Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:40:01 (17475): wrapper (7.7.26015): starting
13:40:01 (17475): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:40:01] Arguments: --nthreads 8
[2025-10-12 13:40:01] Threads: 8
[2025-10-12 13:40:01] Checking for CVMFS
[2025-10-12 13:40:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:40:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:40:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:40:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:40:02] 2.11.2.0 2860 1225 65548 151629 1 57 16116901 20275200 1 130560 0 853429 99.989 42535 33865 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:40:02] CVMFS is ok
[2025-10-12 13:40:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:40:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:40:02] Further information can be found at the LHC@home message board.
[2025-10-12 13:40:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:40:02] Checking for apptainer binary...
[2025-10-12 13:40:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:40:02] Running /usr/bin/apptainer --version
[2025-10-12 13:40:02] apptainer version 1.3.2-1.el7
[2025-10-12 13:40:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:40:03] c-204-9.aglt2.org
[2025-10-12 13:40:03] apptainer works
[2025-10-12 13:40:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:40:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:40:04] Starting ATLAS job with PandaID=6840181700
[2025-10-12 13:40:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:46:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:46:40] 2025-10-12 19:45:50,631 | INFO     | -- intersect: -57475747786.65577
[2025-10-12 15:46:40] 2025-10-12 19:45:50,631 | INFO     | intersect: -57475747786.65577
[2025-10-12 15:46:40] 2025-10-12 19:45:50,631 | INFO     | chi2: 1.3271082031188115
[2025-10-12 15:46:40] 2025-10-12 19:45:50,632 | INFO     | sum of square deviations: 509440249.5
[2025-10-12 15:46:40] 2025-10-12 19:45:50,632 | INFO     | sum of deviations: 17957185124.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,633 | INFO     | mean x: 1760294421.5
[2025-10-12 15:46:40] 2025-10-12 19:45:50,633 | INFO     | mean y: 2486115.627118644
[2025-10-12 15:46:40] 2025-10-12 19:45:50,633 | INFO     | -- intersect: -62045875455.02648
[2025-10-12 15:46:40] 2025-10-12 19:45:50,633 | INFO     | intersect: -62045875455.02648
[2025-10-12 15:46:40] 2025-10-12 19:45:50,633 | INFO     | chi2: 1.3284961198289238
[2025-10-12 15:46:40] 2025-10-12 19:45:50,633 | INFO     | current chi2=1.3284961198289238 (change=-0.10458203082842643 %)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,633 | INFO     | right removable region: 117
[2025-10-12 15:46:40] 2025-10-12 19:45:50,634 | INFO     | sum of square deviations: 509440249.5
[2025-10-12 15:46:40] 2025-10-12 19:45:50,634 | INFO     | sum of deviations: 1942943330.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,634 | INFO     | mean x: 1760294726.5
[2025-10-12 15:46:40] 2025-10-12 19:45:50,635 | INFO     | mean y: 2525485.4237288134
[2025-10-12 15:46:40] 2025-10-12 19:45:50,635 | INFO     | -- intersect: -6711025124.376192
[2025-10-12 15:46:40] 2025-10-12 19:45:50,635 | INFO     | intersect: -6711025124.376192
[2025-10-12 15:46:40] 2025-10-12 19:45:50,635 | INFO     | chi2: 0.017333780452516864
[2025-10-12 15:46:40] 2025-10-12 19:45:50,635 | INFO     | current chi2=0.017333780452516864 (change=98.69386833629834 %)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,636 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,636 | INFO     | sum of deviations: 2474045564.0000005
[2025-10-12 15:46:40] 2025-10-12 19:45:50,636 | INFO     | mean x: 1760294879.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,636 | INFO     | mean y: 2524130.743362832
