Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:31:46 (580878): wrapper (7.7.26015): starting
10:31:46 (580878): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 10:31:46] Arguments: --nthreads 4
[2025-10-13 10:31:46] Threads: 4
[2025-10-13 10:31:46] Checking for CVMFS
[2025-10-13 10:31:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:31:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:31:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:31:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:31:47] 2.9.2.0 2853088 5532 99144 151654 2 56 28851275 36864001 0 130560 0 4976879 99.992 189518 830 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 10:31:47] CVMFS is ok
[2025-10-13 10:31:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:31:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:31:47] Further information can be found at the LHC@home message board.
[2025-10-13 10:31:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:31:47] Checking for apptainer binary...
[2025-10-13 10:31:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:31:47] Running /usr/bin/apptainer --version
[2025-10-13 10:31:47] apptainer version 1.4.1-1.1
[2025-10-13 10:31:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:31:47] atlasA139a
[2025-10-13 10:31:47] apptainer works
[2025-10-13 10:31:47] Set ATHENA_PROC_NUMBER=4
[2025-10-13 10:31:47] Set ATHENA_CORE_NUMBER=4
[2025-10-13 10:31:47] Starting ATLAS job with PandaID=6840081617
[2025-10-13 10:31:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:44:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:44:06]  status=None
[2025-10-13 11:44:06]  status_code=0
[2025-10-13 11:44:06]  storage_token=
[2025-10-13 11:44:06]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6840081617/log.46676269._079772.job.log.tgz.1
[2025-10-13 11:44:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/1b/log.46676269._079772.job.log.tgz.1
[2025-10-13 11:44:06]  workdir=None
[2025-10-13 11:44:06] ]
[2025-10-13 11:44:06] 2025-10-13 09:43:37,032 | INFO     | transferring file log.46676269._079772.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6840081617/log.46676269._079772.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 11:44:06] 2025-10-13 09:43:37,032 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6840081617/log.46676269._079772.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0797
[2025-10-13 11:44:06] 2025-10-13 09:43:37,052 | INFO     | adding to output.list: log.46676269._079772.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8a/1b/log.46676269._079772.job.log.tg
[2025-10-13 11:44:06] 2025-10-13 09:43:37,053 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 11:44:06] 2025-10-13 09:43:37,053 | INFO     | summary of transferred files:
[2025-10-13 11:44:06] 2025-10-13 09:43:37,053 | INFO     |  -- lfn=log.46676269._079772.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 11:44:06] 2025-10-13 09:43:37,053 | INFO     | stage-out finished correctly
[2025-10-13 11:44:06] 2025-10-13 09:43:37,449 | INFO     | time since job start (4302s) is within the limit (172800.0s)
[2025-10-13 11:44:06] 2025-10-13 09:43:38,105 | WARNING  | process 591238 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 11:44:06] 2025-10-13 09:43:38,105 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840081617/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:44:06] 2025-10-13 09:43:38,146 | INFO     | number of running child processes to parent process 591238: 1
[2025-10-13 11:44:06] 2025-10-13 09:43:38,146 | INFO     | maximum number of monitored processes: 6
[2025-10-13 11:44:06] 2025-10-13 09:43:38,272 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 11:44:06] 2025-10-13 09:43:39,455 | INFO     | time since job start (4304s) is within the limit (172800.0s)
[2025-10-13 11:44:06] 2025-10-13 09:43:39,980 | INFO     | job 6840081617 has state=finished
[2025-10-13 11:44:06] 2025-10-13 09:43:39,980 | INFO     | preparing for final server update for job 6840081617 in state='finished'
[2025-10-13 11:44:06] 2025-10-13 09:43:39,981 | INFO     | this job has now completed (state=finished)
[2025-10-13 11:44:06] 2025-10-13 09:43:39,981 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 11:44:06] 2025-10-13 09:43:39,981 | INFO     | log transfer has been attempted: DONE
[2025-10-13 11:44:06] 2025-10-13 09:43:39,981 | INFO     | job 6840081617 has finished - writing final server update
[2025-10-13 11:44:06] 2025-10-13 09:43:39,981 | INFO     | total number of processed events: 400 (read)
[2025-10-13 11:44:06] 2025-10-13 09:43:39,981 | INFO     | executing command: lscpu
[2025-10-13 11:44:06] 2025-10-13 09:43:40,004 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 11:44:06] 2025-10-13 09:43:40,650 | INFO     | monitor loop #331: job 0:6840081617 is in state 'finished'
[2025-10-13 11:44:06] 2025-10-13 09:43:40,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:44:06] 2025-10-13 09:43:41,462 | INFO     | time since job start (4306s) is within the limit (172800.0s)
[2025-10-13 11:44:06] 2025-10-13 09:43:43,152 | INFO     | monitor loop #332: job 0:6840081617 is in state 'finished'
[2025-10-13 11:44:06] 2025-10-13 09:43:43,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:44:06] 2025-10-13 09:43:43,468 | INFO     | time since job start (4308s) is within the limit (172800.0s)
