Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
18:11:58 (2577019): wrapper (7.7.26015): starting
18:11:58 (2577019): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 18:11:58] Arguments: --nthreads 12
[2025-10-12 18:11:58] Threads: 12
[2025-10-12 18:11:58] Checking for CVMFS
[2025-10-12 18:11:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:11:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:11:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:11:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:11:59] 2.11.0.0 3299214 3405 88088 151631 0 188 5421484 6144000 14166 130560 0 66783032 100.000 124594 191 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 18:11:59] CVMFS is ok
[2025-10-12 18:11:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:11:59] Checking for apptainer binary...
[2025-10-12 18:11:59] apptainer is not installed, using version from CVMFS
[2025-10-12 18:11:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:11:59] radiat0r
[2025-10-12 18:11:59] apptainer works
[2025-10-12 18:11:59] Set ATHENA_PROC_NUMBER=12
[2025-10-12 18:11:59] Set ATHENA_CORE_NUMBER=12
[2025-10-12 18:11:59] Starting ATLAS job with PandaID=6839821863
[2025-10-12 18:11:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:02:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:02:25]  status=None
[2025-10-12 19:02:25]  status_code=0
[2025-10-12 19:02:25]  storage_token=
[2025-10-12 19:02:25]  surl=/var/lib/boinc/slots/23/PanDA_Pilot-6839821863/log.46676269._075184.job.log.tgz.1
[2025-10-12 19:02:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/ec/log.46676269._075184.job.log.tgz.1
[2025-10-12 19:02:25]  workdir=None
[2025-10-12 19:02:25] ]
[2025-10-12 19:02:25] 2025-10-12 19:01:20,087 | INFO     | transferring file log.46676269._075184.job.log.tgz.1 from /var/lib/boinc/slots/23/PanDA_Pilot-6839821863/log.46676269._075184.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 19:02:25] 2025-10-12 19:01:20,087 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/23/PanDA_Pilot-6839821863/log.46676269._075184.job.log.tgz.1 /var/lib/boinc/slots/23/log.46676269._075184.j
[2025-10-12 19:02:25] 2025-10-12 19:01:20,117 | INFO     | adding to output.list: log.46676269._075184.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/ec/log.46676269._075184.job.log.tg
[2025-10-12 19:02:25] 2025-10-12 19:01:20,118 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 19:02:25] 2025-10-12 19:01:20,118 | INFO     | summary of transferred files:
[2025-10-12 19:02:25] 2025-10-12 19:01:20,118 | INFO     |  -- lfn=log.46676269._075184.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 19:02:25] 2025-10-12 19:01:20,119 | INFO     | stage-out finished correctly
[2025-10-12 19:02:25] 2025-10-12 19:01:20,651 | INFO     | time since job start (2946s) is within the limit (172800.0s)
[2025-10-12 19:02:25] 2025-10-12 19:01:21,370 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 19:02:25] 2025-10-12 19:01:21,465 | INFO     | job 6839821863 has state=finished
[2025-10-12 19:02:25] 2025-10-12 19:01:21,465 | INFO     | preparing for final server update for job 6839821863 in state='finished'
[2025-10-12 19:02:25] 2025-10-12 19:01:21,466 | INFO     | this job has now completed (state=finished)
[2025-10-12 19:02:25] 2025-10-12 19:01:21,466 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 19:02:25] 2025-10-12 19:01:21,466 | INFO     | log transfer has been attempted: DONE
[2025-10-12 19:02:25] 2025-10-12 19:01:21,466 | INFO     | job 6839821863 has finished - writing final server update
[2025-10-12 19:02:25] 2025-10-12 19:01:21,466 | INFO     | total number of processed events: 400 (read)
[2025-10-12 19:02:25] 2025-10-12 19:01:21,469 | INFO     | executing command: lscpu
