Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:34:24 (12021): wrapper (7.7.26015): starting
13:34:24 (12021): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:34:24] Arguments: --nthreads 8
[2025-10-12 13:34:24] Threads: 8
[2025-10-12 13:34:24] Checking for CVMFS
[2025-10-12 13:34:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:34:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:34:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:34:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:34:24] 2.11.2.0 2857 3142 72332 151629 0 56 14844417 20275200 1 130560 0 2217585 99.990 107797 34728 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:34:24] CVMFS is ok
[2025-10-12 13:34:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:34:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:34:24] Further information can be found at the LHC@home message board.
[2025-10-12 13:34:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:34:24] Checking for apptainer binary...
[2025-10-12 13:34:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:34:24] Running /usr/bin/apptainer --version
[2025-10-12 13:34:25] apptainer version 1.3.2-1.el7
[2025-10-12 13:34:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:34:26] c-204-10.aglt2.org
[2025-10-12 13:34:26] apptainer works
[2025-10-12 13:34:26] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:34:26] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:34:26] Starting ATLAS job with PandaID=6839592030
[2025-10-12 13:34:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:34:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:34:02] 2025-10-12 19:33:16,605 | INFO     | chi2: 1.4502641910963288
[2025-10-12 15:34:02] 2025-10-12 19:33:16,605 | INFO     | current chi2=1.4502641910963288 (change=-0.18746490046478728 %)
[2025-10-12 15:34:02] 2025-10-12 19:33:16,605 | INFO     | right removable region: 110
[2025-10-12 15:34:02] 2025-10-12 19:33:16,605 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,606 | INFO     | sum of deviations: -6696696815.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,606 | INFO     | mean x: 1760294175.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,606 | INFO     | mean y: 2540597.756756757
[2025-10-12 15:34:02] 2025-10-12 19:33:16,606 | INFO     | -- intersect: 27801835359.629646
[2025-10-12 15:34:02] 2025-10-12 19:33:16,606 | INFO     | intersect: 27801835359.629646
[2025-10-12 15:34:02] 2025-10-12 19:33:16,607 | INFO     | chi2: 0.0774842832782437
[2025-10-12 15:34:02] 2025-10-12 19:33:16,607 | INFO     | current chi2=0.0774842832782437 (change=94.64721396354115 %)
[2025-10-12 15:34:02] 2025-10-12 19:33:16,607 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 15:34:02] 2025-10-12 19:33:16,608 | INFO     | sum of deviations: -3297939105.5000014
[2025-10-12 15:34:02] 2025-10-12 19:33:16,608 | INFO     | mean x: 1760294327.5
[2025-10-12 15:34:02] 2025-10-12 19:33:16,608 | INFO     | mean y: 2531097.216981132
[2025-10-12 15:34:02] 2025-10-12 19:33:16,608 | INFO     | -- intersect: 15723183163.065872
[2025-10-12 15:34:02] 2025-10-12 19:33:16,608 | INFO     | intersect: 15723183163.065872
[2025-10-12 15:34:02] 2025-10-12 19:33:16,608 | INFO     | chi2: 0.05758406921018773
[2025-10-12 15:34:02] 2025-10-12 19:33:16,609 | INFO     | current chi2=0.05758406921018773 (change=25.682903972402908 %)
[2025-10-12 15:34:02] 2025-10-12 19:33:16,609 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,609 | INFO     | sum of deviations: 728899736.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,609 | INFO     | mean x: 1760294480.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,610 | INFO     | mean y: 2518764.7425742573