[2025-10-13 11:44:06] 2025-10-13 09:43:45,335 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 11:44:06] 2025-10-13 09:43:45,337 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 2938.385375
[2025-10-13 11:44:06] 2025-10-13 09:43:45,338 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6840081617/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:44:06] 2025-10-13 09:43:45,338 | INFO     | extracted standard info from prmon json
[2025-10-13 11:44:06] 2025-10-13 09:43:45,338 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:44:06] 2025-10-13 09:43:45,338 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:44:06] 2025-10-13 09:43:45,339 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:44:06] 2025-10-13 09:43:45,339 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:44:06] 2025-10-13 09:43:45,339 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:44:06] 2025-10-13 09:43:45,339 | INFO     | sum of square deviations: 81266640.0
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | sum of deviations: -9240856877.0
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | mean x: 1760346565.5
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | mean y: 2547973.0
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | -- intersect: 200172146047.97894
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | intersect: 200172146047.97894
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | chi2: 0.03576870363982537
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | -- intersect: 200172146047.97894
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | current memory leak: -113.71 B/s (using 64 data points, chi2=0.04)
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | could have reported an average CPU frequency of 3383 MHz (6 samples)
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | ..............................
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | . Timing measurements:
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | . get job = 0 s
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | . initial setup = 1 s
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | . payload setup = 4 s
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | . stage-in = 0 s
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | . payload execution = 4278 s
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | . stage-out = 0 s
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | . log creation = 0 s
[2025-10-13 11:44:06] 2025-10-13 09:43:45,340 | INFO     | ..............................
[2025-10-13 11:44:06] 2025-10-13 09:43:45,474 | INFO     | time since job start (4310s) is within the limit (172800.0s)
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | 
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | job summary report
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | --------------------------------------------------
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | PanDA job id: 6840081617
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | task id: 46676269
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | errors: (none)
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | pilot state: finished 
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | transexitcode: 0
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | exeerrorcode: 0
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | exeerrordiag: 
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | exitcode: 0
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | exitmsg: OK
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | cpuconsumptiontime: 16225 s
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | nevents: 400
[2025-10-13 11:44:06] 2025-10-13 09:43:45,624 | INFO     | neventsw: 0
[2025-10-13 11:44:06] 2025-10-13 09:43:45,625 | INFO     | pid: 591238
[2025-10-13 11:44:06] 2025-10-13 09:43:45,625 | INFO     | pgrp: 591238
[2025-10-13 11:44:06] 2025-10-13 09:43:45,625 | INFO     | corecount: 4
[2025-10-13 11:44:06] 2025-10-13 09:43:45,625 | INFO     | event service: False
[2025-10-13 11:44:06] 2025-10-13 09:43:45,625 | INFO     | sizes: {0: 2348860, 4: 2349122, 11: 2349150, 4287: 2384373, 4289: 2384373, 4296: 2384567}
[2025-10-13 11:44:06] 2025-10-13 09:43:45,625 | INFO     | --------------------------------------------------
[2025-10-13 11:44:06] 2025-10-13 09:43:45,625 | INFO     | 
[2025-10-13 11:44:06] 2025-10-13 09:43:45,625 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,646 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:44:06] 2025-10-13 09:43:45,646 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,646 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:44:06] 2025-10-13 09:43:45,646 | INFO     | job 6840081617 has completed (purged errors)
[2025-10-13 11:44:06] 2025-10-13 09:43:45,646 | INFO     | overall cleanup function is called
[2025-10-13 11:44:06] 2025-10-13 09:43:46,652 | INFO     | --- collectZombieJob: --- 10, [591238]
[2025-10-13 11:44:06] 2025-10-13 09:43:46,653 | INFO     | zombie collector waiting for pid 591238
[2025-10-13 11:44:06] 2025-10-13 09:43:46,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:44:06] 2025-10-13 09:43:46,653 | INFO     | collected zombie processes
