Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:01:41 (1543657): wrapper (7.7.26015): starting
14:01:41 (1543657): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:01:41] Arguments: --nthreads 8
[2025-10-12 14:01:41] Threads: 8
[2025-10-12 14:01:41] Checking for CVMFS
[2025-10-12 14:01:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:01:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:01:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:01:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:01:42] 2.13.2.0 1923533 130878 421696 151630 2 370 31902563 32935936 40510 16776704 0 435745922 99.654 387671248 17176 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 14:01:42] CVMFS is ok
[2025-10-12 14:01:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:01:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:01:42] Further information can be found at the LHC@home message board.
[2025-10-12 14:01:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:01:42] Checking for apptainer binary...
[2025-10-12 14:01:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:01:42] Running /usr/bin/apptainer --version
[2025-10-12 14:01:42] apptainer version 1.4.3-1.el9
[2025-10-12 14:01:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:01:42] c7-3-17.aglt2.org
[2025-10-12 14:01:42] apptainer works
[2025-10-12 14:01:42] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:01:42] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:01:42] Starting ATLAS job with PandaID=6840181313
[2025-10-12 14:01:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:35:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:35:38] 2025-10-12 21:34:54,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,282 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 17:35:38] 2025-10-12 21:34:56,295 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3129.938854166665
[2025-10-12 17:35:38] 2025-10-12 21:34:56,363 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840181313/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,363 | INFO     | extracted standard info from prmon json
[2025-10-12 17:35:38] 2025-10-12 21:34:56,363 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:35:38] 2025-10-12 21:34:56,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:35:38] 2025-10-12 21:34:56,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:35:38] 2025-10-12 21:34:56,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:35:38] 2025-10-12 21:34:56,371 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:35:38] 2025-10-12 21:34:56,372 | INFO     | sum of square deviations: 2831045672.1531034
[2025-10-12 17:35:38] 2025-10-12 21:34:56,373 | INFO     | sum of deviations: -16583371883.69379
[2025-10-12 17:35:38] 2025-10-12 21:34:56,373 | INFO     | mean x: 1760298514.2057416
[2025-10-12 17:35:38] 2025-10-12 21:34:56,373 | INFO     | mean y: 2387059.411483254
[2025-10-12 17:35:38] 2025-10-12 21:34:56,373 | INFO     | -- intersect: 10313660089.911982
[2025-10-12 17:35:38] 2025-10-12 21:34:56,373 | INFO     | intersect: 10313660089.911982
[2025-10-12 17:35:38] 2025-10-12 21:34:56,374 | INFO     | chi2: 3.0512839754099605
[2025-10-12 17:35:38] 2025-10-12 21:34:56,374 | INFO     | sum of square deviations: 2632710881.9362817
[2025-10-12 17:35:38] 2025-10-12 21:34:56,375 | INFO     | sum of deviations: -3220532726.980381
[2025-10-12 17:35:38] 2025-10-12 21:34:56,375 | INFO     | mean x: 1760298361.7107842
[2025-10-12 17:35:38] 2025-10-12 21:34:56,375 | INFO     | mean y: 2397155.6274509802
[2025-10-12 17:35:38] 2025-10-12 21:34:56,375 | INFO     | -- intersect: 2155728355.812286
[2025-10-12 17:35:38] 2025-10-12 21:34:56,375 | INFO     | intersect: 2155728355.812286
[2025-10-12 17:35:38] 2025-10-12 21:34:56,376 | INFO     | chi2: 2.389132231163997
[2025-10-12 17:35:38] 2025-10-12 21:34:56,376 | INFO     | current chi2=2.389132231163997 (change=21.700757765655002 %)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,376 | INFO     | right removable region: 203
[2025-10-12 17:35:38] 2025-10-12 21:34:56,376 | INFO     | sum of square deviations: 2632684651.9362817
[2025-10-12 17:35:38] 2025-10-12 21:34:56,377 | INFO     | sum of deviations: -57994836812.49997
[2025-10-12 17:35:38] 2025-10-12 21:34:56,377 | INFO     | mean x: 1760298666.7107842
[2025-10-12 17:35:38] 2025-10-12 21:34:56,377 | INFO     | mean y: 2418653.5
[2025-10-12 17:35:38] 2025-10-12 21:34:56,378 | INFO     | -- intersect: 38779654598.59109
[2025-10-12 17:35:38] 2025-10-12 21:34:56,378 | INFO     | intersect: 38779654598.59109
[2025-10-12 17:35:38] 2025-10-12 21:34:56,378 | INFO     | chi2: 0.9280162738086166
[2025-10-12 17:35:38] 2025-10-12 21:34:56,378 | INFO     | current chi2=0.9280162738086166 (change=69.58604045747883 %)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,378 | INFO     | sum of square deviations: 2443812181.708536
[2025-10-12 17:35:38] 2025-10-12 21:34:56,379 | INFO     | sum of deviations: -57394936319.090454
[2025-10-12 17:35:38] 2025-10-12 21:34:56,379 | INFO     | mean x: 1760298819.2160804
[2025-10-12 17:35:38] 2025-10-12 21:34:56,379 | INFO     | mean y: 2418119.6532663316
[2025-10-12 17:35:38] 2025-10-12 21:34:56,379 | INFO     | -- intersect: 41344481715.08172
