Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:43:34 (6838): wrapper (7.7.26015): starting
13:43:34 (6838): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:43:34] Arguments: --nthreads 8
[2025-10-12 13:43:34] Threads: 8
[2025-10-12 13:43:34] Checking for CVMFS
[2025-10-12 13:43:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:43:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:43:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:43:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:43:35] 2.11.2.0 2932 201723 119220 151629 3 57 13452621 20275200 1 130560 1 72953605 99.973 10266183 13760 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:43:35] CVMFS is ok
[2025-10-12 13:43:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:43:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:43:35] Further information can be found at the LHC@home message board.
[2025-10-12 13:43:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:43:35] Checking for apptainer binary...
[2025-10-12 13:43:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:43:35] Running /usr/bin/apptainer --version
[2025-10-12 13:43:35] apptainer version 1.3.2-1.el7
[2025-10-12 13:43:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:43:37] c-204-17.aglt2.org
[2025-10-12 13:43:37] apptainer works
[2025-10-12 13:43:37] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:43:37] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:43:37] Starting ATLAS job with PandaID=6840181723
[2025-10-12 13:43:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:52:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:52:28] 2025-10-12 19:51:56,823 | INFO     | -- intersect: -30040588232.637993
[2025-10-12 15:52:28] 2025-10-12 19:51:56,824 | INFO     | intersect: -30040588232.637993
[2025-10-12 15:52:28] 2025-10-12 19:51:56,824 | INFO     | chi2: 2.1364010420758235
[2025-10-12 15:52:28] 2025-10-12 19:51:56,824 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,825 | INFO     | sum of deviations: 18211538166.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,825 | INFO     | mean x: 1760294726.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,825 | INFO     | mean y: 2467821.1487603304
[2025-10-12 15:52:28] 2025-10-12 19:51:56,825 | INFO     | -- intersect: -58359126186.2965
[2025-10-12 15:52:28] 2025-10-12 19:51:56,826 | INFO     | intersect: -58359126186.2965
[2025-10-12 15:52:28] 2025-10-12 19:51:56,826 | INFO     | chi2: 1.365598030594807
[2025-10-12 15:52:28] 2025-10-12 19:51:56,826 | INFO     | current chi2=1.365598030594807 (change=36.07950924476565 %)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,826 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,827 | INFO     | sum of deviations: 17370876182.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,827 | INFO     | mean x: 1760294573.5
[2025-10-12 15:52:28] 2025-10-12 19:51:56,827 | INFO     | mean y: 2465857.4827586208
[2025-10-12 15:52:28] 2025-10-12 19:51:56,827 | INFO     | -- intersect: -63178601662.04133
[2025-10-12 15:52:28] 2025-10-12 19:51:56,827 | INFO     | intersect: -63178601662.04133
[2025-10-12 15:52:28] 2025-10-12 19:51:56,828 | INFO     | chi2: 1.3672231001828794
[2025-10-12 15:52:28] 2025-10-12 19:51:56,828 | INFO     | current chi2=1.3672231001828794 (change=-0.11900058081986097 %)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,828 | INFO     | right removable region: 115
