Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:54:25 (260448): wrapper (7.7.26015): starting
10:54:25 (260448): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:54:25] Arguments: --nthreads 8
[2025-10-12 10:54:25] Threads: 8
[2025-10-12 10:54:25] Checking for CVMFS
[2025-10-12 10:54:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:54:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:54:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:54:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:54:26] 2.11.3.0 1849 30245 197860 151630 1 45 36240333 45568000 13674 130560 0 217646624 99.867 78052873 17375 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 10:54:26] CVMFS is ok
[2025-10-12 10:54:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:54:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:54:26] Further information can be found at the LHC@home message board.
[2025-10-12 10:54:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:54:26] Checking for apptainer binary...
[2025-10-12 10:54:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:54:26] Running /usr/bin/apptainer --version
[2025-10-12 10:54:26] apptainer version 1.4.1-1.el9
[2025-10-12 10:54:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:54:27] wns0023.triumf.lcg
[2025-10-12 10:54:27] apptainer works
[2025-10-12 10:54:27] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:54:27] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:54:27] Starting ATLAS job with PandaID=6840390602
[2025-10-12 10:54:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:01:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | WARNING  | wrong length of table data, x=[1760291803.0, 1760291864.0], y=[3394.0, 492661.0] (must be same and length>=4)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | ..............................
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | . Timing measurements:
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | . get job = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | . initial setup = 6 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . payload setup = 24 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . stage-in = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . payload execution = 99 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . stage-out = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . log creation = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | ..............................
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840390602/pilotlog.txt
[2025-10-12 11:01:16] 2025-10-12 18:00:37,544 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 11:01:16] - Log from pilotlog.txt -
[2025-10-12 11:01:16] 2025-10-12 18:00:37,486 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840390602/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | INFO     | extracted standard info from prmon json
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | WARNING  | wrong length of table data, x=[1760291803.0, 1760291864.0], y=[3394.0, 492661.0] (must be same and length>=4)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | ..............................
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | . Timing measurements:
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | . get job = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | . initial setup = 6 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . payload setup = 24 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . stage-in = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . payload execution = 99 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . stage-out = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . log creation = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | ..............................
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840390602/pilotlog.txt
[2025-10-12 11:01:16] 2025-10-12 18:00:37,545 | WARNING  | 
[2025-10-12 11:01:16] [begin log extracts]
[2025-10-12 11:01:16] - Log from pilotlog.txt -
[2025-10-12 11:01:16] 2025-10-12 18:00:37,486 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840390602/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | INFO     | extracted standard info from prmon json
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:01:16] 2025-10-12 18:00:37,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | WARNING  | wrong length of table data, x=[1760291803.0, 1760291864.0], y=[3394.0, 492661.0] (must be same and length>=4)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | ..............................
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | . Timing measurements:
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | . get job = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,488 | INFO     | . initial setup = 6 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . payload setup = 24 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . stage-in = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . payload execution = 99 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . stage-out = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | . log creation = 0 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | ..............................