[2025-10-12 15:34:02] 2025-10-12 19:33:16,610 | INFO     | -- intersect: -4014030984.314298
[2025-10-12 15:34:02] 2025-10-12 19:33:16,610 | INFO     | intersect: -4014030984.314298
[2025-10-12 15:34:02] 2025-10-12 19:33:16,610 | INFO     | chi2: 0.01239980642166201
[2025-10-12 15:34:02] 2025-10-12 19:33:16,610 | INFO     | current chi2=0.01239980642166201 (change=78.46660267026031 %)
[2025-10-12 15:34:02] 2025-10-12 19:33:16,610 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,611 | INFO     | sum of deviations: 1222055944.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,611 | INFO     | mean x: 1760294632.5
[2025-10-12 15:34:02] 2025-10-12 19:33:16,611 | INFO     | mean y: 2517211.75
[2025-10-12 15:34:02] 2025-10-12 19:33:16,611 | INFO     | -- intersect: -7839566174.277277
[2025-10-12 15:34:02] 2025-10-12 19:33:16,611 | INFO     | intersect: -7839566174.277277
[2025-10-12 15:34:02] 2025-10-12 19:33:16,612 | INFO     | chi2: 0.00027548035015436377
[2025-10-12 15:34:02] 2025-10-12 19:33:16,612 | INFO     | current chi2=0.00027548035015436377 (change=97.77834959041691 %)
[2025-10-12 15:34:02] 2025-10-12 19:33:16,612 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,612 | INFO     | sum of deviations: 948641743.9999999
[2025-10-12 15:34:02] 2025-10-12 19:33:16,613 | INFO     | mean x: 1760294785.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,613 | INFO     | mean y: 2518236.89010989
[2025-10-12 15:34:02] 2025-10-12 19:33:16,613 | INFO     | -- intersect: -7144707198.429453
[2025-10-12 15:34:02] 2025-10-12 19:33:16,613 | INFO     | intersect: -7144707198.429453
[2025-10-12 15:34:02] 2025-10-12 19:33:16,613 | INFO     | chi2: 0.00023648205899287923
[2025-10-12 15:34:02] 2025-10-12 19:33:16,613 | INFO     | current chi2=0.00023648205899287923 (change=14.156469287058798 %)
[2025-10-12 15:34:02] 2025-10-12 19:33:16,613 | INFO     | left removable region: 50
[2025-10-12 15:34:02] 2025-10-12 19:33:16,614 | INFO     | sum of square deviations: 66959395.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,614 | INFO     | sum of deviations: 116007970.0
[2025-10-12 15:34:02] 2025-10-12 19:33:16,614 | INFO     | mean x: 1760295364.5
[2025-10-12 15:34:02] 2025-10-12 19:33:16,614 | INFO     | mean y: 2522145.2
[2025-10-12 15:34:02] 2025-10-12 19:33:16,614 | INFO     | -- intersect: -3047211082.4681273
[2025-10-12 15:34:02] 2025-10-12 19:33:16,614 | INFO     | intersect: -3047211082.4681273
[2025-10-12 15:34:02] 2025-10-12 19:33:16,615 | INFO     | chi2: 2.1828359307193195e-05
[2025-10-12 15:34:02] 2025-10-12 19:33:16,615 | INFO     | -- intersect: -3047211082.4681273
[2025-10-12 15:34:02] 2025-10-12 19:33:16,615 | INFO     | current memory leak: 1.73 B/s (using 60 data points, chi2=0.00)
[2025-10-12 15:34:02] 2025-10-12 19:33:16,615 | INFO     | could have reported an average CPU frequency of 1947 MHz (7 samples)
[2025-10-12 15:34:02] 2025-10-12 19:33:16,615 | INFO     | ..............................
[2025-10-12 15:34:02] 2025-10-12 19:33:16,615 | INFO     | . Timing measurements:
[2025-10-12 15:34:02] 2025-10-12 19:33:16,616 | INFO     | . get job = 0 s
[2025-10-12 15:34:02] 2025-10-12 19:33:16,616 | INFO     | . initial setup = 2 s
[2025-10-12 15:34:02] 2025-10-12 19:33:16,616 | INFO     | . payload setup = 8 s
[2025-10-12 15:34:02] 2025-10-12 19:33:16,616 | INFO     | . stage-in = 0 s
[2025-10-12 15:34:02] 2025-10-12 19:33:16,616 | INFO     | . payload execution = 7074 s
[2025-10-12 15:34:02] 2025-10-12 19:33:16,616 | INFO     | . stage-out = 0 s
[2025-10-12 15:34:02] 2025-10-12 19:33:16,616 | INFO     | . log creation = 0 s
[2025-10-12 15:34:02] 2025-10-12 19:33:16,616 | INFO     | ..............................