[2025-10-12 17:35:38] 2025-10-12 21:34:56,380 | INFO     | intersect: 41344481715.08172
[2025-10-12 17:35:38] 2025-10-12 21:34:56,380 | INFO     | chi2: 0.9001602873434441
[2025-10-12 17:35:38] 2025-10-12 21:34:56,380 | INFO     | current chi2=0.9001602873434441 (change=3.0016700408550387 %)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,380 | INFO     | left removable region: 20
[2025-10-12 17:35:38] 2025-10-12 21:34:56,380 | INFO     | sum of square deviations: 1900505920.8961747
[2025-10-12 17:35:38] 2025-10-12 21:34:56,381 | INFO     | sum of deviations: -32739013065.797817
[2025-10-12 17:35:38] 2025-10-12 21:34:56,381 | INFO     | mean x: 1760298941.2349727
[2025-10-12 17:35:38] 2025-10-12 21:34:56,381 | INFO     | mean y: 2419966.43715847
[2025-10-12 17:35:38] 2025-10-12 21:34:56,382 | INFO     | -- intersect: 30326161346.64105
[2025-10-12 17:35:38] 2025-10-12 21:34:56,382 | INFO     | intersect: 30326161346.64105
[2025-10-12 17:35:38] 2025-10-12 21:34:56,382 | INFO     | chi2: 0.19633223978099607
[2025-10-12 17:35:38] 2025-10-12 21:34:56,382 | INFO     | -- intersect: 30326161346.64105
[2025-10-12 17:35:38] 2025-10-12 21:34:56,382 | INFO     | current memory leak: -17.23 B/s (using 183 data points, chi2=0.20)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | could have reported an average CPU frequency of 3061 MHz (10 samples)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | ..............................
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | . Timing measurements:
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | . get job = 0 s
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | . initial setup = 3 s
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | . payload setup = 13 s
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | . stage-in = 0 s
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | . payload execution = 12708 s
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | . stage-out = 4 s
[2025-10-12 17:35:38] 2025-10-12 21:34:56,387 | INFO     | . log creation = 0 s
[2025-10-12 17:35:38] 2025-10-12 21:34:56,388 | INFO     | ..............................
[2025-10-12 17:35:38] 2025-10-12 21:34:56,464 | INFO     | 
[2025-10-12 17:35:38] 2025-10-12 21:34:56,464 | INFO     | job summary report
[2025-10-12 17:35:38] 2025-10-12 21:34:56,464 | INFO     | --------------------------------------------------
[2025-10-12 17:35:38] 2025-10-12 21:34:56,464 | INFO     | PanDA job id: 6840181313
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | task id: 46676269
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | errors: (none)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | pilot state: finished 
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | transexitcode: 0
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | exeerrorcode: 0
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | exeerrordiag: 
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | exitcode: 0
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | exitmsg: OK
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | cpuconsumptiontime: 36292 s
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | nevents: 400
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | neventsw: 0
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | pid: 1554631
[2025-10-12 17:35:38] 2025-10-12 21:34:56,465 | INFO     | pgrp: 1554631
[2025-10-12 17:35:38] 2025-10-12 21:34:56,466 | INFO     | corecount: 8
[2025-10-12 17:35:38] 2025-10-12 21:34:56,466 | INFO     | event service: False
[2025-10-12 17:35:38] 2025-10-12 21:34:56,466 | INFO     | sizes: {0: 2348857, 10: 2349119, 11: 2349147, 12726: 2378943, 12727: 2378942, 12732: 2387996, 12733: 2388180, 12748: 2388374}
[2025-10-12 17:35:38] 2025-10-12 21:34:56,466 | INFO     | --------------------------------------------------
[2025-10-12 17:35:38] 2025-10-12 21:34:56,466 | INFO     | 
[2025-10-12 17:35:38] 2025-10-12 21:34:56,466 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 17:35:38] 2025-10-12 21:34:56,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,597 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,597 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:35:38] 2025-10-12 21:34:56,597 | INFO     | job 6840181313 has completed (purged errors)
[2025-10-12 17:35:38] 2025-10-12 21:34:56,597 | INFO     | overall cleanup function is called
[2025-10-12 17:35:38] 2025-10-12 21:34:57,608 | INFO     | --- collectZombieJob: --- 10, [1554631]
[2025-10-12 17:35:38] 2025-10-12 21:34:57,608 | INFO     | zombie collector waiting for pid 1554631
[2025-10-12 17:35:38] 2025-10-12 21:34:57,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:35:38] 2025-10-12 21:34:57,609 | INFO     | collected zombie processes
[2025-10-12 17:35:38] 2025-10-12 21:34:57,609 | INFO     | will attempt to kill all subprocesses of pid=1554631
[2025-10-12 17:35:38] 2025-10-12 21:34:58,703 | INFO     | process IDs to be killed: [1554631] (in reverse order)
[2025-10-12 17:35:38] 2025-10-12 21:34:58,989 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:35:38] 2025-10-12 21:34:58,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:35:38] 2025-10-12 21:34:59,025 | INFO     | did not find any defunct processes belonging to 1554631