[2025-10-12 15:52:28] 2025-10-12 19:51:56,829 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,829 | INFO     | sum of deviations: -6699496531.999999
[2025-10-12 15:52:28] 2025-10-12 19:51:56,829 | INFO     | mean x: 1760295031.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,829 | INFO     | mean y: 2488416.752066116
[2025-10-12 15:52:28] 2025-10-12 19:51:56,830 | INFO     | -- intersect: 21472029365.844013
[2025-10-12 15:52:28] 2025-10-12 19:51:56,830 | INFO     | intersect: 21472029365.844013
[2025-10-12 15:52:28] 2025-10-12 19:51:56,830 | INFO     | chi2: 0.8159785756195976
[2025-10-12 15:52:28] 2025-10-12 19:51:56,830 | INFO     | current chi2=0.8159785756195976 (change=61.805926904680966 %)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,831 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,831 | INFO     | sum of deviations: -5451604892.000001
[2025-10-12 15:52:28] 2025-10-12 19:51:56,831 | INFO     | mean x: 1760295183.5
[2025-10-12 15:52:28] 2025-10-12 19:51:56,832 | INFO     | sufficient remaining disk space (18541969408 B)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,832 | INFO     | mean y: 2485602.793103448
[2025-10-12 15:52:28] 2025-10-12 19:51:56,833 | INFO     | -- intersect: 19830980868.179325
[2025-10-12 15:52:28] 2025-10-12 19:51:56,833 | INFO     | intersect: 19830980868.179325
[2025-10-12 15:52:28] 2025-10-12 19:51:56,833 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,833 | INFO     | chi2: 0.8024538682709801
[2025-10-12 15:52:28] 2025-10-12 19:51:56,834 | INFO     | current chi2=0.8024538682709801 (change=1.657483143886201 %)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,834 | INFO     | left removable region: 20
[2025-10-12 15:52:28] 2025-10-12 19:51:56,835 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,835 | INFO     | sum of deviations: 1278856216.0000002
[2025-10-12 15:52:28] 2025-10-12 19:51:56,835 | INFO     | mean x: 1760295153.0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,836 | INFO     | mean y: 2506192.8736842107
[2025-10-12 15:52:28] 2025-10-12 19:51:56,836 | INFO     | -- intersect: -8465986087.738495
[2025-10-12 15:52:28] 2025-10-12 19:51:56,836 | INFO     | intersect: -8465986087.738495
[2025-10-12 15:52:28] 2025-10-12 19:51:56,836 | INFO     | chi2: 0.00019778310079906965
[2025-10-12 15:52:28] 2025-10-12 19:51:56,836 | INFO     | -- intersect: -8465986087.738495
[2025-10-12 15:52:28] 2025-10-12 19:51:56,837 | INFO     | current memory leak: 4.81 B/s (using 95 data points, chi2=0.00)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,837 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,837 | INFO     | ..............................
[2025-10-12 15:52:28] 2025-10-12 19:51:56,838 | INFO     | . Timing measurements:
[2025-10-12 15:52:28] 2025-10-12 19:51:56,838 | INFO     | . get job = 0 s
[2025-10-12 15:52:28] 2025-10-12 19:51:56,838 | INFO     | . initial setup = 2 s
[2025-10-12 15:52:28] 2025-10-12 19:51:56,838 | INFO     | . payload setup = 8 s
[2025-10-12 15:52:28] 2025-10-12 19:51:56,839 | INFO     | . stage-in = 0 s
[2025-10-12 15:52:28] 2025-10-12 19:51:56,839 | INFO     | . payload execution = 7642 s
[2025-10-12 15:52:28] 2025-10-12 19:51:56,839 | INFO     | . stage-out = 0 s
[2025-10-12 15:52:28] 2025-10-12 19:51:56,839 | INFO     | . log creation = 0 s
[2025-10-12 15:52:28] 2025-10-12 19:51:56,839 | INFO     | ..............................