[2025-10-12 15:46:40] 2025-10-12 19:45:50,637 | INFO     | -- intersect: -9731969779.261095
[2025-10-12 15:46:40] 2025-10-12 19:45:50,637 | INFO     | intersect: -9731969779.261095
[2025-10-12 15:46:40] 2025-10-12 19:45:50,637 | INFO     | chi2: 0.0008292425891099064
[2025-10-12 15:46:40] 2025-10-12 19:45:50,637 | INFO     | current chi2=0.0008292425891099064 (change=95.2160315438315 %)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,637 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,638 | INFO     | sum of deviations: 1825551392.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,638 | INFO     | mean x: 1760295031.5
[2025-10-12 15:46:40] 2025-10-12 19:45:50,638 | INFO     | mean y: 2525858.5555555555
[2025-10-12 15:46:40] 2025-10-12 19:45:50,638 | INFO     | -- intersect: -8224958618.446002
[2025-10-12 15:46:40] 2025-10-12 19:45:50,638 | INFO     | intersect: -8224958618.446002
[2025-10-12 15:46:40] 2025-10-12 19:45:50,639 | INFO     | chi2: 0.0003589165744798208
[2025-10-12 15:46:40] 2025-10-12 19:45:50,639 | INFO     | current chi2=0.0003589165744798208 (change=56.71754210488933 %)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,639 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,639 | INFO     | sum of deviations: 1467984764.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,640 | INFO     | mean x: 1760295184.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,640 | INFO     | mean y: 2526911.5436893203
[2025-10-12 15:46:40] 2025-10-12 19:45:50,640 | INFO     | -- intersect: -7624545843.603183
[2025-10-12 15:46:40] 2025-10-12 19:45:50,640 | INFO     | intersect: -7624545843.603183
[2025-10-12 15:46:40] 2025-10-12 19:45:50,640 | INFO     | chi2: 0.0003120552110027304
[2025-10-12 15:46:40] 2025-10-12 19:45:50,640 | INFO     | current chi2=0.0003120552110027304 (change=13.056338661708985 %)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,640 | INFO     | left removable region: 40
[2025-10-12 15:46:40] 2025-10-12 19:45:50,641 | INFO     | sum of square deviations: 141539398.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,641 | INFO     | sum of deviations: 428193648.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,641 | INFO     | mean x: 1760295611.0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,641 | INFO     | mean y: 2530121.4935064935
[2025-10-12 15:46:40] 2025-10-12 19:45:50,641 | INFO     | -- intersect: -5322823878.051404
[2025-10-12 15:46:40] 2025-10-12 19:45:50,642 | INFO     | intersect: -5322823878.051404
[2025-10-12 15:46:40] 2025-10-12 19:45:50,642 | INFO     | chi2: 0.00011771701294473725
[2025-10-12 15:46:40] 2025-10-12 19:45:50,642 | INFO     | -- intersect: -5322823878.051404
[2025-10-12 15:46:40] 2025-10-12 19:45:50,642 | INFO     | current memory leak: 3.03 B/s (using 77 data points, chi2=0.00)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,643 | INFO     | could have reported an average CPU frequency of 1920 MHz (8 samples)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,643 | INFO     | ..............................
[2025-10-12 15:46:40] 2025-10-12 19:45:50,643 | INFO     | . Timing measurements:
[2025-10-12 15:46:40] 2025-10-12 19:45:50,643 | INFO     | . get job = 0 s
[2025-10-12 15:46:40] 2025-10-12 19:45:50,643 | INFO     | . initial setup = 2 s
[2025-10-12 15:46:40] 2025-10-12 19:45:50,643 | INFO     | . payload setup = 8 s
[2025-10-12 15:46:40] 2025-10-12 19:45:50,643 | INFO     | . stage-in = 0 s
[2025-10-12 15:46:40] 2025-10-12 19:45:50,644 | INFO     | . payload execution = 7489 s
[2025-10-12 15:46:40] 2025-10-12 19:45:50,644 | INFO     | . stage-out = 0 s
[2025-10-12 15:46:40] 2025-10-12 19:45:50,644 | INFO     | . log creation = 0 s
[2025-10-12 15:46:40] 2025-10-12 19:45:50,644 | INFO     | ..............................
