Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:47:03 (23151): wrapper (7.7.26015): starting
13:47:03 (23151): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:47:03] Arguments: --nthreads 8
[2025-10-12 13:47:03] Threads: 8
[2025-10-12 13:47:03] Checking for CVMFS
[2025-10-12 13:47:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:47:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:47:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:47:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:47:04] 2.11.2.0 27562 269586 270584 151629 2 188 18039338 18432001 2749 130560 7 628821169 99.266 1123235173 26113 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 13:47:04] CVMFS is ok
[2025-10-12 13:47:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:47:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:47:04] Further information can be found at the LHC@home message board.
[2025-10-12 13:47:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:47:04] Checking for apptainer binary...
[2025-10-12 13:47:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:47:04] Running /usr/bin/apptainer --version
[2025-10-12 13:47:04] apptainer version 1.3.2-1.el7
[2025-10-12 13:47:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:47:05] c-9-30.aglt2.org
[2025-10-12 13:47:05] apptainer works
[2025-10-12 13:47:05] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:47:05] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:47:05] Starting ATLAS job with PandaID=6826211716
[2025-10-12 13:47:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:21:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:21:44] 2025-10-12 21:20:57,296 | INFO     | sum of square deviations: 2871616632.5
[2025-10-12 17:21:44] 2025-10-12 21:20:57,297 | INFO     | sum of deviations: 48161890742.50001
[2025-10-12 17:21:44] 2025-10-12 21:20:57,297 | INFO     | mean x: 1760297636.5
[2025-10-12 17:21:44] 2025-10-12 21:20:57,298 | INFO     | mean y: 2457460.1
[2025-10-12 17:21:44] 2025-10-12 21:20:57,298 | INFO     | -- intersect: -29520725225.182766
[2025-10-12 17:21:44] 2025-10-12 21:20:57,298 | INFO     | intersect: -29520725225.182766
[2025-10-12 17:21:44] 2025-10-12 21:20:57,298 | INFO     | chi2: 1.459376078086404
[2025-10-12 17:21:44] 2025-10-12 21:20:57,298 | INFO     | sum of square deviations: 2671343110.0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,299 | INFO     | sum of deviations: 46776214772.99999
[2025-10-12 17:21:44] 2025-10-12 21:20:57,300 | INFO     | mean x: 1760297484.0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,300 | INFO     | mean y: 2456404.770731707
[2025-10-12 17:21:44] 2025-10-12 21:20:57,300 | INFO     | -- intersect: -30821009464.40978
[2025-10-12 17:21:44] 2025-10-12 21:20:57,300 | INFO     | intersect: -30821009464.40978
[2025-10-12 17:21:44] 2025-10-12 21:20:57,300 | INFO     | chi2: 1.4591731209149137
[2025-10-12 17:21:44] 2025-10-12 21:20:57,301 | INFO     | current chi2=1.4591731209149137 (change=0.013907119250334131 %)
[2025-10-12 17:21:44] 2025-10-12 21:20:57,301 | INFO     | right removable region: 204
[2025-10-12 17:21:44] 2025-10-12 21:20:57,301 | INFO     | sum of square deviations: 2671343110.0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,302 | INFO     | sum of deviations: 15036238432.000002
[2025-10-12 17:21:44] 2025-10-12 21:20:57,302 | INFO     | mean x: 1760297789.0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,302 | INFO     | mean y: 2482452.975609756
[2025-10-12 17:21:44] 2025-10-12 21:20:57,302 | INFO     | -- intersect: -9905738309.697752
[2025-10-12 17:21:44] 2025-10-12 21:20:57,302 | INFO     | intersect: -9905738309.697752