[2025-10-13 11:44:06] 2025-10-13 09:43:46,653 | INFO     | will attempt to kill all subprocesses of pid=591238
[2025-10-13 11:44:06] 2025-10-13 09:43:46,699 | INFO     | process IDs to be killed: [591238] (in reverse order)
[2025-10-13 11:44:06] 2025-10-13 09:43:46,734 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:44:06] 2025-10-13 09:43:46,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:44:06] 2025-10-13 09:43:46,736 | INFO     | did not find any defunct processes belonging to 591238
[2025-10-13 11:44:06] 2025-10-13 09:43:46,737 | INFO     | did not find any defunct processes belonging to 591238
[2025-10-13 11:44:06] 2025-10-13 09:43:46,737 | INFO     | ready for new job
[2025-10-13 11:44:06] 2025-10-13 09:43:46,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:44:06] 2025-10-13 09:43:46,738 | INFO     | ***************************************
[2025-10-13 11:44:06] 2025-10-13 09:43:46,738 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:44:06] 2025-10-13 09:43:46,738 | INFO     | ***************************************
[2025-10-13 11:44:06] 2025-10-13 09:43:46,738 | INFO     | 
[2025-10-13 11:44:06] 2025-10-13 09:43:46,738 | INFO     | architecture information:
[2025-10-13 11:44:06] 2025-10-13 09:43:46,739 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:44:06] 2025-10-13 09:43:46,753 | INFO     | cat /etc/os-release:
[2025-10-13 11:44:06] NAME="CentOS Linux"
[2025-10-13 11:44:06] VERSION="7 (Core)"
[2025-10-13 11:44:06] ID="centos"
[2025-10-13 11:44:06] ID_LIKE="rhel fedora"
[2025-10-13 11:44:06] VERSION_ID="7"
[2025-10-13 11:44:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:44:06] ANSI_COLOR="0;31"
[2025-10-13 11:44:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:44:06] HOME_URL="https://www.centos.org/"
[2025-10-13 11:44:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:44:06] 
[2025-10-13 11:44:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:44:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:44:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:44:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:44:06] 
[2025-10-13 11:44:06] 2025-10-13 09:43:46,753 | INFO     | ***************************************
[2025-10-13 11:44:06] 2025-10-13 09:43:47,254 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 11:44:06] 2025-10-13 09:43:47,272 | INFO     | sufficient remaining disk space (329875718144 B)
[2025-10-13 11:44:06] 2025-10-13 09:43:47,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:44:06] 2025-10-13 09:43:47,273 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:44:06] 2025-10-13 09:43:47,273 | INFO     | update_server=False
[2025-10-13 11:44:06] 2025-10-13 09:43:47,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:44:06] 2025-10-13 09:43:47,273 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 11:44:06] 2025-10-13 09:43:47,273 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:44:06] 2025-10-13 09:43:47,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:44:06] 2025-10-13 09:43:47,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:44:06] 2025-10-13 09:43:47,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:44:06] 2025-10-13 09:43:47,274 | INFO     | aborting loop
[2025-10-13 11:44:06] 2025-10-13 09:43:47,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:44:06] 2025-10-13 09:43:47,588 | INFO     | all payload control threads have been joined
[2025-10-13 11:44:06] 2025-10-13 09:43:47,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:44:06] 2025-10-13 09:43:48,191 | INFO     | all data control threads have been joined
[2025-10-13 11:44:06] 2025-10-13 09:43:48,279 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:48,279 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:48,280 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:48,284 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:48,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:48,387 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:48,405 | INFO     | all job control threads have been joined
[2025-10-13 11:44:06] 2025-10-13 09:43:48,588 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:48,593 | INFO     | [payload] control thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:48,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:44:06] 2025-10-13 09:43:48,965 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:49,018 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:49,197 | INFO     | [data] control thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:49,377 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:49,410 | INFO     | [job] control thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:49,612 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:49,626 | INFO     | [job] validate thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:43:52,833 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:44:06] 2025-10-13 09:44:00,710 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:44:06] 2025-10-13 09:44:01,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140414064596800)>', '<ExcThread(monitor, started 140413109249792)>']
[2025-10-13 11:44:06] 2025-10-13 09:44:02,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:44:06] 2025-10-13 09:44:02,347 | INFO     | [monitor] control thread has ended