[2025-10-12 17:35:38] 2025-10-12 21:34:59,048 | INFO     | did not find any defunct processes belonging to 1554631
[2025-10-12 17:35:38] 2025-10-12 21:34:59,048 | INFO     | ready for new job
[2025-10-12 17:35:38] 2025-10-12 21:34:59,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:35:38] 2025-10-12 21:34:59,050 | INFO     | ***************************************
[2025-10-12 17:35:38] 2025-10-12 21:34:59,050 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:35:38] 2025-10-12 21:34:59,051 | INFO     | ***************************************
[2025-10-12 17:35:38] 2025-10-12 21:34:59,051 | INFO     | 
[2025-10-12 17:35:38] 2025-10-12 21:34:59,078 | INFO     | architecture information:
[2025-10-12 17:35:38] 2025-10-12 21:34:59,082 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:35:38] 2025-10-12 21:34:59,125 | INFO     | cat /etc/os-release:
[2025-10-12 17:35:38] NAME="CentOS Linux"
[2025-10-12 17:35:38] VERSION="7 (Core)"
[2025-10-12 17:35:38] ID="centos"
[2025-10-12 17:35:38] ID_LIKE="rhel fedora"
[2025-10-12 17:35:38] VERSION_ID="7"
[2025-10-12 17:35:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:35:38] ANSI_COLOR="0;31"
[2025-10-12 17:35:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:35:38] HOME_URL="https://www.centos.org/"
[2025-10-12 17:35:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:35:38] 
[2025-10-12 17:35:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:35:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:35:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:35:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:35:38] 
[2025-10-12 17:35:38] 2025-10-12 21:34:59,125 | INFO     | ***************************************
[2025-10-12 17:35:38] 2025-10-12 21:34:59,628 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 17:35:38] 2025-10-12 21:34:59,745 | INFO     | sufficient remaining disk space (73565995008 B)
[2025-10-12 17:35:38] 2025-10-12 21:34:59,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:35:38] 2025-10-12 21:34:59,746 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:35:38] 2025-10-12 21:34:59,746 | INFO     | update_server=False
[2025-10-12 17:35:38] 2025-10-12 21:34:59,746 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:35:38] 2025-10-12 21:34:59,785 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:35:38] 2025-10-12 21:34:59,786 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:35:38] 2025-10-12 21:34:59,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:35:38] 2025-10-12 21:34:59,786 | INFO     | will abort loop
[2025-10-12 17:35:38] 2025-10-12 21:34:59,856 | INFO     | all payload control threads have been joined
[2025-10-12 17:35:38] 2025-10-12 21:34:59,893 | INFO     | all data control threads have been joined
[2025-10-12 17:35:38] 2025-10-12 21:35:00,710 | INFO     | all job control threads have been joined
[2025-10-12 17:35:38] 2025-10-12 21:35:00,751 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:00,791 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:00,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:35:38] 2025-10-12 21:35:00,866 | INFO     | [payload] control thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:00,899 | INFO     | [data] control thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:00,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:35:38] 2025-10-12 21:35:00,966 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:00,970 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:01,026 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:01,065 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:01,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:35:38] 2025-10-12 21:35:01,716 | INFO     | [job] control thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:01,843 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:01,996 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:02,018 | INFO     | [job] validate thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:02,046 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:02,484 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:02,861 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:04,946 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:35:38] 2025-10-12 21:35:28,657 | INFO     | PID=1547782 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:35:38] 2025-10-12 21:35:28,657 | INFO     | .. there are 45 such processes running
[2025-10-12 17:35:38] 2025-10-12 21:35:28,657 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:35:38] 2025-10-12 21:35:28,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:35:38] 2025-10-12 21:35:28,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:35:38] 2025-10-12 21:35:29,685 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:35:38] 2025-10-12 21:35:31,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558163867456)>', '<ExcThread(monitor, started 140557150050048)>']
[2025-10-12 17:35:38] 2025-10-12 21:35:31,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:35:38] 2025-10-12 21:35:31,675 | INFO     | [monitor] control thread has ended