[2025-10-12 17:21:44] 2025-10-12 21:20:57,303 | INFO     | chi2: 0.06771457807980254
[2025-10-12 17:21:44] 2025-10-12 21:20:57,303 | INFO     | current chi2=0.06771457807980254 (change=95.36003233871061 %)
[2025-10-12 17:21:44] 2025-10-12 21:20:57,303 | INFO     | sum of square deviations: 2480604650.0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,304 | INFO     | sum of deviations: 5597254958.000001
[2025-10-12 17:21:44] 2025-10-12 21:20:57,304 | INFO     | mean x: 1760297941.5
[2025-10-12 17:21:44] 2025-10-12 21:20:57,304 | INFO     | mean y: 2490000.63
[2025-10-12 17:21:44] 2025-10-12 21:20:57,304 | INFO     | -- intersect: -3969459491.852839
[2025-10-12 17:21:44] 2025-10-12 21:20:57,305 | INFO     | intersect: -3969459491.852839
[2025-10-12 17:21:44] 2025-10-12 21:20:57,305 | INFO     | chi2: 0.0018516186159866213
[2025-10-12 17:21:44] 2025-10-12 21:20:57,305 | INFO     | current chi2=0.0018516186159866213 (change=97.26555393462769 %)
[2025-10-12 17:21:44] 2025-10-12 21:20:57,305 | INFO     | sum of square deviations: 2299168690.0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,306 | INFO     | sum of deviations: 5591026858.000001
[2025-10-12 17:21:44] 2025-10-12 21:20:57,306 | INFO     | mean x: 1760298094.0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,307 | INFO     | mean y: 2490001.6205128203
[2025-10-12 17:21:44] 2025-10-12 21:20:57,307 | INFO     | -- intersect: -4278132801.0674496
[2025-10-12 17:21:44] 2025-10-12 21:20:57,308 | INFO     | intersect: -4278132801.0674496
[2025-10-12 17:21:44] 2025-10-12 21:20:57,308 | INFO     | chi2: 0.001571734793432472
[2025-10-12 17:21:44] 2025-10-12 21:20:57,308 | INFO     | current chi2=0.001571734793432472 (change=15.115630191750649 %)
[2025-10-12 17:21:44] 2025-10-12 21:20:57,308 | INFO     | left removable region: 30
[2025-10-12 17:21:44] 2025-10-12 21:20:57,309 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 17:21:44] 2025-10-12 21:20:57,309 | INFO     | sum of deviations: 3629549531.999999
[2025-10-12 17:21:44] 2025-10-12 21:20:57,310 | INFO     | mean x: 1760298368.5
[2025-10-12 17:21:44] 2025-10-12 21:20:57,310 | INFO     | mean y: 2491274.643678161
[2025-10-12 17:21:44] 2025-10-12 21:20:57,310 | INFO     | -- intersect: -3908863320.2218423
[2025-10-12 17:21:44] 2025-10-12 21:20:57,310 | INFO     | intersect: -3908863320.2218423
[2025-10-12 17:21:44] 2025-10-12 21:20:57,310 | INFO     | chi2: 0.00015908737458556098
[2025-10-12 17:21:44] 2025-10-12 21:20:57,311 | INFO     | -- intersect: -3908863320.2218423
[2025-10-12 17:21:44] 2025-10-12 21:20:57,311 | INFO     | current memory leak: 2.22 B/s (using 174 data points, chi2=0.00)
[2025-10-12 17:21:44] 2025-10-12 21:20:57,311 | INFO     | could have reported an average CPU frequency of 2999 MHz (10 samples)
[2025-10-12 17:21:44] 2025-10-12 21:20:57,312 | INFO     | ..............................
[2025-10-12 17:21:44] 2025-10-12 21:20:57,312 | INFO     | . Timing measurements:
[2025-10-12 17:21:44] 2025-10-12 21:20:57,312 | INFO     | . get job = 0 s
[2025-10-12 17:21:44] 2025-10-12 21:20:57,312 | INFO     | . initial setup = 2 s
[2025-10-12 17:21:44] 2025-10-12 21:20:57,312 | INFO     | . payload setup = 4 s
[2025-10-12 17:21:44] 2025-10-12 21:20:57,312 | INFO     | . stage-in = 0 s
[2025-10-12 17:21:44] 2025-10-12 21:20:57,313 | INFO     | . payload execution = 12788 s
[2025-10-12 17:21:44] 2025-10-12 21:20:57,313 | INFO     | . stage-out = 2 s
[2025-10-12 17:21:44] 2025-10-12 21:20:57,313 | INFO     | . log creation = 0 s
[2025-10-12 17:21:44] 2025-10-12 21:20:57,313 | INFO     | ..............................
