Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:58 (2044460): wrapper (7.7.26015): starting
23:27:58 (2044460): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 23:27:58] Arguments: --nthreads 12
[2025-10-12 23:27:58] Threads: 12
[2025-10-12 23:27:58] Checking for CVMFS
[2025-10-12 23:27:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:27:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:27:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:27:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:27:59] 2.13.2.0 8715 29587 235220 151638 2 188 40390700 46080001 6410 130560 0 200354960 99.890 56053853 21598 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-12 23:27:59] CVMFS is ok
[2025-10-12 23:27:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:27:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:27:59] Further information can be found at the LHC@home message board.
[2025-10-12 23:27:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:27:59] Checking for apptainer binary...
[2025-10-12 23:27:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:27:59] Running /usr/bin/apptainer --version
[2025-10-12 23:27:59] apptainer version 1.4.2-1.el9
[2025-10-12 23:27:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:27:59] mff2104.farm.particle.cz
[2025-10-12 23:27:59] apptainer works
[2025-10-12 23:27:59] Set ATHENA_PROC_NUMBER=12
[2025-10-12 23:27:59] Set ATHENA_CORE_NUMBER=12
[2025-10-12 23:27:59] Starting ATLAS job with PandaID=6840182021
[2025-10-12 23:27:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:22:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:22:43]  status_code=0
[2025-10-13 00:22:43]  storage_token=
[2025-10-13 00:22:43]  surl=/scratch/.boinc/slots/7/PanDA_Pilot-6840182021/log.46676269._080881.job.log.tgz.1
[2025-10-13 00:22:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/1e/log.46676269._080881.job.log.tgz.1
[2025-10-13 00:22:43]  workdir=None
[2025-10-13 00:22:43] ]
[2025-10-13 00:22:43] 2025-10-12 22:22:04,308 | INFO     | transferring file log.46676269._080881.job.log.tgz.1 from /scratch/.boinc/slots/7/PanDA_Pilot-6840182021/log.46676269._080881.job.log.tgz.1 to /scratch/.boinc/slot
[2025-10-13 00:22:43] 2025-10-12 22:22:04,309 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/7/PanDA_Pilot-6840182021/log.46676269._080881.job.log.tgz.1 /scratch/.boinc/slots/7/log.46676269._080881.j
[2025-10-13 00:22:43] 2025-10-12 22:22:04,334 | INFO     | adding to output.list: log.46676269._080881.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/1e/log.46676269._080881.job.log.tg
[2025-10-13 00:22:43] 2025-10-12 22:22:04,335 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:22:43] 2025-10-12 22:22:04,335 | INFO     | summary of transferred files:
[2025-10-13 00:22:43] 2025-10-12 22:22:04,335 | INFO     |  -- lfn=log.46676269._080881.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:22:43] 2025-10-12 22:22:04,335 | INFO     | stage-out finished correctly
[2025-10-13 00:22:43] 2025-10-12 22:22:04,419 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:22:43] 2025-10-12 22:22:04,515 | INFO     | job 6840182021 has state=finished
[2025-10-13 00:22:43] 2025-10-12 22:22:04,515 | INFO     | preparing for final server update for job 6840182021 in state='finished'
[2025-10-13 00:22:43] 2025-10-12 22:22:05,101 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 00:22:43] 2025-10-12 22:22:05,101 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:22:43] 2025-10-12 22:22:05,101 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:22:43] 2025-10-12 22:22:05,102 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:22:43] 2025-10-12 22:22:05,102 | INFO     | job 6840182021 has finished - writing final server update