[2025-10-12 17:35:38] 2025-10-12 21:35:36,491 | INFO     | all workflow threads have been joined
[2025-10-12 17:35:38] 2025-10-12 21:35:36,492 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:35:38] 2025-10-12 21:35:36,492 | INFO     | traces error code: 0
[2025-10-12 17:35:38] 2025-10-12 21:35:36,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:35:38] 2025-10-12 21:35:37,428 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:35:38] 2025-10-12 21:35:37,468 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:35:38] 2025-10-12 21:35:37,506 [wrapper] pilotpid: 1547782
[2025-10-12 17:35:38] 2025-10-12 21:35:37,551 [wrapper] Pilot exit status: 0
[2025-10-12 17:35:38] 2025-10-12 21:35:37,704 [wrapper] pandaids: 6840181313
[2025-10-12 17:35:38] 2025-10-12 21:35:38,135 [wrapper] cleanup supervisor_pilot 2614246 1547783
[2025-10-12 17:35:38] 2025-10-12 21:35:38,143 [wrapper] Test setup, not cleaning
[2025-10-12 17:35:38] 2025-10-12 21:35:38,146 [wrapper] apfmon messages muted
[2025-10-12 17:35:38] 2025-10-12 21:35:38,148 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:35:38] 2025-10-12 21:35:38,151 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:35:38]  *** Error codes and diagnostics ***
[2025-10-12 17:35:38]     "exeErrorCode": 0,
[2025-10-12 17:35:38]     "exeErrorDiag": "",
[2025-10-12 17:35:38]     "pilotErrorCode": 0,
[2025-10-12 17:35:38]     "pilotErrorDiag": "",
[2025-10-12 17:35:38]  *** Listing of results directory ***
[2025-10-12 17:35:38] total 411276
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:08 queuedata.json
[2025-10-12 17:35:38] -rwx------. 1 boincer umatlas     36292 Oct 12 10:09 runpilot2-wrapper.sh
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:35:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:01 run_atlas
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:01 job.xml
[2025-10-12 17:35:38] -rw-r--r--. 2 boincer umatlas 220302997 Oct 12 14:01 EVNT.46676267._004213.pool.root.1
[2025-10-12 17:35:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:01 start_atlas.sh
[2025-10-12 17:35:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:01 shared
[2025-10-12 17:35:38] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 14:01 input.tar.gz
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:01 boinc_lockfile
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:01 pandaJob.out
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas    975528 Oct 12 14:02 agis_schedconf.cvmfs.json
[2025-10-12 17:35:38] drwx------. 5 boincer umatlas      4096 Oct 12 14:02 pilot3
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas      6936 Oct 12 17:27 init_data.xml
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas 192966207 Oct 12 17:33 HITS.46676269._080272.pool.root.1
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas       530 Oct 12 17:33 boinc_task_state.xml
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas      1045 Oct 12 17:34 memory_monitor_summary.json
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas   1560580 Oct 12 17:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas    426836 Oct 12 17:34 log.46676269._080272.job.log.tgz.1
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas        95 Oct 12 17:34 pilot_heartbeat.json
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas      7795 Oct 12 17:34 heartbeat.json
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas        28 Oct 12 17:35 wrapper_checkpoint.txt
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:35 boinc_mmap_file
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas      5010 Oct 12 17:35 pilotlog.txt
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas   1557724 Oct 12 17:35 log.46676269._080272.job.log.1
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas       357 Oct 12 17:35 output.list
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:35 runtime_log
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas   2007040 Oct 12 17:35 result.tar.gz
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 17:35 runtime_log.err
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas       658 Oct 12 17:35 7jNODmYwBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmM3TMDmnzSRgm.diag
[2025-10-12 17:35:38] -rw-r--r--. 1 boincer umatlas     21198 Oct 12 17:35 stderr.txt
[2025-10-12 17:35:38] HITS file was successfully produced:
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas 192966207 Oct 12 17:33 shared/HITS.pool.root.1
[2025-10-12 17:35:38]  *** Contents of shared directory: ***
[2025-10-12 17:35:38] total 406128
[2025-10-12 17:35:38] -rw-r--r--. 2 boincer umatlas 220302997 Oct 12 14:01 ATLAS.root_0
[2025-10-12 17:35:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:01 start_atlas.sh
[2025-10-12 17:35:38] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 14:01 input.tar.gz
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas 192966207 Oct 12 17:33 HITS.pool.root.1
[2025-10-12 17:35:38] -rw-------. 1 boincer umatlas   2007040 Oct 12 17:35 result.tar.gz
17:35:40 (1543657): run_atlas exited; CPU time 36818.334001
17:35:40 (1543657): called boinc_finish(0)

</stderr_txt>
]]>

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