[2025-10-12 15:46:40] 2025-10-12 19:45:50,739 | INFO     | 
[2025-10-12 15:46:40] 2025-10-12 19:45:50,739 | INFO     | job summary report
[2025-10-12 15:46:40] 2025-10-12 19:45:50,739 | INFO     | --------------------------------------------------
[2025-10-12 15:46:40] 2025-10-12 19:45:50,740 | INFO     | PanDA job id: 6840181700
[2025-10-12 15:46:40] 2025-10-12 19:45:50,740 | INFO     | task id: 46676269
[2025-10-12 15:46:40] 2025-10-12 19:45:50,740 | INFO     | errors: (none)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,740 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:46:40] 2025-10-12 19:45:50,740 | INFO     | pilot state: finished 
[2025-10-12 15:46:40] 2025-10-12 19:45:50,741 | INFO     | transexitcode: 0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,741 | INFO     | exeerrorcode: 0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,741 | INFO     | exeerrordiag: 
[2025-10-12 15:46:40] 2025-10-12 19:45:50,741 | INFO     | exitcode: 0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,741 | INFO     | exitmsg: OK
[2025-10-12 15:46:40] 2025-10-12 19:45:50,741 | INFO     | cpuconsumptiontime: 54470 s
[2025-10-12 15:46:40] 2025-10-12 19:45:50,742 | INFO     | nevents: 400
[2025-10-12 15:46:40] 2025-10-12 19:45:50,742 | INFO     | neventsw: 0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,742 | INFO     | pid: 27595
[2025-10-12 15:46:40] 2025-10-12 19:45:50,742 | INFO     | pgrp: 27595
[2025-10-12 15:46:40] 2025-10-12 19:45:50,742 | INFO     | corecount: 8
[2025-10-12 15:46:40] 2025-10-12 19:45:50,742 | INFO     | event service: False
[2025-10-12 15:46:40] 2025-10-12 19:45:50,742 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 7501: 2376720, 7503: 2385902, 7512: 2386040}
[2025-10-12 15:46:40] 2025-10-12 19:45:50,743 | INFO     | --------------------------------------------------
[2025-10-12 15:46:40] 2025-10-12 19:45:50,743 | INFO     | 
[2025-10-12 15:46:40] 2025-10-12 19:45:50,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:46:40] 2025-10-12 19:45:50,771 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,772 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,773 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,773 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,773 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,773 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,774 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,774 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:46:40] 2025-10-12 19:45:50,775 | INFO     | job 6840181700 has completed (purged errors)
[2025-10-12 15:46:40] 2025-10-12 19:45:50,775 | INFO     | overall cleanup function is called
[2025-10-12 15:46:40] 2025-10-12 19:45:51,783 | INFO     | --- collectZombieJob: --- 10, [27595]
[2025-10-12 15:46:40] 2025-10-12 19:45:51,783 | INFO     | zombie collector waiting for pid 27595
[2025-10-12 15:46:40] 2025-10-12 19:45:51,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:46:40] 2025-10-12 19:45:51,784 | INFO     | collected zombie processes
[2025-10-12 15:46:40] 2025-10-12 19:45:51,784 | INFO     | will attempt to kill all subprocesses of pid=27595
[2025-10-12 15:46:40] 2025-10-12 19:45:51,880 | INFO     | process IDs to be killed: [27595] (in reverse order)
[2025-10-12 15:46:40] 2025-10-12 19:45:51,942 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:46:40] 2025-10-12 19:45:51,942 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:46:40] 2025-10-12 19:45:51,946 | INFO     | did not find any defunct processes belonging to 27595
[2025-10-12 15:46:40] 2025-10-12 19:45:51,950 | INFO     | did not find any defunct processes belonging to 27595
[2025-10-12 15:46:40] 2025-10-12 19:45:51,950 | INFO     | ready for new job
[2025-10-12 15:46:40] 2025-10-12 19:45:51,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:46:40] 2025-10-12 19:45:51,953 | INFO     | ***************************************
[2025-10-12 15:46:40] 2025-10-12 19:45:51,953 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:46:40] 2025-10-12 19:45:51,953 | INFO     | ***************************************
[2025-10-12 15:46:40] 2025-10-12 19:45:51,953 | INFO     | 
[2025-10-12 15:46:40] 2025-10-12 19:45:51,954 | INFO     | architecture information:
[2025-10-12 15:46:40] 2025-10-12 19:45:51,954 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:46:40] 2025-10-12 19:45:51,971 | INFO     | cat /etc/os-release:
[2025-10-12 15:46:40] NAME="CentOS Linux"
[2025-10-12 15:46:40] VERSION="7 (Core)"
[2025-10-12 15:46:40] ID="centos"
[2025-10-12 15:46:40] ID_LIKE="rhel fedora"