[2025-10-12 19:02:25] 2025-10-12 19:01:21,664 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 19:02:25] 2025-10-12 19:01:22,658 | INFO     | time since job start (2948s) is within the limit (172800.0s)
[2025-10-12 19:02:25] 2025-10-12 19:01:23,151 | WARNING  | process 2592534 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 19:02:25] 2025-10-12 19:01:23,151 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-6839821863/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:02:25] 2025-10-12 19:01:24,013 | INFO     | number of running child processes to parent process 2592534: 1
[2025-10-12 19:02:25] 2025-10-12 19:01:24,014 | INFO     | maximum number of monitored processes: 6
[2025-10-12 19:02:25] 2025-10-12 19:01:24,663 | INFO     | time since job start (2950s) is within the limit (172800.0s)
[2025-10-12 19:02:25] 2025-10-12 19:01:26,517 | INFO     | monitor loop #206: job 0:6839821863 is in state 'finished'
[2025-10-12 19:02:25] 2025-10-12 19:01:26,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:02:25] 2025-10-12 19:01:26,668 | INFO     | time since job start (2952s) is within the limit (172800.0s)
[2025-10-12 19:02:25] 2025-10-12 19:01:28,590 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 19:02:25] 2025-10-12 19:01:28,653 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2360.589578124999
[2025-10-12 19:02:25] 2025-10-12 19:01:28,673 | INFO     | time since job start (2954s) is within the limit (172800.0s)
[2025-10-12 19:02:25] 2025-10-12 19:01:28,704 | INFO     | using path: /var/lib/boinc/slots/23/PanDA_Pilot-6839821863/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:02:25] 2025-10-12 19:01:28,705 | INFO     | extracted standard info from prmon json
[2025-10-12 19:02:25] 2025-10-12 19:01:28,705 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:02:25] 2025-10-12 19:01:28,705 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:02:25] 2025-10-12 19:01:28,706 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:02:25] 2025-10-12 19:01:28,706 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:02:25] 2025-10-12 19:01:28,707 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:02:25] 2025-10-12 19:01:28,707 | INFO     | sum of square deviations: 21358540.0
[2025-10-12 19:02:25] 2025-10-12 19:01:28,708 | INFO     | sum of deviations: -448326454.0
[2025-10-12 19:02:25] 2025-10-12 19:01:28,708 | INFO     | mean x: 1760294291.0
[2025-10-12 19:02:25] 2025-10-12 19:01:28,708 | INFO     | mean y: 2684165.2926829266
[2025-10-12 19:02:25] 2025-10-12 19:01:28,708 | INFO     | -- intersect: 36952143139.57061
[2025-10-12 19:02:25] 2025-10-12 19:01:28,708 | INFO     | intersect: 36952143139.57061
[2025-10-12 19:02:25] 2025-10-12 19:01:28,708 | INFO     | chi2: 0.0013073740484356058
[2025-10-12 19:02:25] 2025-10-12 19:01:28,708 | INFO     | -- intersect: 36952143139.57061
[2025-10-12 19:02:25] 2025-10-12 19:01:28,708 | INFO     | current memory leak: -20.99 B/s (using 41 data points, chi2=0.00)
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | could have reported an average CPU frequency of 2317 MHz (5 samples)
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | ..............................
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | . Timing measurements:
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | . get job = 0 s
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | . initial setup = 3 s
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | . payload setup = 8 s
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | . stage-in = 0 s
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | . payload execution = 2914 s
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | . stage-out = 0 s
[2025-10-12 19:02:25] 2025-10-12 19:01:28,709 | INFO     | . log creation = 0 s
[2025-10-12 19:02:25] 2025-10-12 19:01:28,710 | INFO     | ..............................