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 11:01:16] 2025-10-12 18:00:37,489 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840390602/pilotlog.txt
[2025-10-12 11:01:16] [end log extracts]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,545 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,545 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 11:01:16] 2025-10-12 18:00:37,582 | INFO     | time since job start (327s) is within the limit (172800.0s)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,815 | INFO     | 
[2025-10-12 11:01:16] 2025-10-12 18:00:37,817 | INFO     | job summary report
[2025-10-12 11:01:16] 2025-10-12 18:00:37,817 | INFO     | --------------------------------------------------
[2025-10-12 11:01:16] 2025-10-12 18:00:37,817 | INFO     | PanDA job id: 6840390602
[2025-10-12 11:01:16] 2025-10-12 18:00:37,817 | INFO     | task id: 46676269
[2025-10-12 11:01:16] 2025-10-12 18:00:37,817 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 10:57:57,471 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 11:01:16] 2025-10-12 18:00:37,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:01:16] 2025-10-12 18:00:37,818 | INFO     | pilot state: failed 
[2025-10-12 11:01:16] 2025-10-12 18:00:37,818 | INFO     | transexitcode: 65
[2025-10-12 11:01:16] 2025-10-12 18:00:37,818 | INFO     | exeerrorcode: 65
[2025-10-12 11:01:16] 2025-10-12 18:00:37,833 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,833 | INFO     | exitcode: 65
[2025-10-12 11:01:16] 2025-10-12 18:00:37,833 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,833 | INFO     | cpuconsumptiontime: 21 s
[2025-10-12 11:01:16] 2025-10-12 18:00:37,833 | INFO     | nevents: 0
[2025-10-12 11:01:16] 2025-10-12 18:00:37,834 | INFO     | neventsw: 0
[2025-10-12 11:01:16] 2025-10-12 18:00:37,834 | INFO     | pid: 270991
[2025-10-12 11:01:16] 2025-10-12 18:00:37,834 | INFO     | pgrp: 270991
[2025-10-12 11:01:16] 2025-10-12 18:00:37,834 | INFO     | corecount: 8
[2025-10-12 11:01:16] 2025-10-12 18:00:37,834 | INFO     | event service: False
[2025-10-12 11:01:16] 2025-10-12 18:00:37,834 | INFO     | sizes: {0: 2348029, 1: 2348711, 2: 2348910, 13: 2348910, 24: 2349256, 35: 2349256, 127: 2372721, 128: 2377013, 131: 2377069, 275: 2377263}
[2025-10-12 11:01:16] 2025-10-12 18:00:37,834 | INFO     | --------------------------------------------------
[2025-10-12 11:01:16] 2025-10-12 18:00:37,834 | INFO     | 
[2025-10-12 11:01:16] 2025-10-12 18:00:37,834 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 11:01:16] 2025-10-12 18:00:37,849 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,849 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,849 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,852 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:01:16] 2025-10-12 18:00:37,852 | INFO     | job 6840390602 has completed (purged errors)
[2025-10-12 11:01:16] 2025-10-12 18:00:37,852 | INFO     | overall cleanup function is called
[2025-10-12 11:01:16] 2025-10-12 18:00:38,860 | INFO     | --- collectZombieJob: --- 10, [270991]
[2025-10-12 11:01:16] 2025-10-12 18:00:38,861 | INFO     | zombie collector waiting for pid 270991
[2025-10-12 11:01:16] 2025-10-12 18:00:38,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:01:16] 2025-10-12 18:00:38,861 | INFO     | collected zombie processes
[2025-10-12 11:01:16] 2025-10-12 18:00:38,861 | INFO     | will attempt to kill all subprocesses of pid=270991
[2025-10-12 11:01:16] 2025-10-12 18:00:39,273 | INFO     | process IDs to be killed: [270991] (in reverse order)
[2025-10-12 11:01:16] 2025-10-12 18:00:39,414 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:01:16] 2025-10-12 18:00:39,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:01:16] 2025-10-12 18:00:39,424 | INFO     | did not find any defunct processes belonging to 270991
[2025-10-12 11:01:16] 2025-10-12 18:00:39,431 | INFO     | did not find any defunct processes belonging to 270991
[2025-10-12 11:01:16] 2025-10-12 18:00:39,431 | INFO     | ready for new job
[2025-10-12 11:01:16] 2025-10-12 18:00:39,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:01:16] 2025-10-12 18:00:39,435 | INFO     | ***************************************
[2025-10-12 11:01:16] 2025-10-12 18:00:39,435 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:01:16] 2025-10-12 18:00:39,435 | INFO     | ***************************************
[2025-10-12 11:01:16] 2025-10-12 18:00:39,435 | INFO     | 
[2025-10-12 11:01:16] 2025-10-12 18:00:39,437 | INFO     | architecture information:
[2025-10-12 11:01:16] 2025-10-12 18:00:39,438 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:01:16] 2025-10-12 18:00:39,453 | INFO     | cat /etc/os-release:
[2025-10-12 11:01:16] NAME="CentOS Linux"
[2025-10-12 11:01:16] VERSION="7 (Core)"
[2025-10-12 11:01:16] ID="centos"
[2025-10-12 11:01:16] ID_LIKE="rhel fedora"
[2025-10-12 11:01:16] VERSION_ID="7"
[2025-10-12 11:01:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:01:16] ANSI_COLOR="0;31"
[2025-10-12 11:01:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:01:16] HOME_URL="https://www.centos.org/"
[2025-10-12 11:01:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:01:16] 
[2025-10-12 11:01:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:01:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:01:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:01:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:01:16] 
[2025-10-12 11:01:16] 2025-10-12 18:00:39,453 | INFO     | ***************************************
[2025-10-12 11:01:16] 2025-10-12 18:00:39,956 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 11:01:16] 2025-10-12 18:00:39,995 | INFO     | sufficient remaining disk space (1204530708480 B)
[2025-10-12 11:01:16] 2025-10-12 18:00:39,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:01:16] 2025-10-12 18:00:39,996 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:01:16] 2025-10-12 18:00:39,996 | INFO     | update_server=False
[2025-10-12 11:01:16] 2025-10-12 18:00:39,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:01:16] 2025-10-12 18:00:39,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:01:16] 2025-10-12 18:00:39,996 | INFO     | aborting loop
[2025-10-12 11:01:16] 2025-10-12 18:00:39,997 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:01:16] 2025-10-12 18:00:40,088 | INFO     | all job control threads have been joined
[2025-10-12 11:01:16] 2025-10-12 18:00:40,290 | INFO     | all payload control threads have been joined
[2025-10-12 11:01:16] 2025-10-12 18:00:40,443 | INFO     | all data control threads have been joined
[2025-10-12 11:01:16] 2025-10-12 18:00:41,002 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:41,016 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:41,094 | INFO     | [job] control thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:41,296 | INFO     | [payload] control thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:41,311 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:41,311 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:41,449 | INFO     | [data] control thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:41,499 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:41,579 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:41,978 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:42,004 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:42,154 | INFO     | [job] validate thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:42,176 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:42,504 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:42,655 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:01:16] 2025-10-12 18:00:43,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:01:16] 2025-10-12 18:00:43,661 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:00:47,504 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:01:16] 2025-10-12 18:01:09,958 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:01:16] 2025-10-12 18:01:11,066 | INFO     | PID=264193 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 11:01:16] 2025-10-12 18:01:11,067 | INFO     | .. there are 26 such processes running
[2025-10-12 11:01:16] 2025-10-12 18:01:11,067 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:01:16] 2025-10-12 18:01:11,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:01:16] 2025-10-12 18:01:11,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:01:16] 2025-10-12 18:01:11,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140150199973696)>', '<ExcThread(monitor, started 140149656635136)>']
[2025-10-12 11:01:16] 2025-10-12 18:01:12,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:01:16] 2025-10-12 18:01:12,073 | INFO     | [monitor] control thread has ended
[2025-10-12 11:01:16] 2025-10-12 18:01:16,185 | INFO     | all workflow threads have been joined
[2025-10-12 11:01:16] 2025-10-12 18:01:16,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:01:16] 2025-10-12 18:01:16,185 | INFO     | traces error code: 0
[2025-10-12 11:01:16] 2025-10-12 18:01:16,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:01:16] 2025-10-12 18:01:16,281 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:01:16] 2025-10-12 18:01:16,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:01:16] 2025-10-12 18:01:16,284 [wrapper] pilotpid: 264193