[2025-10-12 15:46:40] VERSION_ID="7"
[2025-10-12 15:46:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:46:40] ANSI_COLOR="0;31"
[2025-10-12 15:46:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:46:40] HOME_URL="https://www.centos.org/"
[2025-10-12 15:46:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:46:40] 
[2025-10-12 15:46:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:46:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:46:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:46:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:46:40] 
[2025-10-12 15:46:40] 2025-10-12 19:45:51,972 | INFO     | ***************************************
[2025-10-12 15:46:40] 2025-10-12 19:45:52,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:46:40] 2025-10-12 19:45:52,495 | INFO     | sufficient remaining disk space (18594398208 B)
[2025-10-12 15:46:40] 2025-10-12 19:45:52,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:46:40] 2025-10-12 19:45:52,496 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:46:40] 2025-10-12 19:45:52,496 | INFO     | update_server=False
[2025-10-12 15:46:40] 2025-10-12 19:45:52,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:46:40] 2025-10-12 19:45:52,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:46:40] 2025-10-12 19:45:52,497 | INFO     | aborting loop
[2025-10-12 15:46:40] 2025-10-12 19:45:52,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:46:40] 2025-10-12 19:45:52,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:46:40] 2025-10-12 19:45:52,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:46:40] 2025-10-12 19:45:53,089 | INFO     | all payload control threads have been joined
[2025-10-12 15:46:40] 2025-10-12 19:45:53,348 | INFO     | all job control threads have been joined
[2025-10-12 15:46:40] 2025-10-12 19:45:53,498 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:53,501 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:53,503 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:53,552 | INFO     | all data control threads have been joined
[2025-10-12 15:46:40] 2025-10-12 19:45:53,659 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:53,659 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:53,914 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:54,095 | INFO     | [payload] control thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:54,105 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:54,352 | INFO     | [job] control thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:54,428 | INFO     | [job] validate thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:54,504 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:54,558 | INFO     | [data] control thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:54,725 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:54,924 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:45:56,835 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:46:03,485 | INFO     | job.realtimelogging is not enabled
[2025-10-12 15:46:40] 2025-10-12 19:46:04,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:46:40] 2025-10-12 19:46:23,021 | INFO     | PID=21160 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:46:40] 2025-10-12 19:46:23,022 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:46:40] 2025-10-12 19:46:23,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:46:40] 2025-10-12 19:46:23,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:46:40] 2025-10-12 19:46:33,473 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:46:40] 2025-10-12 19:46:35,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697209202496)>', '<ExcThread(monitor, started 139695958783744)>']
[2025-10-12 15:46:40] 2025-10-12 19:46:36,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:46:40] 2025-10-12 19:46:36,088 | INFO     | [monitor] control thread has ended
[2025-10-12 15:46:40] 2025-10-12 19:46:40,333 | INFO     | all workflow threads have been joined
[2025-10-12 15:46:40] 2025-10-12 19:46:40,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:46:40] 2025-10-12 19:46:40,333 | INFO     | traces error code: 0
[2025-10-12 15:46:40] 2025-10-12 19:46:40,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:46:40] 2025-10-12 19:46:40,441 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:46:40] 2025-10-12 19:46:40,446 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:46:40] 2025-10-12 19:46:40,450 [wrapper] pilotpid: 21160
[2025-10-12 15:46:40] 2025-10-12 19:46:40,455 [wrapper] Pilot exit status: 0