[2025-10-12 19:02:25] 2025-10-12 19:01:28,807 | INFO     | 
[2025-10-12 19:02:25] 2025-10-12 19:01:28,807 | INFO     | job summary report
[2025-10-12 19:02:25] 2025-10-12 19:01:28,807 | INFO     | --------------------------------------------------
[2025-10-12 19:02:25] 2025-10-12 19:01:28,807 | INFO     | PanDA job id: 6839821863
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | task id: 46676269
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | errors: (none)
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | pilot state: finished 
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | transexitcode: 0
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | exeerrorcode: 0
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | exeerrordiag: 
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | exitcode: 0
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | exitmsg: OK
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | cpuconsumptiontime: 30163 s
[2025-10-12 19:02:25] 2025-10-12 19:01:28,808 | INFO     | nevents: 400
[2025-10-12 19:02:25] 2025-10-12 19:01:28,809 | INFO     | neventsw: 0
[2025-10-12 19:02:25] 2025-10-12 19:01:28,809 | INFO     | pid: 2592534
[2025-10-12 19:02:25] 2025-10-12 19:01:28,809 | INFO     | pgrp: 2592534
[2025-10-12 19:02:25] 2025-10-12 19:01:28,809 | INFO     | corecount: 12
[2025-10-12 19:02:25] 2025-10-12 19:01:28,809 | INFO     | event service: False
[2025-10-12 19:02:25] 2025-10-12 19:01:28,809 | INFO     | sizes: {0: 2348687, 1: 2348886, 7: 2349148, 11: 2349176, 2927: 2374568, 2928: 2374567, 2929: 2383751, 2930: 2383807, 2937: 2384033}
[2025-10-12 19:02:25] 2025-10-12 19:01:28,809 | INFO     | --------------------------------------------------
[2025-10-12 19:02:25] 2025-10-12 19:01:28,809 | INFO     | 
[2025-10-12 19:02:25] 2025-10-12 19:01:28,809 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-10-12 19:02:25] 2025-10-12 19:01:28,837 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,838 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,838 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,838 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:02:25] 2025-10-12 19:01:28,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,840 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:02:25] 2025-10-12 19:01:28,840 | INFO     | job 6839821863 has completed (purged errors)
[2025-10-12 19:02:25] 2025-10-12 19:01:28,840 | INFO     | overall cleanup function is called
[2025-10-12 19:02:25] 2025-10-12 19:01:29,850 | INFO     | --- collectZombieJob: --- 10, [2592534]
[2025-10-12 19:02:25] 2025-10-12 19:01:29,851 | INFO     | zombie collector waiting for pid 2592534
[2025-10-12 19:02:25] 2025-10-12 19:01:29,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:02:25] 2025-10-12 19:01:29,851 | INFO     | collected zombie processes
[2025-10-12 19:02:25] 2025-10-12 19:01:29,851 | INFO     | will attempt to kill all subprocesses of pid=2592534
[2025-10-12 19:02:25] 2025-10-12 19:01:30,686 | INFO     | process IDs to be killed: [2592534] (in reverse order)
[2025-10-12 19:02:25] 2025-10-12 19:01:30,955 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:02:25] 2025-10-12 19:01:30,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:02:25] 2025-10-12 19:01:30,985 | INFO     | did not find any defunct processes belonging to 2592534
[2025-10-12 19:02:25] 2025-10-12 19:01:31,012 | INFO     | did not find any defunct processes belonging to 2592534
[2025-10-12 19:02:25] 2025-10-12 19:01:31,012 | INFO     | ready for new job
[2025-10-12 19:02:25] 2025-10-12 19:01:31,013 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:02:25] 2025-10-12 19:01:31,015 | INFO     | ***************************************
[2025-10-12 19:02:25] 2025-10-12 19:01:31,015 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:02:25] 2025-10-12 19:01:31,015 | INFO     | ***************************************
[2025-10-12 19:02:25] 2025-10-12 19:01:31,015 | INFO     | 
[2025-10-12 19:02:25] 2025-10-12 19:01:31,057 | INFO     | architecture information:
[2025-10-12 19:02:25] 2025-10-12 19:01:31,058 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:02:25] 2025-10-12 19:01:31,078 | INFO     | cat /etc/os-release:
[2025-10-12 19:02:25] NAME="CentOS Linux"
[2025-10-12 19:02:25] VERSION="7 (Core)"
[2025-10-12 19:02:25] ID="centos"
[2025-10-12 19:02:25] ID_LIKE="rhel fedora"
[2025-10-12 19:02:25] VERSION_ID="7"
[2025-10-12 19:02:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:02:25] ANSI_COLOR="0;31"