[2025-10-12 15:52:28] 2025-10-12 19:51:56,932 | INFO     | 
[2025-10-12 15:52:28] 2025-10-12 19:51:56,933 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6840181723: 3616915 B (within 2537553920 B limit)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,933 | INFO     | job summary report
[2025-10-12 15:52:28] 2025-10-12 19:51:56,933 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6840181723/HITS.46676269._080598.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,934 | INFO     | --------------------------------------------------
[2025-10-12 15:52:28] 2025-10-12 19:51:56,934 | INFO     | total size of present files: 0 B (workdir size: 3616915 B)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,934 | INFO     | PanDA job id: 6840181723
[2025-10-12 15:52:28] 2025-10-12 19:51:56,935 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6840181723/HITS.46676269._080598.pool.root.1 since it does not exist
[2025-10-12 15:52:28] 2025-10-12 19:51:56,935 | INFO     | task id: 46676269
[2025-10-12 15:52:28] 2025-10-12 19:51:56,936 | INFO     | errors: (none)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,936 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:52:28] 2025-10-12 19:51:56,936 | INFO     | pilot state: finished 
[2025-10-12 15:52:28] 2025-10-12 19:51:56,936 | INFO     | transexitcode: 0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,936 | INFO     | exeerrorcode: 0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,937 | INFO     | exeerrordiag: 
[2025-10-12 15:52:28] 2025-10-12 19:51:56,937 | INFO     | exitcode: 0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,937 | INFO     | exitmsg: OK
[2025-10-12 15:52:28] 2025-10-12 19:51:56,937 | INFO     | cpuconsumptiontime: 57991 s
[2025-10-12 15:52:28] 2025-10-12 19:51:56,937 | INFO     | nevents: 400
[2025-10-12 15:52:28] 2025-10-12 19:51:56,937 | INFO     | neventsw: 0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,938 | INFO     | pid: 18016
[2025-10-12 15:52:28] 2025-10-12 19:51:56,938 | INFO     | pgrp: 18016
[2025-10-12 15:52:28] 2025-10-12 19:51:56,938 | INFO     | corecount: 8
[2025-10-12 15:52:28] 2025-10-12 19:51:56,938 | INFO     | event service: False
[2025-10-12 15:52:28] 2025-10-12 19:51:56,938 | INFO     | sizes: {0: 2348857, 1: 2348857, 6: 2349147, 11: 2349175, 7654: 2376749, 7656: 2385747, 7658: 2385931, 7665: 2386125}
[2025-10-12 15:52:28] 2025-10-12 19:51:56,938 | INFO     | --------------------------------------------------
[2025-10-12 15:52:28] 2025-10-12 19:51:56,938 | INFO     | 
[2025-10-12 15:52:28] 2025-10-12 19:51:56,939 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:52:28] 2025-10-12 19:51:56,965 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,966 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,966 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,966 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:52:28] 2025-10-12 19:51:56,970 | INFO     | job 6840181723 has completed (purged errors)
[2025-10-12 15:52:28] 2025-10-12 19:51:56,970 | INFO     | overall cleanup function is called
[2025-10-12 15:52:28] 2025-10-12 19:51:57,044 | INFO     | number of running child processes to parent process 18016: 1
[2025-10-12 15:52:28] 2025-10-12 19:51:57,045 | INFO     | maximum number of monitored processes: 6
[2025-10-12 15:52:28] 2025-10-12 19:51:57,045 | INFO     | aborting job monitoring since job object (job id=6840181723) has expired
[2025-10-12 15:52:28] 2025-10-12 19:51:57,980 | INFO     | --- collectZombieJob: --- 10, [18016]
[2025-10-12 15:52:28] 2025-10-12 19:51:57,980 | INFO     | zombie collector waiting for pid 18016
[2025-10-12 15:52:28] 2025-10-12 19:51:57,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:52:28] 2025-10-12 19:51:57,980 | INFO     | collected zombie processes
[2025-10-12 15:52:28] 2025-10-12 19:51:57,981 | INFO     | will attempt to kill all subprocesses of pid=18016
[2025-10-12 15:52:28] 2025-10-12 19:51:58,070 | INFO     | process IDs to be killed: [18016] (in reverse order)
[2025-10-12 15:52:28] 2025-10-12 19:51:58,131 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:52:28] 2025-10-12 19:51:58,132 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:52:28] 2025-10-12 19:51:58,137 | INFO     | did not find any defunct processes belonging to 18016
[2025-10-12 15:52:28] 2025-10-12 19:51:58,140 | INFO     | did not find any defunct processes belonging to 18016
[2025-10-12 15:52:28] 2025-10-12 19:51:58,140 | INFO     | ready for new job
[2025-10-12 15:52:28] 2025-10-12 19:51:58,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:52:28] 2025-10-12 19:51:58,142 | INFO     | ***************************************
[2025-10-12 15:52:28] 2025-10-12 19:51:58,143 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:52:28] 2025-10-12 19:51:58,143 | INFO     | ***************************************