[2025-10-12 15:46:40] 2025-10-12 19:46:40,473 [wrapper] pandaids: 6840181700
[2025-10-12 15:46:40] 2025-10-12 19:46:40,526 [wrapper] cleanup supervisor_pilot 20228 21163
[2025-10-12 15:46:40] 2025-10-12 19:46:40,532 [wrapper] Test setup, not cleaning
[2025-10-12 15:46:40] 2025-10-12 19:46:40,537 [wrapper] apfmon messages muted
[2025-10-12 15:46:40] 2025-10-12 19:46:40,543 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:46:40] 2025-10-12 19:46:40,548 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:46:40]  *** Error codes and diagnostics ***
[2025-10-12 15:46:40]     "exeErrorCode": 0,
[2025-10-12 15:46:40]     "exeErrorDiag": "",
[2025-10-12 15:46:40]     "pilotErrorCode": 0,
[2025-10-12 15:46:40]     "pilotErrorDiag": "",
[2025-10-12 15:46:40]  *** Listing of results directory ***
[2025-10-12 15:46:40] total 409620
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 10:22 queuedata.json
[2025-10-12 15:46:40] -rwx------ 1 boincer umatlas     36292 Oct 12 10:22 runpilot2-wrapper.sh
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:46:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:40 run_atlas
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:40 job.xml
[2025-10-12 15:46:40] -rw-r--r-- 2 boincer umatlas 218946687 Oct 12 13:40 EVNT.46676267._004228.pool.root.1
[2025-10-12 15:46:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:40 start_atlas.sh
[2025-10-12 15:46:40] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:40 shared
[2025-10-12 15:46:40] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 13:40 input.tar.gz
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:40 boinc_lockfile
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:40 pandaJob.out
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas    975528 Oct 12 13:40 agis_schedconf.cvmfs.json
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas   1560580 Oct 12 13:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:46:40] drwx------ 5 boincer umatlas      4096 Oct 12 13:40 pilot3
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas      5908 Oct 12 15:45 init_data.xml
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas 193731756 Oct 12 15:45 HITS.46676269._080575.pool.root.1
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas       529 Oct 12 15:45 boinc_task_state.xml
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas      1050 Oct 12 15:45 memory_monitor_summary.json
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas    368998 Oct 12 15:45 log.46676269._080575.job.log.tgz.1
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas      7840 Oct 12 15:45 heartbeat.json
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas        95 Oct 12 15:46 pilot_heartbeat.json
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:46 boinc_mmap_file
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas        27 Oct 12 15:46 wrapper_checkpoint.txt
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas      4818 Oct 12 15:46 pilotlog.txt
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas   1065719 Oct 12 15:46 log.46676269._080575.job.log.1
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas       357 Oct 12 15:46 output.list
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:46 runtime_log
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas   1454080 Oct 12 15:46 result.tar.gz
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 15:46 runtime_log.err
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas       657 Oct 12 15:46 GfKODme8BS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmi4TMDm1zk65m.diag
[2025-10-12 15:46:40] -rw-r--r-- 1 boincer umatlas     20843 Oct 12 15:46 stderr.txt
[2025-10-12 15:46:40] HITS file was successfully produced:
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas 193731756 Oct 12 15:45 shared/HITS.pool.root.1
[2025-10-12 15:46:40]  *** Contents of shared directory: ***
[2025-10-12 15:46:40] total 405008
[2025-10-12 15:46:40] -rw-r--r-- 2 boincer umatlas 218946687 Oct 12 13:40 ATLAS.root_0
[2025-10-12 15:46:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:40 start_atlas.sh
[2025-10-12 15:46:40] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 13:40 input.tar.gz
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas 193731756 Oct 12 15:45 HITS.pool.root.1
[2025-10-12 15:46:40] -rw------- 1 boincer umatlas   1454080 Oct 12 15:46 result.tar.gz
15:46:41 (17475): run_atlas exited; CPU time 54445.290495
15:46:41 (17475): called boinc_finish(0)

</stderr_txt>
]]>

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