[2025-10-12 19:02:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:02:25] HOME_URL="https://www.centos.org/"
[2025-10-12 19:02:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:02:25] 
[2025-10-12 19:02:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:02:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:02:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:02:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:02:25] 
[2025-10-12 19:02:25] 2025-10-12 19:01:31,079 | INFO     | ***************************************
[2025-10-12 19:02:25] 2025-10-12 19:01:31,582 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-10-12 19:02:25] 2025-10-12 19:01:31,608 | INFO     | sufficient remaining disk space (1724206022656 B)
[2025-10-12 19:02:25] 2025-10-12 19:01:31,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:02:25] 2025-10-12 19:01:31,609 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:02:25] 2025-10-12 19:01:31,609 | INFO     | update_server=False
[2025-10-12 19:02:25] 2025-10-12 19:01:31,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:02:25] 2025-10-12 19:01:31,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:02:25] 2025-10-12 19:01:31,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:02:25] 2025-10-12 19:01:32,216 | INFO     | all payload control threads have been joined
[2025-10-12 19:02:25] 2025-10-12 19:01:32,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:02:25] 2025-10-12 19:01:32,527 | INFO     | aborting loop
[2025-10-12 19:02:25] 2025-10-12 19:01:32,606 | INFO     | all data control threads have been joined
[2025-10-12 19:02:25] 2025-10-12 19:01:32,613 | INFO     | all job control threads have been joined
[2025-10-12 19:02:25] 2025-10-12 19:01:32,614 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,034 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,066 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,084 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,221 | INFO     | [payload] control thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,530 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,578 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,610 | INFO     | [data] control thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,614 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,618 | INFO     | [job] control thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:02:25] 2025-10-12 19:01:33,826 | INFO     | [job] validate thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:33,926 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:34,085 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:34,818 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:35,978 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:01:42,382 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:02:25] 2025-10-12 19:01:43,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:02:25] 2025-10-12 19:02:02,682 | INFO     | PID=2581781 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 19:02:25] 2025-10-12 19:02:02,682 | INFO     | .. there are 16 such processes running
[2025-10-12 19:02:25] 2025-10-12 19:02:02,683 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:02:25] 2025-10-12 19:02:02,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:02:25] 2025-10-12 19:02:02,683 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:02:25] 2025-10-12 19:02:18,981 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:02:25] 2025-10-12 19:02:20,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572172359488)>', '<ExcThread(monitor, started 140571595241216)>']
[2025-10-12 19:02:25] 2025-10-12 19:02:20,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:02:25] 2025-10-12 19:02:20,759 | INFO     | [monitor] control thread has ended
[2025-10-12 19:02:25] 2025-10-12 19:02:25,126 | INFO     | all workflow threads have been joined
[2025-10-12 19:02:25] 2025-10-12 19:02:25,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:02:25] 2025-10-12 19:02:25,127 | INFO     | traces error code: 0
[2025-10-12 19:02:25] 2025-10-12 19:02:25,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:02:25] 2025-10-12 19:02:25,273 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:02:25] 2025-10-12 19:02:25,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:02:25] 2025-10-12 19:02:25,280 [wrapper] pilotpid: 2581781
[2025-10-12 19:02:25] 2025-10-12 19:02:25,284 [wrapper] Pilot exit status: 0
[2025-10-12 19:02:25] 2025-10-12 19:02:25,297 [wrapper] pandaids: 6839821863