[2025-10-12 17:21:44] 2025-10-12 21:20:57,381 | INFO     | 
[2025-10-12 17:21:44] 2025-10-12 21:20:57,382 | INFO     | job summary report
[2025-10-12 17:21:44] 2025-10-12 21:20:57,382 | INFO     | --------------------------------------------------
[2025-10-12 17:21:44] 2025-10-12 21:20:57,382 | INFO     | PanDA job id: 6826211716
[2025-10-12 17:21:44] 2025-10-12 21:20:57,382 | INFO     | task id: 46373048
[2025-10-12 17:21:44] 2025-10-12 21:20:57,382 | INFO     | errors: (none)
[2025-10-12 17:21:44] 2025-10-12 21:20:57,382 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:21:44] 2025-10-12 21:20:57,383 | INFO     | pilot state: finished 
[2025-10-12 17:21:44] 2025-10-12 21:20:57,383 | INFO     | transexitcode: 0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,383 | INFO     | exeerrorcode: 0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,383 | INFO     | exeerrordiag: 
[2025-10-12 17:21:44] 2025-10-12 21:20:57,383 | INFO     | exitcode: 0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,384 | INFO     | exitmsg: OK
[2025-10-12 17:21:44] 2025-10-12 21:20:57,384 | INFO     | cpuconsumptiontime: 95381 s
[2025-10-12 17:21:44] 2025-10-12 21:20:57,384 | INFO     | nevents: 400
[2025-10-12 17:21:44] 2025-10-12 21:20:57,384 | INFO     | neventsw: 0
[2025-10-12 17:21:44] 2025-10-12 21:20:57,384 | INFO     | pid: 37126
[2025-10-12 17:21:44] 2025-10-12 21:20:57,384 | INFO     | pgrp: 37126
[2025-10-12 17:21:44] 2025-10-12 21:20:57,385 | INFO     | corecount: 8
[2025-10-12 17:21:44] 2025-10-12 21:20:57,385 | INFO     | event service: False
[2025-10-12 17:21:44] 2025-10-12 21:20:57,385 | INFO     | sizes: {0: 2348670, 1: 2348869, 4: 2349131, 12: 2349159, 12797: 2379308, 12799: 2388490, 12806: 2388656}
[2025-10-12 17:21:44] 2025-10-12 21:20:57,385 | INFO     | --------------------------------------------------
[2025-10-12 17:21:44] 2025-10-12 21:20:57,385 | INFO     | 
[2025-10-12 17:21:44] 2025-10-12 21:20:57,385 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 17:21:44] 2025-10-12 21:20:57,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,411 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,411 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,411 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,411 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:21:44] 2025-10-12 21:20:57,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,414 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:21:44] 2025-10-12 21:20:57,414 | INFO     | job 6826211716 has completed (purged errors)
[2025-10-12 17:21:44] 2025-10-12 21:20:57,415 | INFO     | overall cleanup function is called
[2025-10-12 17:21:44] 2025-10-12 21:20:57,609 | INFO     | number of running child processes to parent process 37126: 1
[2025-10-12 17:21:44] 2025-10-12 21:20:57,609 | INFO     | maximum number of monitored processes: 6
[2025-10-12 17:21:44] 2025-10-12 21:20:57,609 | INFO     | aborting job monitoring since job object (job id=6826211716) has expired
[2025-10-12 17:21:44] 2025-10-12 21:20:58,424 | INFO     | --- collectZombieJob: --- 10, [37126]
[2025-10-12 17:21:44] 2025-10-12 21:20:58,425 | INFO     | zombie collector waiting for pid 37126
[2025-10-12 17:21:44] 2025-10-12 21:20:58,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:21:44] 2025-10-12 21:20:58,425 | INFO     | collected zombie processes
[2025-10-12 17:21:44] 2025-10-12 21:20:58,425 | INFO     | will attempt to kill all subprocesses of pid=37126
[2025-10-12 17:21:44] 2025-10-12 21:20:58,726 | INFO     | process IDs to be killed: [37126] (in reverse order)
[2025-10-12 17:21:44] 2025-10-12 21:20:58,807 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:21:44] 2025-10-12 21:20:58,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:21:44] 2025-10-12 21:20:58,817 | INFO     | did not find any defunct processes belonging to 37126
[2025-10-12 17:21:44] 2025-10-12 21:20:58,826 | INFO     | did not find any defunct processes belonging to 37126
[2025-10-12 17:21:44] 2025-10-12 21:20:58,826 | INFO     | ready for new job
[2025-10-12 17:21:44] 2025-10-12 21:20:58,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:21:44] 2025-10-12 21:20:58,829 | INFO     | ***************************************
[2025-10-12 17:21:44] 2025-10-12 21:20:58,829 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 17:21:44] 2025-10-12 21:20:58,829 | INFO     | ***************************************
[2025-10-12 17:21:44] 2025-10-12 21:20:58,829 | INFO     | 
[2025-10-12 17:21:44] 2025-10-12 21:20:58,831 | INFO     | architecture information:
[2025-10-12 17:21:44] 2025-10-12 21:20:58,831 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:21:44] 2025-10-12 21:20:58,846 | INFO     | cat /etc/os-release:
[2025-10-12 17:21:44] NAME="CentOS Linux"
[2025-10-12 17:21:44] VERSION="7 (Core)"
[2025-10-12 17:21:44] ID="centos"
[2025-10-12 17:21:44] ID_LIKE="rhel fedora"
[2025-10-12 17:21:44] VERSION_ID="7"
[2025-10-12 17:21:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:21:44] ANSI_COLOR="0;31"
[2025-10-12 17:21:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:21:44] HOME_URL="https://www.centos.org/"
[2025-10-12 17:21:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:21:44] 
[2025-10-12 17:21:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:21:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:21:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:21:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:21:44] 
[2025-10-12 17:21:44] 2025-10-12 21:20:58,846 | INFO     | ***************************************
[2025-10-12 17:21:44] 2025-10-12 21:20:59,352 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 17:21:44] 2025-10-12 21:20:59,376 | INFO     | sufficient remaining disk space (104826142720 B)
[2025-10-12 17:21:44] 2025-10-12 21:20:59,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:21:44] 2025-10-12 21:20:59,377 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:21:44] 2025-10-12 21:20:59,377 | INFO     | update_server=False
[2025-10-12 17:21:44] 2025-10-12 21:20:59,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:21:44] 2025-10-12 21:20:59,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:21:44] 2025-10-12 21:20:59,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:21:44] 2025-10-12 21:20:59,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:21:44] 2025-10-12 21:20:59,379 | INFO     | aborting loop
[2025-10-12 17:21:44] 2025-10-12 21:21:00,219 | INFO     | all payload control threads have been joined
[2025-10-12 17:21:44] 2025-10-12 21:21:00,234 | INFO     | all data control threads have been joined
[2025-10-12 17:21:44] 2025-10-12 21:21:00,379 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:00,384 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:00,385 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:00,542 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:00,639 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:00,644 | INFO     | all job control threads have been joined
[2025-10-12 17:21:44] 2025-10-12 21:21:00,762 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:01,225 | INFO     | [payload] control thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:01,239 | INFO     | [data] control thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:01,270 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:01,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:21:44] 2025-10-12 21:21:01,383 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:01,491 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:01,608 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:01,650 | INFO     | [job] control thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:01,775 | INFO     | [job] validate thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:05,377 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:09,813 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:21:44] 2025-10-12 21:21:10,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:21:44] 2025-10-12 21:21:29,284 | INFO     | PID=27263 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 17:21:44] 2025-10-12 21:21:29,285 | INFO     | .. there are 4 such processes running
[2025-10-12 17:21:44] 2025-10-12 21:21:29,285 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:21:44] 2025-10-12 21:21:29,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:21:44] 2025-10-12 21:21:29,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:21:44] 2025-10-12 21:21:37,441 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:21:44] 2025-10-12 21:21:39,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139893255079744)>', '<ExcThread(monitor, started 139892805834496)>']
[2025-10-12 17:21:44] 2025-10-12 21:21:39,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:21:44] 2025-10-12 21:21:39,337 | INFO     | [monitor] control thread has ended
[2025-10-12 17:21:44] 2025-10-12 21:21:44,135 | INFO     | all workflow threads have been joined
[2025-10-12 17:21:44] 2025-10-12 21:21:44,135 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:21:44] 2025-10-12 21:21:44,136 | INFO     | traces error code: 0
[2025-10-12 17:21:44] 2025-10-12 21:21:44,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:21:44] 2025-10-12 21:21:44,287 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:21:44] 2025-10-12 21:21:44,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:21:44] 2025-10-12 21:21:44,296 [wrapper] pilotpid: 27263