[2025-10-12 15:52:28] 2025-10-12 19:51:58,143 | INFO     | 
[2025-10-12 15:52:28] 2025-10-12 19:51:58,143 | INFO     | architecture information:
[2025-10-12 15:52:28] 2025-10-12 19:51:58,144 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:52:28] 2025-10-12 19:51:58,163 | INFO     | cat /etc/os-release:
[2025-10-12 15:52:28] NAME="CentOS Linux"
[2025-10-12 15:52:28] VERSION="7 (Core)"
[2025-10-12 15:52:28] ID="centos"
[2025-10-12 15:52:28] ID_LIKE="rhel fedora"
[2025-10-12 15:52:28] VERSION_ID="7"
[2025-10-12 15:52:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:52:28] ANSI_COLOR="0;31"
[2025-10-12 15:52:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:52:28] HOME_URL="https://www.centos.org/"
[2025-10-12 15:52:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:52:28] 
[2025-10-12 15:52:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:52:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:52:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:52:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:52:28] 
[2025-10-12 15:52:28] 2025-10-12 19:51:58,163 | INFO     | ***************************************
[2025-10-12 15:52:28] 2025-10-12 19:51:58,666 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:52:28] 2025-10-12 19:51:58,686 | INFO     | sufficient remaining disk space (18547212288 B)
[2025-10-12 15:52:28] 2025-10-12 19:51:58,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:52:28] 2025-10-12 19:51:58,687 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:52:28] 2025-10-12 19:51:58,687 | INFO     | update_server=False
[2025-10-12 15:52:28] 2025-10-12 19:51:58,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:52:28] 2025-10-12 19:51:58,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:52:28] 2025-10-12 19:51:58,688 | INFO     | aborting loop
[2025-10-12 15:52:28] 2025-10-12 19:51:58,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:52:28] 2025-10-12 19:51:58,735 | INFO     | all job control threads have been joined
[2025-10-12 15:52:28] 2025-10-12 19:51:58,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:52:28] 2025-10-12 19:51:59,533 | INFO     | all data control threads have been joined
[2025-10-12 15:52:28] 2025-10-12 19:51:59,693 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:51:59,694 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:51:59,694 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:51:59,741 | INFO     | [job] control thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:51:59,945 | INFO     | all payload control threads have been joined
[2025-10-12 15:52:28] 2025-10-12 19:52:00,196 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:00,260 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:00,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:52:28] 2025-10-12 19:52:00,539 | INFO     | [data] control thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:00,785 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:00,807 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:00,808 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:00,830 | INFO     | [job] validate thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:00,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:00,929 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:00,951 | INFO     | [payload] control thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:01,098 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:04,405 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:52:28] 2025-10-12 19:52:06,406 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:52:28] 2025-10-12 19:52:07,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620180563776)>', '<ExcThread(monitor, started 140619208963840)>']
[2025-10-12 15:52:28] 2025-10-12 19:52:12,254 | INFO     | all workflow threads have been joined
[2025-10-12 15:52:28] 2025-10-12 19:52:12,254 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:52:28] 2025-10-12 19:52:12,254 | INFO     | traces error code: 0
[2025-10-12 15:52:28] 2025-10-12 19:52:12,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:52:28] 2025-10-12 19:52:28,421 | INFO     | PID=11601 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:52:28] 2025-10-12 19:52:28,421 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:52:28] 2025-10-12 19:52:28,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:52:28] 2025-10-12 19:52:28,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:52:28] 2025-10-12 19:52:28,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:52:28] 2025-10-12 19:52:28,422 | INFO     | [monitor] control thread has ended