[2025-10-12 15:34:02] 2025-10-12 19:33:17,132 | INFO     | 
[2025-10-12 15:34:02] 2025-10-12 19:33:17,132 | INFO     | job summary report
[2025-10-12 15:34:02] 2025-10-12 19:33:17,133 | INFO     | --------------------------------------------------
[2025-10-12 15:34:02] 2025-10-12 19:33:17,133 | INFO     | PanDA job id: 6839592030
[2025-10-12 15:34:02] 2025-10-12 19:33:17,133 | INFO     | task id: 46676269
[2025-10-12 15:34:02] 2025-10-12 19:33:17,133 | INFO     | errors: (none)
[2025-10-12 15:34:02] 2025-10-12 19:33:17,133 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:34:02] 2025-10-12 19:33:17,134 | INFO     | pilot state: finished 
[2025-10-12 15:34:02] 2025-10-12 19:33:17,134 | INFO     | transexitcode: 0
[2025-10-12 15:34:02] 2025-10-12 19:33:17,134 | INFO     | exeerrorcode: 0
[2025-10-12 15:34:02] 2025-10-12 19:33:17,134 | INFO     | exeerrordiag: 
[2025-10-12 15:34:02] 2025-10-12 19:33:17,134 | INFO     | exitcode: 0
[2025-10-12 15:34:02] 2025-10-12 19:33:17,134 | INFO     | exitmsg: OK
[2025-10-12 15:34:02] 2025-10-12 19:33:17,135 | INFO     | cpuconsumptiontime: 52722 s
[2025-10-12 15:34:02] 2025-10-12 19:33:17,135 | INFO     | nevents: 400
[2025-10-12 15:34:02] 2025-10-12 19:33:17,135 | INFO     | neventsw: 0
[2025-10-12 15:34:02] 2025-10-12 19:33:17,135 | INFO     | pid: 23053
[2025-10-12 15:34:02] 2025-10-12 19:33:17,135 | INFO     | pgrp: 23053
[2025-10-12 15:34:02] 2025-10-12 19:33:17,135 | INFO     | corecount: 8
[2025-10-12 15:34:02] 2025-10-12 19:33:17,136 | INFO     | event service: False
[2025-10-12 15:34:02] 2025-10-12 19:33:17,136 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7086: 2376373, 7087: 2385371, 7088: 2385427, 7095: 2385749}
[2025-10-12 15:34:02] 2025-10-12 19:33:17,136 | INFO     | --------------------------------------------------
[2025-10-12 15:34:02] 2025-10-12 19:33:17,136 | INFO     | 
[2025-10-12 15:34:02] 2025-10-12 19:33:17,136 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:34:02] 2025-10-12 19:33:17,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,164 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,164 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,167 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:34:02] 2025-10-12 19:33:17,167 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,167 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:34:02] 2025-10-12 19:33:17,168 | INFO     | job 6839592030 has completed (purged errors)
[2025-10-12 15:34:02] 2025-10-12 19:33:17,168 | INFO     | overall cleanup function is called
[2025-10-12 15:34:02] 2025-10-12 19:33:18,176 | INFO     | --- collectZombieJob: --- 10, [23053]
[2025-10-12 15:34:02] 2025-10-12 19:33:18,176 | INFO     | zombie collector waiting for pid 23053
[2025-10-12 15:34:02] 2025-10-12 19:33:18,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:34:02] 2025-10-12 19:33:18,177 | INFO     | collected zombie processes
[2025-10-12 15:34:02] 2025-10-12 19:33:18,177 | INFO     | will attempt to kill all subprocesses of pid=23053
[2025-10-12 15:34:02] 2025-10-12 19:33:18,273 | INFO     | process IDs to be killed: [23053] (in reverse order)
[2025-10-12 15:34:02] 2025-10-12 19:33:18,323 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:34:02] 2025-10-12 19:33:18,324 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:34:02] 2025-10-12 19:33:18,328 | INFO     | did not find any defunct processes belonging to 23053
[2025-10-12 15:34:02] 2025-10-12 19:33:18,332 | INFO     | did not find any defunct processes belonging to 23053
[2025-10-12 15:34:02] 2025-10-12 19:33:18,332 | INFO     | ready for new job
[2025-10-12 15:34:02] 2025-10-12 19:33:18,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:34:02] 2025-10-12 19:33:18,334 | INFO     | ***************************************
[2025-10-12 15:34:02] 2025-10-12 19:33:18,335 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:34:02] 2025-10-12 19:33:18,335 | INFO     | ***************************************
[2025-10-12 15:34:02] 2025-10-12 19:33:18,335 | INFO     | 
[2025-10-12 15:34:02] 2025-10-12 19:33:18,335 | INFO     | architecture information:
[2025-10-12 15:34:02] 2025-10-12 19:33:18,336 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:34:02] 2025-10-12 19:33:18,356 | INFO     | cat /etc/os-release:
[2025-10-12 15:34:02] NAME="CentOS Linux"
[2025-10-12 15:34:02] VERSION="7 (Core)"
[2025-10-12 15:34:02] ID="centos"
[2025-10-12 15:34:02] ID_LIKE="rhel fedora"
[2025-10-12 15:34:02] VERSION_ID="7"
[2025-10-12 15:34:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:34:02] ANSI_COLOR="0;31"
