
[2025-10-13 05:35:13]     "pilotErrorDiag": "",
[2025-10-13 05:35:13]  *** Listing of results directory ***
[2025-10-13 05:35:13] total 408756
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:57 pilot3.tar.gz
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:11 queuedata.json
[2025-10-13 05:35:13] -rwx------ 1 boinc boinc     36292 Oct 12 13:12 runpilot2-wrapper.sh
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc       100 Oct 13 04:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:35:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 04:14 run_atlas
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc       105 Oct 13 04:14 job.xml
[2025-10-13 05:35:13] -rw-r--r-- 2 boinc boinc 219919663 Oct 13 04:14 EVNT.46676267._003668.pool.root.1
[2025-10-13 05:35:13] drwxrwx--x 2 boinc boinc      4096 Oct 13 04:14 shared
[2025-10-13 05:35:13] -rw-r--r-- 2 boinc boinc    569679 Oct 13 04:14 input.tar.gz
[2025-10-13 05:35:13] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:14 start_atlas.sh
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:14 boinc_setup_complete
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc      6445 Oct 13 04:14 init_data.xml
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:14 boinc_lockfile
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc      2550 Oct 13 04:14 pandaJob.out
[2025-10-13 05:35:13] -rw------- 1 boinc boinc    975595 Oct 13 04:14 agis_schedconf.cvmfs.json
[2025-10-13 05:35:13] -rw------- 1 boinc boinc   1560580 Oct 13 04:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:35:13] drwx------ 5 boinc boinc      4096 Oct 13 04:14 pilot3
[2025-10-13 05:35:13] -rw------- 1 boinc boinc        95 Oct 13 05:34 pilot_heartbeat.json
[2025-10-13 05:35:13] -rw------- 1 boinc boinc 192826643 Oct 13 05:34 HITS.46676269._076911.pool.root.1
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc       529 Oct 13 05:34 boinc_task_state.xml
[2025-10-13 05:35:13] -rw------- 1 boinc boinc      1017 Oct 13 05:34 memory_monitor_summary.json
[2025-10-13 05:35:13] -rw------- 1 boinc boinc    260350 Oct 13 05:34 log.46676269._076911.job.log.tgz.1
[2025-10-13 05:35:13] -rw------- 1 boinc boinc      7747 Oct 13 05:34 heartbeat.json
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:34 boinc_mmap_file
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc        27 Oct 13 05:34 wrapper_checkpoint.txt
[2025-10-13 05:35:13] -rw------- 1 boinc boinc       747 Oct 13 05:35 pilotlog.txt
[2025-10-13 05:35:13] -rw------- 1 boinc boinc    704916 Oct 13 05:35 log.46676269._076911.job.log.1
[2025-10-13 05:35:13] -rw------- 1 boinc boinc       357 Oct 13 05:35 output.list
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:35 runtime_log
[2025-10-13 05:35:13] -rw------- 1 boinc boinc    983040 Oct 13 05:35 result.tar.gz
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc      8782 Oct 13 05:35 runtime_log.err
[2025-10-13 05:35:13] -rw------- 1 boinc boinc       659 Oct 13 05:35 6gsKDm9A9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlbjNDm6I3SLo.diag
[2025-10-13 05:35:13] -rw-r--r-- 1 boinc boinc      9847 Oct 13 05:35 stderr.txt
[2025-10-13 05:35:13] HITS file was successfully produced:
[2025-10-13 05:35:13] -rw------- 1 boinc boinc 192826643 Oct 13 05:34 shared/HITS.pool.root.1
[2025-10-13 05:35:13]  *** Contents of shared directory: ***
[2025-10-13 05:35:13] total 404620
[2025-10-13 05:35:13] -rw-r--r-- 2 boinc boinc 219919663 Oct 13 04:14 ATLAS.root_0
[2025-10-13 05:35:13] -rw-r--r-- 2 boinc boinc    569679 Oct 13 04:14 input.tar.gz
[2025-10-13 05:35:13] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:14 start_atlas.sh
[2025-10-13 05:35:13] -rw------- 1 boinc boinc 192826643 Oct 13 05:34 HITS.pool.root.1
[2025-10-13 05:35:13] -rw------- 1 boinc boinc    983040 Oct 13 05:35 result.tar.gz
05:35:14 (1195718): run_atlas exited; CPU time 13744.403706
05:35:14 (1195718): called boinc_finish(0)

</stderr_txt>
]]>

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