[2025-10-12 15:52:28] 2025-10-12 19:52:28,528 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:52:28] 2025-10-12 19:52:28,532 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:52:28] 2025-10-12 19:52:28,537 [wrapper] pilotpid: 11601
[2025-10-12 15:52:28] 2025-10-12 19:52:28,542 [wrapper] Pilot exit status: 0
[2025-10-12 15:52:28] 2025-10-12 19:52:28,562 [wrapper] pandaids: 6840181723
[2025-10-12 15:52:28] 2025-10-12 19:52:28,609 [wrapper] cleanup supervisor_pilot 29599 11602
[2025-10-12 15:52:28] 2025-10-12 19:52:28,614 [wrapper] Test setup, not cleaning
[2025-10-12 15:52:28] 2025-10-12 19:52:28,619 [wrapper] apfmon messages muted
[2025-10-12 15:52:28] 2025-10-12 19:52:28,624 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:52:28] 2025-10-12 19:52:28,629 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:52:28]  *** Error codes and diagnostics ***
[2025-10-12 15:52:28]     "exeErrorCode": 0,
[2025-10-12 15:52:28]     "exeErrorDiag": "",
[2025-10-12 15:52:28]     "pilotErrorCode": 0,
[2025-10-12 15:52:28]     "pilotErrorDiag": "",
[2025-10-12 15:52:28]  *** Listing of results directory ***
[2025-10-12 15:52:28] total 413920
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 15:52:28] -rwx------ 1 boincer umatlas     36292 Oct 12 10:22 runpilot2-wrapper.sh
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 10:23 queuedata.json
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:52:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:43 run_atlas
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:43 job.xml
[2025-10-12 15:52:28] -rw-r--r-- 2 boincer umatlas 220437601 Oct 12 13:43 EVNT.46676267._004229.pool.root.1
[2025-10-12 15:52:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:43 start_atlas.sh
[2025-10-12 15:52:28] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:43 shared
[2025-10-12 15:52:28] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 13:43 input.tar.gz
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:43 boinc_lockfile
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:43 pandaJob.out
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas    975528 Oct 12 13:43 agis_schedconf.cvmfs.json
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas   1560580 Oct 12 13:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:52:28] drwx------ 5 boincer umatlas      4096 Oct 12 13:43 pilot3
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 15:47 init_data.xml
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas 196619752 Oct 12 15:51 HITS.46676269._080598.pool.root.1
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas       529 Oct 12 15:51 boinc_task_state.xml
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas      1051 Oct 12 15:51 memory_monitor_summary.json
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas        95 Oct 12 15:51 pilot_heartbeat.json
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas    368708 Oct 12 15:51 log.46676269._080598.job.log.tgz.1
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas      7847 Oct 12 15:51 heartbeat.json
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas       745 Oct 12 15:52 pilotlog.txt
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas   1080498 Oct 12 15:52 log.46676269._080598.job.log.1
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:52 boinc_mmap_file
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas        27 Oct 12 15:52 wrapper_checkpoint.txt
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas       357 Oct 12 15:52 output.list
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:52 runtime_log
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas   1464320 Oct 12 15:52 result.tar.gz
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 15:52 runtime_log.err
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas       660 Oct 12 15:52 KGcMDmZ9BS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmR5TMDmwjf2dn.diag
[2025-10-12 15:52:28] -rw-r--r-- 1 boincer umatlas     21321 Oct 12 15:52 stderr.txt
[2025-10-12 15:52:28] HITS file was successfully produced:
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas 196619752 Oct 12 15:51 shared/HITS.pool.root.1
[2025-10-12 15:52:28]  *** Contents of shared directory: ***
[2025-10-12 15:52:28] total 409300
[2025-10-12 15:52:28] -rw-r--r-- 2 boincer umatlas 220437601 Oct 12 13:43 ATLAS.root_0
[2025-10-12 15:52:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:43 start_atlas.sh
[2025-10-12 15:52:28] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 13:43 input.tar.gz
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas 196619752 Oct 12 15:51 HITS.pool.root.1
[2025-10-12 15:52:28] -rw------- 1 boincer umatlas   1464320 Oct 12 15:52 result.tar.gz
15:52:30 (6838): run_atlas exited; CPU time 57932.294001
15:52:30 (6838): called boinc_finish(0)

</stderr_txt>
]]>

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