[2025-10-13 00:22:43] 2025-10-12 22:22:05,102 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:22:43] 2025-10-12 22:22:05,103 | INFO     | executing command: lscpu
[2025-10-13 00:22:43] 2025-10-12 22:22:05,182 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:22:43] 2025-10-12 22:22:05,199 | INFO     | time since job start (3234s) is within the limit (172800.0s)
[2025-10-13 00:22:43] 2025-10-12 22:22:05,420 | INFO     | monitor loop #238: job 0:6840182021 is in state 'finished'
[2025-10-13 00:22:43] 2025-10-12 22:22:05,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:22:43] 2025-10-12 22:22:06,607 | INFO     | PID=2048537 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 00:22:43] 2025-10-12 22:22:06,607 | INFO     | .. there are 8 such processes running
[2025-10-13 00:22:43] 2025-10-12 22:22:07,608 | INFO     | time since job start (3236s) is within the limit (172800.0s)
[2025-10-13 00:22:43] 2025-10-12 22:22:07,924 | INFO     | monitor loop #239: job 0:6840182021 is in state 'finished'
[2025-10-13 00:22:43] 2025-10-12 22:22:07,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:22:43] 2025-10-12 22:22:09,614 | INFO     | time since job start (3238s) is within the limit (172800.0s)
[2025-10-13 00:22:43] 2025-10-12 22:22:10,241 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:22:43] 2025-10-12 22:22:10,256 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2727.9801041666656
[2025-10-13 00:22:43] 2025-10-12 22:22:10,274 | INFO     | using path: /scratch/.boinc/slots/7/PanDA_Pilot-6840182021/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:22:43] 2025-10-12 22:22:10,275 | INFO     | extracted standard info from prmon json
[2025-10-13 00:22:43] 2025-10-12 22:22:10,275 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:22:43] 2025-10-12 22:22:10,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:22:43] 2025-10-12 22:22:10,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:22:43] 2025-10-12 22:22:10,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:22:43] 2025-10-12 22:22:10,277 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:22:43] 2025-10-12 22:22:10,277 | INFO     | sum of square deviations: 30168007.5
[2025-10-13 00:22:43] 2025-10-12 22:22:10,278 | INFO     | sum of deviations: -892968782.5000001
[2025-10-13 00:22:43] 2025-10-12 22:22:10,278 | INFO     | mean x: 1760306198.5
[2025-10-13 00:22:43] 2025-10-12 22:22:10,278 | INFO     | mean y: 2727834.5434782607
[2025-10-13 00:22:43] 2025-10-12 22:22:10,279 | INFO     | -- intersect: 52107543934.9024
[2025-10-13 00:22:43] 2025-10-12 22:22:10,279 | INFO     | intersect: 52107543934.9024
[2025-10-13 00:22:43] 2025-10-12 22:22:10,279 | INFO     | chi2: 0.003422349068258296
[2025-10-13 00:22:43] 2025-10-12 22:22:10,279 | INFO     | -- intersect: 52107543934.9024
[2025-10-13 00:22:43] 2025-10-12 22:22:10,279 | INFO     | current memory leak: -29.60 B/s (using 46 data points, chi2=0.00)
[2025-10-13 00:22:43] 2025-10-12 22:22:10,279 | INFO     | could have reported an average CPU frequency of 2751 MHz (5 samples)
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | ..............................
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | . Timing measurements:
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | . get job = 0 s
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | . initial setup = 1 s
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | . payload setup = 7 s
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | . stage-in = 0 s
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | . payload execution = 3204 s
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | . stage-out = 0 s
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | . log creation = 0 s
[2025-10-13 00:22:43] 2025-10-12 22:22:10,280 | INFO     | ..............................