[2025-10-12 11:01:16] 2025-10-12 18:01:16,286 [wrapper] Pilot exit status: 0
[2025-10-12 11:01:16] 2025-10-12 18:01:16,337 [wrapper] pandaids: 6840390602
[2025-10-12 11:01:16] 2025-10-12 18:01:16,499 [wrapper] cleanup supervisor_pilot  264199 264194
[2025-10-12 11:01:16] 2025-10-12 18:01:16,510 [wrapper] Test setup, not cleaning
[2025-10-12 11:01:16] 2025-10-12 18:01:16,522 [wrapper] apfmon messages muted
[2025-10-12 11:01:16] 2025-10-12 18:01:16,545 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:01:16] 2025-10-12 18:01:16,549 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:01:16]  *** Error codes and diagnostics ***
[2025-10-12 11:01:16]     "exeErrorCode": 65,
[2025-10-12 11:01:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 11:01:16]     "pilotErrorCode": 1305,
[2025-10-12 11:01:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 11:01:16]  *** Listing of results directory ***
[2025-10-12 11:01:16] total 222228
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc    557409 Oct 12 09:01 pilot3.tar.gz
[2025-10-12 11:01:16] -rwx------. 1 boinc boinc     36292 Oct 12 09:23 runpilot2-wrapper.sh
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc      5112 Oct 12 09:23 queuedata.json
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc       100 Oct 12 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:01:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 10:54 run_atlas
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc       105 Oct 12 10:54 job.xml
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc      6444 Oct 12 10:54 init_data.xml
[2025-10-12 11:01:16] -rw-r--r--. 2 boinc boinc 223408436 Oct 12 10:54 EVNT.46676267._004739.pool.root.1
[2025-10-12 11:01:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 10:54 start_atlas.sh
[2025-10-12 11:01:16] drwxrwx--x. 2 boinc boinc      4096 Oct 12 10:54 shared
[2025-10-12 11:01:16] -rw-r--r--. 2 boinc boinc    569675 Oct 12 10:54 input.tar.gz
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc         0 Oct 12 10:54 boinc_lockfile
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc      2550 Oct 12 10:54 pandaJob.out
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc    975528 Oct 12 10:55 agis_schedconf.cvmfs.json
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc   1560580 Oct 12 10:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:01:16] drwx------. 5 boinc boinc      4096 Oct 12 10:55 pilot3
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc       524 Oct 12 10:57 boinc_task_state.xml
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc      1009 Oct 12 10:58 memory_monitor_summary.json
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc     23728 Oct 12 10:58 log.46676269._083434.job.log.tgz.1
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc      8439 Oct 12 11:00 heartbeat.json
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc        95 Oct 12 11:01 pilot_heartbeat.json
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc        23 Oct 12 11:01 wrapper_checkpoint.txt
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc      8192 Oct 12 11:01 boinc_mmap_file
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc      4822 Oct 12 11:01 pilotlog.txt
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc    101872 Oct 12 11:01 log.46676269._083434.job.log.1
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc       188 Oct 12 11:01 output.list
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc       620 Oct 12 11:01 runtime_log
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc    143360 Oct 12 11:01 result.tar.gz
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc      8526 Oct 12 11:01 runtime_log.err
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc       647 Oct 12 11:01 PsMODmG2DS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWckNDmpwxszn.diag
[2025-10-12 11:01:16] -rw-r--r--. 1 boinc boinc     21890 Oct 12 11:01 stderr.txt
[2025-10-12 11:01:16] No HITS result produced
[2025-10-12 11:01:16]  *** Contents of shared directory: ***
[2025-10-12 11:01:16] total 218896
[2025-10-12 11:01:16] -rw-r--r--. 2 boinc boinc 223408436 Oct 12 10:54 ATLAS.root_0
[2025-10-12 11:01:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 10:54 start_atlas.sh
[2025-10-12 11:01:16] -rw-r--r--. 2 boinc boinc    569675 Oct 12 10:54 input.tar.gz
[2025-10-12 11:01:16] -rw-------. 1 boinc boinc    143360 Oct 12 11:01 result.tar.gz
11:01:18 (260448): run_atlas exited; CPU time 31.024508
11:01:18 (260448): called boinc_finish(0)

</stderr_txt>
]]>

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