[2025-10-12 17:21:44] 2025-10-12 21:21:44,300 [wrapper] Pilot exit status: 0
[2025-10-12 17:21:44] 2025-10-12 21:21:44,317 [wrapper] pandaids: 6826211716
[2025-10-12 17:21:44] 2025-10-12 21:21:44,383 [wrapper] cleanup supervisor_pilot 13152 27267
[2025-10-12 17:21:44] 2025-10-12 21:21:44,386 [wrapper] Test setup, not cleaning
[2025-10-12 17:21:44] 2025-10-12 21:21:44,388 [wrapper] apfmon messages muted
[2025-10-12 17:21:44] 2025-10-12 21:21:44,391 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:21:44] 2025-10-12 21:21:44,393 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:21:44]  *** Error codes and diagnostics ***
[2025-10-12 17:21:44]     "exeErrorCode": 0,
[2025-10-12 17:21:44]     "exeErrorDiag": "",
[2025-10-12 17:21:44]     "pilotErrorCode": 0,
[2025-10-12 17:21:44]     "pilotErrorDiag": "",
[2025-10-12 17:21:44]  *** Listing of results directory ***
[2025-10-12 17:21:44] total 422780
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas    552446 Sep 30 18:54 pilot3.tar.gz
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas      5112 Sep 30 19:19 queuedata.json
[2025-10-12 17:21:44] -rwx------ 1 boincer umatlas     36292 Sep 30 19:20 runpilot2-wrapper.sh
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:21:44] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:47 run_atlas
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:47 job.xml
[2025-10-12 17:21:44] -rw-r--r-- 2 boincer umatlas 220108346 Oct 12 13:47 EVNT.46373045._002405.pool.root.1
[2025-10-12 17:21:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:47 start_atlas.sh
[2025-10-12 17:21:44] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:47 shared
[2025-10-12 17:21:44] -rw-r--r-- 2 boincer umatlas    565604 Oct 12 13:47 input.tar.gz
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:47 boinc_lockfile
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas      2538 Oct 12 13:47 pandaJob.out
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas    975528 Oct 12 13:47 agis_schedconf.cvmfs.json
[2025-10-12 17:21:44] drwx------ 4 boincer umatlas      4096 Oct 12 13:47 pilot3
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas      6035 Oct 12 17:19 init_data.xml
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas 204483185 Oct 12 17:20 HITS.46373048._072868.pool.root.1
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas       530 Oct 12 17:20 boinc_task_state.xml
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas      1048 Oct 12 17:20 memory_monitor_summary.json
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas   1560580 Oct 12 17:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas    455520 Oct 12 17:20 log.46373048._072868.job.log.tgz.1
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas        95 Oct 12 17:20 pilot_heartbeat.json
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas      7848 Oct 12 17:20 heartbeat.json
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 17:21 boinc_mmap_file
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas        28 Oct 12 17:21 wrapper_checkpoint.txt
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas      4894 Oct 12 17:21 pilotlog.txt
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas   1764875 Oct 12 17:21 log.46373048._072868.job.log.1
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas       357 Oct 12 17:21 output.list
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas       620 Oct 12 17:21 runtime_log
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas   2242560 Oct 12 17:21 result.tar.gz
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas      8694 Oct 12 17:21 runtime_log.err
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas       659 Oct 12 17:21 Gb2KDmvoyN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmJANDmLTTxOm.diag
[2025-10-12 17:21:44] -rw-r--r-- 1 boincer umatlas     20939 Oct 12 17:21 stderr.txt
[2025-10-12 17:21:44] HITS file was successfully produced:
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas 204483185 Oct 12 17:20 shared/HITS.pool.root.1
[2025-10-12 17:21:44]  *** Contents of shared directory: ***
[2025-10-12 17:21:44] total 417412
[2025-10-12 17:21:44] -rw-r--r-- 2 boincer umatlas 220108346 Oct 12 13:47 ATLAS.root_0
[2025-10-12 17:21:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:47 start_atlas.sh
[2025-10-12 17:21:44] -rw-r--r-- 2 boincer umatlas    565604 Oct 12 13:47 input.tar.gz
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas 204483185 Oct 12 17:20 HITS.pool.root.1
[2025-10-12 17:21:44] -rw------- 1 boincer umatlas   2242560 Oct 12 17:21 result.tar.gz
17:21:46 (23151): run_atlas exited; CPU time 95781.433647
17:21:46 (23151): called boinc_finish(0)

</stderr_txt>
]]>

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