[2025-10-13 00:22:43] 2025-10-12 22:22:10,446 | INFO     | 
[2025-10-13 00:22:43] 2025-10-12 22:22:10,446 | INFO     | job summary report
[2025-10-13 00:22:43] 2025-10-12 22:22:10,446 | INFO     | --------------------------------------------------
[2025-10-13 00:22:43] 2025-10-12 22:22:10,446 | INFO     | PanDA job id: 6840182021
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | task id: 46676269
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | errors: (none)
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | pilot state: finished 
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | transexitcode: 0
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | exeerrorcode: 0
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | exeerrordiag: 
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | exitcode: 0
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | exitmsg: OK
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | cpuconsumptiontime: 34176 s
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | nevents: 400
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | neventsw: 0
[2025-10-13 00:22:43] 2025-10-12 22:22:10,447 | INFO     | pid: 2055597
[2025-10-13 00:22:43] 2025-10-12 22:22:10,448 | INFO     | pgrp: 2055597
[2025-10-13 00:22:43] 2025-10-12 22:22:10,448 | INFO     | corecount: 12
[2025-10-13 00:22:43] 2025-10-12 22:22:10,448 | INFO     | event service: False
[2025-10-13 00:22:43] 2025-10-12 22:22:10,448 | INFO     | sizes: {0: 2348858, 6: 2349120, 11: 2349148, 3215: 2374681, 3216: 2383737, 3222: 2383907}
[2025-10-13 00:22:43] 2025-10-12 22:22:10,448 | INFO     | --------------------------------------------------
[2025-10-13 00:22:43] 2025-10-12 22:22:10,448 | INFO     | 
[2025-10-13 00:22:43] 2025-10-12 22:22:10,448 | INFO     | executing command: ls -lF /scratch/.boinc/slots/7
[2025-10-13 00:22:43] 2025-10-12 22:22:10,532 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | job 6840182021 has completed (purged errors)
[2025-10-13 00:22:43] 2025-10-12 22:22:10,534 | INFO     | overall cleanup function is called
[2025-10-13 00:22:43] 2025-10-12 22:22:11,544 | INFO     | --- collectZombieJob: --- 10, [2055597]
[2025-10-13 00:22:43] 2025-10-12 22:22:11,545 | INFO     | zombie collector waiting for pid 2055597
[2025-10-13 00:22:43] 2025-10-12 22:22:11,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:22:43] 2025-10-12 22:22:11,545 | INFO     | collected zombie processes
[2025-10-13 00:22:43] 2025-10-12 22:22:11,545 | INFO     | will attempt to kill all subprocesses of pid=2055597
[2025-10-13 00:22:43] 2025-10-12 22:22:11,885 | INFO     | process IDs to be killed: [2055597] (in reverse order)
[2025-10-13 00:22:43] 2025-10-12 22:22:12,002 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:22:43] 2025-10-12 22:22:12,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:22:43] 2025-10-12 22:22:12,015 | INFO     | did not find any defunct processes belonging to 2055597
[2025-10-13 00:22:43] 2025-10-12 22:22:12,025 | INFO     | did not find any defunct processes belonging to 2055597
[2025-10-13 00:22:43] 2025-10-12 22:22:12,026 | INFO     | ready for new job
[2025-10-13 00:22:43] 2025-10-12 22:22:12,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:22:43] 2025-10-12 22:22:12,028 | INFO     | ***************************************
[2025-10-13 00:22:43] 2025-10-12 22:22:12,028 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:22:43] 2025-10-12 22:22:12,028 | INFO     | ***************************************
[2025-10-13 00:22:43] 2025-10-12 22:22:12,028 | INFO     | 
[2025-10-13 00:22:43] 2025-10-12 22:22:12,034 | INFO     | architecture information:
[2025-10-13 00:22:43] 2025-10-12 22:22:12,035 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:22:43] 2025-10-12 22:22:12,057 | INFO     | cat /etc/os-release:
[2025-10-13 00:22:43] NAME="CentOS Linux"
[2025-10-13 00:22:43] VERSION="7 (Core)"
[2025-10-13 00:22:43] ID="centos"
[2025-10-13 00:22:43] ID_LIKE="rhel fedora"
[2025-10-13 00:22:43] VERSION_ID="7"
[2025-10-13 00:22:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:22:43] ANSI_COLOR="0;31"
[2025-10-13 00:22:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:22:43] HOME_URL="https://www.centos.org/"
[2025-10-13 00:22:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:22:43] 
[2025-10-13 00:22:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:22:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:22:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:22:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:22:43] 