[2025-10-13 11:44:06] 2025-10-13 09:44:06,496 | INFO     | all workflow threads have been joined
[2025-10-13 11:44:06] 2025-10-13 09:44:06,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:44:06] 2025-10-13 09:44:06,496 | INFO     | traces error code: 0
[2025-10-13 11:44:06] 2025-10-13 09:44:06,496 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:44:06] 2025-10-13 09:44:06,579 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:44:06] 2025-10-13 09:44:06,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:44:06] 2025-10-13 09:44:06,587 [wrapper] pilotpid: 584656
[2025-10-13 11:44:06] 2025-10-13 09:44:06,592 [wrapper] Pilot exit status: 0
[2025-10-13 11:44:06] 2025-10-13 09:44:06,605 [wrapper] pandaids: 6840081617
[2025-10-13 11:44:06] 2025-10-13 09:44:06,629 [wrapper] cleanup supervisor_pilot  600939 584657
[2025-10-13 11:44:06] 2025-10-13 09:44:06,633 [wrapper] Test setup, not cleaning
[2025-10-13 11:44:06] 2025-10-13 09:44:06,637 [wrapper] apfmon messages muted
[2025-10-13 11:44:06] 2025-10-13 09:44:06,641 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:44:06] 2025-10-13 09:44:06,645 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:44:06]  *** Error codes and diagnostics ***
[2025-10-13 11:44:06]     "exeErrorCode": 0,
[2025-10-13 11:44:06]     "exeErrorDiag": "",
[2025-10-13 11:44:06]     "pilotErrorCode": 0,
[2025-10-13 11:44:06]     "pilotErrorDiag": "",
[2025-10-13 11:44:06]  *** Listing of results directory ***
[2025-10-13 11:44:06] total 408432
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:22 pilot3.tar.gz
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:41 queuedata.json
[2025-10-13 11:44:06] -rwx------ 1 boinc boinc     36292 Oct 12 15:43 runpilot2-wrapper.sh
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:44:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:31 run_atlas
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:31 job.xml
[2025-10-13 11:44:06] -rw-r--r-- 2 boinc boinc 219249616 Oct 13 10:31 EVNT.46676267._004018.pool.root.1
[2025-10-13 11:44:06] -rw-r--r-- 2 boinc boinc    569682 Oct 13 10:31 input.tar.gz
[2025-10-13 11:44:06] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:31 start_atlas.sh
[2025-10-13 11:44:06] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:31 shared
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:31 boinc_setup_complete
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc      6382 Oct 13 10:31 init_data.xml
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:31 boinc_lockfile
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:31 pandaJob.out
[2025-10-13 11:44:06] -rw------- 1 boinc boinc    972857 Oct 13 10:31 agis_schedconf.cvmfs.json
[2025-10-13 11:44:06] -rw------- 1 boinc boinc   1560580 Oct 13 10:31 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:44:06] drwx------ 5 boinc boinc      4096 Oct 13 10:31 pilot3
[2025-10-13 11:44:06] -rw------- 1 boinc boinc 193297547 Oct 13 11:43 HITS.46676269._079772.pool.root.1
[2025-10-13 11:44:06] -rw------- 1 boinc boinc        95 Oct 13 11:43 pilot_heartbeat.json
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc       529 Oct 13 11:43 boinc_task_state.xml
[2025-10-13 11:44:06] -rw------- 1 boinc boinc      1022 Oct 13 11:43 memory_monitor_summary.json
[2025-10-13 11:44:06] -rw------- 1 boinc boinc    255332 Oct 13 11:43 log.46676269._079772.job.log.tgz.1
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:43 boinc_mmap_file
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:43 wrapper_checkpoint.txt
[2025-10-13 11:44:06] -rw------- 1 boinc boinc      7777 Oct 13 11:43 heartbeat.json
[2025-10-13 11:44:06] -rw------- 1 boinc boinc      4556 Oct 13 11:44 pilotlog.txt
[2025-10-13 11:44:06] -rw------- 1 boinc boinc    638349 Oct 13 11:44 log.46676269._079772.job.log.1
[2025-10-13 11:44:06] -rw------- 1 boinc boinc       357 Oct 13 11:44 output.list
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:44 runtime_log
[2025-10-13 11:44:06] -rw------- 1 boinc boinc    911360 Oct 13 11:44 result.tar.gz
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc      8797 Oct 13 11:44 runtime_log.err
[2025-10-13 11:44:06] -rw------- 1 boinc boinc       662 Oct 13 11:44 kZ2LDmbXBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmM4jNDmZenefm.diag
[2025-10-13 11:44:06] -rw-r--r-- 1 boinc boinc     21920 Oct 13 11:44 stderr.txt
[2025-10-13 11:44:06] HITS file was successfully produced:
[2025-10-13 11:44:06] -rw------- 1 boinc boinc 193297547 Oct 13 11:43 shared/HITS.pool.root.1
[2025-10-13 11:44:06]  *** Contents of shared directory: ***
[2025-10-13 11:44:06] total 404356
[2025-10-13 11:44:06] -rw-r--r-- 2 boinc boinc 219249616 Oct 13 10:31 ATLAS.root_0
[2025-10-13 11:44:06] -rw-r--r-- 2 boinc boinc    569682 Oct 13 10:31 input.tar.gz
[2025-10-13 11:44:06] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:31 start_atlas.sh
[2025-10-13 11:44:06] -rw------- 1 boinc boinc 193297547 Oct 13 11:43 HITS.pool.root.1
[2025-10-13 11:44:06] -rw------- 1 boinc boinc    911360 Oct 13 11:44 result.tar.gz
11:44:08 (580878): run_atlas exited; CPU time 16237.570599
11:44:08 (580878): called boinc_finish(0)

</stderr_txt>
]]>

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