[2025-10-12 15:34:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:34:02] HOME_URL="https://www.centos.org/"
[2025-10-12 15:34:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:34:02] 
[2025-10-12 15:34:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:34:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:34:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:34:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:34:02] 
[2025-10-12 15:34:02] 2025-10-12 19:33:18,356 | INFO     | ***************************************
[2025-10-12 15:34:02] 2025-10-12 19:33:18,860 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:34:02] 2025-10-12 19:33:18,880 | INFO     | sufficient remaining disk space (18590203904 B)
[2025-10-12 15:34:02] 2025-10-12 19:33:18,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:34:02] 2025-10-12 19:33:18,881 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:34:02] 2025-10-12 19:33:18,881 | INFO     | update_server=False
[2025-10-12 15:34:02] 2025-10-12 19:33:18,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:34:02] 2025-10-12 19:33:19,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:34:02] 2025-10-12 19:33:19,213 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 15:34:02] 2025-10-12 19:33:19,213 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 15:34:02] 2025-10-12 19:33:19,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:34:02] 2025-10-12 19:33:19,214 | INFO     | will abort loop
[2025-10-12 15:34:02] 2025-10-12 19:33:19,284 | INFO     | all payload control threads have been joined
[2025-10-12 15:34:02] 2025-10-12 19:33:19,291 | INFO     | all data control threads have been joined
[2025-10-12 15:34:02] 2025-10-12 19:33:19,887 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:20,138 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:20,146 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:20,207 | INFO     | all job control threads have been joined
[2025-10-12 15:34:02] 2025-10-12 19:33:20,219 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:20,290 | INFO     | [payload] control thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:20,296 | INFO     | [data] control thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:20,551 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:20,615 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:20,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:20,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:34:02] 2025-10-12 19:33:21,146 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:21,155 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:21,179 | INFO     | [job] validate thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:21,211 | INFO     | [job] control thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:21,461 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:21,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:34:02] 2025-10-12 19:33:22,717 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:24,918 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:34:02] 2025-10-12 19:33:49,580 | INFO     | PID=15808 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:34:02] 2025-10-12 19:33:49,581 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:34:02] 2025-10-12 19:33:49,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:34:02] 2025-10-12 19:33:49,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:34:02] 2025-10-12 19:33:55,428 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:34:02] 2025-10-12 19:33:57,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342648342336)>', '<ExcThread(monitor, started 140341411837696)>']
[2025-10-12 15:34:02] 2025-10-12 19:33:57,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:34:02] 2025-10-12 19:33:57,622 | INFO     | [monitor] control thread has ended
[2025-10-12 15:34:02] 2025-10-12 19:34:02,269 | INFO     | all workflow threads have been joined
[2025-10-12 15:34:02] 2025-10-12 19:34:02,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:34:02] 2025-10-12 19:34:02,270 | INFO     | traces error code: 0
[2025-10-12 15:34:02] 2025-10-12 19:34:02,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:34:02] 2025-10-12 19:34:02,386 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:34:02] 2025-10-12 19:34:02,391 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:34:02] 2025-10-12 19:34:02,395 [wrapper] pilotpid: 15808
[2025-10-12 15:34:02] 2025-10-12 19:34:02,401 [wrapper] Pilot exit status: 0
[2025-10-12 15:34:02] 2025-10-12 19:34:02,422 [wrapper] pandaids: 6839592030