[2025-10-13 00:22:43] 2025-10-12 22:22:12,057 | INFO     | ***************************************
[2025-10-13 00:22:43] 2025-10-12 22:22:12,561 | INFO     | executing command: df -mP /scratch/.boinc/slots/7
[2025-10-13 00:22:43] 2025-10-12 22:22:12,586 | INFO     | sufficient remaining disk space (1681556242432 B)
[2025-10-13 00:22:43] 2025-10-12 22:22:12,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:22:43] 2025-10-12 22:22:12,587 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:22:43] 2025-10-12 22:22:12,587 | INFO     | update_server=False
[2025-10-13 00:22:43] 2025-10-12 22:22:12,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:22:43] 2025-10-12 22:22:12,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:22:43] 2025-10-12 22:22:12,931 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 00:22:43] 2025-10-12 22:22:12,931 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 00:22:43] 2025-10-12 22:22:12,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:22:43] 2025-10-12 22:22:12,931 | INFO     | will abort loop
[2025-10-13 00:22:43] 2025-10-12 22:22:13,294 | INFO     | all data control threads have been joined
[2025-10-13 00:22:43] 2025-10-12 22:22:13,401 | INFO     | all payload control threads have been joined
[2025-10-13 00:22:43] 2025-10-12 22:22:13,592 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:13,850 | INFO     | all job control threads have been joined
[2025-10-13 00:22:43] 2025-10-12 22:22:13,937 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,172 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,296 | INFO     | [data] control thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,406 | INFO     | [payload] control thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,418 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,502 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,537 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,549 | INFO     | [job] validate thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,593 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,867 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:14,983 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:15,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:22:43] 2025-10-12 22:22:15,032 | INFO     | [job] control thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:15,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:22:43] 2025-10-12 22:22:16,361 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:22:43] 2025-10-12 22:22:16,392 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:19,031 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:23,499 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:22:43] 2025-10-12 22:22:24,504 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:22:43] 2025-10-12 22:22:26,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369606240064)>', '<ExcThread(monitor, started 140369077442304)>']
[2025-10-13 00:22:43] 2025-10-12 22:22:31,056 | INFO     | all workflow threads have been joined
[2025-10-13 00:22:43] 2025-10-12 22:22:31,056 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:22:43] 2025-10-12 22:22:31,057 | INFO     | traces error code: 0
[2025-10-13 00:22:43] 2025-10-12 22:22:31,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:22:43] 2025-10-12 22:22:43,122 | INFO     | PID=2048537 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:22:43] 2025-10-12 22:22:43,122 | INFO     | .. there are 8 such processes running
[2025-10-13 00:22:43] 2025-10-12 22:22:43,123 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:22:43] 2025-10-12 22:22:43,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:22:43] 2025-10-12 22:22:43,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:22:43] 2025-10-12 22:22:43,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:22:43] 2025-10-12 22:22:43,124 | INFO     | [monitor] control thread has ended
[2025-10-13 00:22:43] 2025-10-12 22:22:43,242 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:22:43] 2025-10-12 22:22:43,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:22:43] 2025-10-12 22:22:43,250 [wrapper] pilotpid: 2048537
[2025-10-13 00:22:43] 2025-10-12 22:22:43,253 [wrapper] Pilot exit status: 0
[2025-10-13 00:22:43] 2025-10-12 22:22:43,268 [wrapper] pandaids: 6840182021