[2025-10-12 19:02:25] 2025-10-12 19:02:25,475 [wrapper] cleanup supervisor_pilot 2995659 2581782
[2025-10-12 19:02:25] 2025-10-12 19:02:25,479 [wrapper] Test setup, not cleaning
[2025-10-12 19:02:25] 2025-10-12 19:02:25,483 [wrapper] apfmon messages muted
[2025-10-12 19:02:25] 2025-10-12 19:02:25,487 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:02:25] 2025-10-12 19:02:25,491 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:02:25]  *** Error codes and diagnostics ***
[2025-10-12 19:02:25]     "exeErrorCode": 0,
[2025-10-12 19:02:25]     "exeErrorDiag": "",
[2025-10-12 19:02:25]     "pilotErrorCode": 0,
[2025-10-12 19:02:25]     "pilotErrorDiag": "",
[2025-10-12 19:02:25]  *** Listing of results directory ***
[2025-10-12 19:02:25] total 409764
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc    557409 Oct 12 09:04 pilot3.tar.gz
[2025-10-12 19:02:25] -rwx------ 1 boinc boinc     36292 Oct 12 09:18 runpilot2-wrapper.sh
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc      5112 Oct 12 09:18 queuedata.json
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:02:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:11 run_atlas
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:11 job.xml
[2025-10-12 19:02:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:11 start_atlas.sh
[2025-10-12 19:02:25] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:11 shared
[2025-10-12 19:02:25] -rw-r--r-- 2 boinc boinc    569681 Oct 12 18:11 input.tar.gz
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc      9396 Oct 12 18:11 init_data.xml
[2025-10-12 19:02:25] -rw-r--r-- 2 boinc boinc 223930483 Oct 12 18:11 EVNT.46676267._003567.pool.root.1
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:11 boinc_setup_complete
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:11 boinc_lockfile
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:11 pandaJob.out
[2025-10-12 19:02:25] -rw------- 1 boinc boinc    975528 Oct 12 18:12 agis_schedconf.cvmfs.json
[2025-10-12 19:02:25] -rw------- 1 boinc boinc   1560580 Oct 12 18:12 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:02:25] drwx------ 5 boinc boinc      4096 Oct 12 18:12 pilot3
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc       529 Oct 12 19:00 boinc_task_state.xml
[2025-10-12 19:02:25] -rw------- 1 boinc boinc 190118533 Oct 12 19:00 HITS.46676269._075184.pool.root.1
[2025-10-12 19:02:25] -rw------- 1 boinc boinc      1028 Oct 12 19:01 memory_monitor_summary.json
[2025-10-12 19:02:25] -rw------- 1 boinc boinc    375841 Oct 12 19:01 log.46676269._075184.job.log.tgz.1
[2025-10-12 19:02:25] -rw------- 1 boinc boinc      7747 Oct 12 19:01 heartbeat.json
[2025-10-12 19:02:25] -rw------- 1 boinc boinc        95 Oct 12 19:02 pilot_heartbeat.json
[2025-10-12 19:02:25] -rw------- 1 boinc boinc      4900 Oct 12 19:02 pilotlog.txt
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:02 boinc_mmap_file
[2025-10-12 19:02:25] -rw------- 1 boinc boinc    442681 Oct 12 19:02 log.46676269._075184.job.log.1
[2025-10-12 19:02:25] -rw------- 1 boinc boinc       357 Oct 12 19:02 output.list
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:02 runtime_log
[2025-10-12 19:02:25] -rw------- 1 boinc boinc    839680 Oct 12 19:02 result.tar.gz
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc      8672 Oct 12 19:02 runtime_log.err
[2025-10-12 19:02:25] -rw------- 1 boinc boinc       643 Oct 12 19:02 HZkMDmfO7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJKjNDmbItQ2m.diag
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:02 wrapper_checkpoint.txt
[2025-10-12 19:02:25] -rw-r--r-- 1 boinc boinc     21731 Oct 12 19:02 stderr.txt
[2025-10-12 19:02:25] HITS file was successfully produced:
[2025-10-12 19:02:25] -rw------- 1 boinc boinc 190118533 Oct 12 19:00 shared/HITS.pool.root.1
[2025-10-12 19:02:25]  *** Contents of shared directory: ***
[2025-10-12 19:02:25] total 405752
[2025-10-12 19:02:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:11 start_atlas.sh
[2025-10-12 19:02:25] -rw-r--r-- 2 boinc boinc    569681 Oct 12 18:11 input.tar.gz
[2025-10-12 19:02:25] -rw-r--r-- 2 boinc boinc 223930483 Oct 12 18:11 ATLAS.root_0
[2025-10-12 19:02:25] -rw------- 1 boinc boinc 190118533 Oct 12 19:00 HITS.pool.root.1
[2025-10-12 19:02:25] -rw------- 1 boinc boinc    839680 Oct 12 19:02 result.tar.gz
19:02:27 (2577019): run_atlas exited; CPU time 30335.361313
19:02:27 (2577019): called boinc_finish(0)

</stderr_txt>
]]>

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