[2025-10-12 15:34:02] 2025-10-12 19:34:02,477 [wrapper] cleanup supervisor_pilot 10468 15809
[2025-10-12 15:34:02] 2025-10-12 19:34:02,482 [wrapper] Test setup, not cleaning
[2025-10-12 15:34:02] 2025-10-12 19:34:02,487 [wrapper] apfmon messages muted
[2025-10-12 15:34:02] 2025-10-12 19:34:02,492 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:34:02] 2025-10-12 19:34:02,497 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:34:02]  *** Error codes and diagnostics ***
[2025-10-12 15:34:02]     "exeErrorCode": 0,
[2025-10-12 15:34:02]     "exeErrorDiag": "",
[2025-10-12 15:34:02]     "pilotErrorCode": 0,
[2025-10-12 15:34:02]     "pilotErrorDiag": "",
[2025-10-12 15:34:02]  *** Listing of results directory ***
[2025-10-12 15:34:02] total 410640
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:44 pilot3.tar.gz
[2025-10-12 15:34:02] -rwx------ 1 boincer umatlas     36292 Oct 12 02:51 runpilot2-wrapper.sh
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:51 queuedata.json
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:34:02] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:34 run_atlas
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:34 job.xml
[2025-10-12 15:34:02] -rw-r--r-- 2 boincer umatlas 222309372 Oct 12 13:34 EVNT.46676267._004529.pool.root.1
[2025-10-12 15:34:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:34 start_atlas.sh
[2025-10-12 15:34:02] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:34 shared
[2025-10-12 15:34:02] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 13:34 input.tar.gz
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:34 boinc_lockfile
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:34 pandaJob.out
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas    975528 Oct 12 13:34 agis_schedconf.cvmfs.json
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas   1560580 Oct 12 13:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:34:02] drwx------ 5 boincer umatlas      4096 Oct 12 13:34 pilot3
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 15:31 init_data.xml
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas 191552968 Oct 12 15:32 HITS.46676269._073132.pool.root.1
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas       529 Oct 12 15:32 boinc_task_state.xml
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas      1051 Oct 12 15:33 memory_monitor_summary.json
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas    364120 Oct 12 15:33 log.46676269._073132.job.log.tgz.1
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas      7842 Oct 12 15:33 heartbeat.json
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas        95 Oct 12 15:33 pilot_heartbeat.json
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:33 boinc_mmap_file
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas        27 Oct 12 15:33 wrapper_checkpoint.txt
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas      4932 Oct 12 15:34 pilotlog.txt
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas   1003899 Oct 12 15:34 log.46676269._073132.job.log.1
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas       357 Oct 12 15:34 output.list
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:34 runtime_log
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas   1382400 Oct 12 15:34 result.tar.gz
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 15:34 runtime_log.err
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas       659 Oct 12 15:34 cgpLDmK64R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCPTMDmDVLBMo.diag
[2025-10-12 15:34:02] -rw-r--r-- 1 boincer umatlas     20912 Oct 12 15:34 stderr.txt
[2025-10-12 15:34:02] HITS file was successfully produced:
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas 191552968 Oct 12 15:32 shared/HITS.pool.root.1
[2025-10-12 15:34:02]  *** Contents of shared directory: ***
[2025-10-12 15:34:02] total 406096
[2025-10-12 15:34:02] -rw-r--r-- 2 boincer umatlas 222309372 Oct 12 13:34 ATLAS.root_0
[2025-10-12 15:34:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:34 start_atlas.sh
[2025-10-12 15:34:02] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 13:34 input.tar.gz
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas 191552968 Oct 12 15:32 HITS.pool.root.1
[2025-10-12 15:34:02] -rw------- 1 boincer umatlas   1382400 Oct 12 15:34 result.tar.gz
15:34:04 (12021): run_atlas exited; CPU time 52733.922653
15:34:04 (12021): called boinc_finish(0)

</stderr_txt>
]]>

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