[2025-10-13 00:22:43] 2025-10-12 22:22:43,345 [wrapper] cleanup supervisor_pilot 2175652 2048538
[2025-10-13 00:22:43] 2025-10-12 22:22:43,350 [wrapper] Test setup, not cleaning
[2025-10-13 00:22:43] 2025-10-12 22:22:43,353 [wrapper] apfmon messages muted
[2025-10-13 00:22:43] 2025-10-12 22:22:43,356 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:22:43] 2025-10-12 22:22:43,360 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:22:43]  *** Error codes and diagnostics ***
[2025-10-13 00:22:43]     "exeErrorCode": 0,
[2025-10-13 00:22:43]     "exeErrorDiag": "",
[2025-10-13 00:22:43]     "pilotErrorCode": 0,
[2025-10-13 00:22:43]     "pilotErrorDiag": "",
[2025-10-13 00:22:43]  *** Listing of results directory ***
[2025-10-13 00:22:43] total 408008
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc    557409 Oct 12 16:30 pilot3.tar.gz
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:34 queuedata.json
[2025-10-13 00:22:43] -rwx------ 1 boinc boinc     36292 Oct 12 16:34 runpilot2-wrapper.sh
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:22:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:27 run_atlas
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:27 job.xml
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc      6665 Oct 12 23:27 init_data.xml
[2025-10-13 00:22:43] -rw-r--r-- 2 boinc boinc 221103769 Oct 12 23:27 EVNT.46676267._004247.pool.root.1
[2025-10-13 00:22:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:27 start_atlas.sh
[2025-10-13 00:22:43] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:27 shared
[2025-10-13 00:22:43] -rw-r--r-- 2 boinc boinc    569686 Oct 12 23:27 input.tar.gz
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:27 boinc_lockfile
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc      2550 Oct 12 23:27 pandaJob.out
[2025-10-13 00:22:43] -rw------- 1 boinc boinc    975528 Oct 12 23:28 agis_schedconf.cvmfs.json
[2025-10-13 00:22:43] -rw------- 1 boinc boinc   1560580 Oct 12 23:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:22:43] drwx------ 5 boinc boinc      4096 Oct 12 23:28 pilot3
[2025-10-13 00:22:43] -rw------- 1 boinc boinc 191066765 Oct 13 00:21 HITS.46676269._080881.pool.root.1
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc       530 Oct 13 00:21 boinc_task_state.xml
[2025-10-13 00:22:43] -rw------- 1 boinc boinc      1023 Oct 13 00:22 memory_monitor_summary.json
[2025-10-13 00:22:43] -rw------- 1 boinc boinc    373928 Oct 13 00:22 log.46676269._080881.job.log.tgz.1
[2025-10-13 00:22:43] -rw------- 1 boinc boinc      7784 Oct 13 00:22 heartbeat.json
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:22 boinc_mmap_file
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:22 wrapper_checkpoint.txt
[2025-10-13 00:22:43] -rw------- 1 boinc boinc        95 Oct 13 00:22 pilot_heartbeat.json
[2025-10-13 00:22:43] -rw------- 1 boinc boinc       822 Oct 13 00:22 pilotlog.txt
[2025-10-13 00:22:43] -rw------- 1 boinc boinc    489985 Oct 13 00:22 log.46676269._080881.job.log.1
[2025-10-13 00:22:43] -rw------- 1 boinc boinc       357 Oct 13 00:22 output.list
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:22 runtime_log
[2025-10-13 00:22:43] -rw------- 1 boinc boinc    880640 Oct 13 00:22 result.tar.gz
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc      8764 Oct 13 00:22 runtime_log.err
[2025-10-13 00:22:43] -rw------- 1 boinc boinc       663 Oct 13 00:22 lqfKDmlKCS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmo7TMDm7r28Bo.diag
[2025-10-13 00:22:43] -rw-r--r-- 1 boinc boinc     22131 Oct 13 00:22 stderr.txt
[2025-10-13 00:22:43] HITS file was successfully produced:
[2025-10-13 00:22:43] -rw------- 1 boinc boinc 191066765 Oct 13 00:21 shared/HITS.pool.root.1
[2025-10-13 00:22:43]  *** Contents of shared directory: ***
[2025-10-13 00:22:43] total 403960
[2025-10-13 00:22:43] -rw-r--r-- 2 boinc boinc 221103769 Oct 12 23:27 ATLAS.root_0
[2025-10-13 00:22:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:27 start_atlas.sh
[2025-10-13 00:22:43] -rw-r--r-- 2 boinc boinc    569686 Oct 12 23:27 input.tar.gz
[2025-10-13 00:22:43] -rw------- 1 boinc boinc 191066765 Oct 13 00:21 HITS.pool.root.1
[2025-10-13 00:22:43] -rw------- 1 boinc boinc    880640 Oct 13 00:22 result.tar.gz
00:22:45 (2044460): run_atlas exited; CPU time 34228.745503
00:22:45 (2044460): called boinc_finish(0)

</stderr_txt>
]]>

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