Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
18:19:45 (2666174): wrapper (7.7.26015): starting
18:19:45 (2666174): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 18:19:45] Arguments: --nthreads 12
[2025-10-12 18:19:45] Threads: 12
[2025-10-12 18:19:45] Checking for CVMFS
[2025-10-12 18:19:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:19:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:19:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:19:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:19:46] 2.11.0.0 3299214 3413 85484 151631 0 188 5421484 6144000 13924 130560 0 66991561 100.000 124595 191 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 18:19:46] CVMFS is ok
[2025-10-12 18:19:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:19:46] Checking for apptainer binary...
[2025-10-12 18:19:46] apptainer is not installed, using version from CVMFS
[2025-10-12 18:19:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:19:46] radiat0r
[2025-10-12 18:19:46] apptainer works
[2025-10-12 18:19:46] Set ATHENA_PROC_NUMBER=12
[2025-10-12 18:19:46] Set ATHENA_CORE_NUMBER=12
[2025-10-12 18:19:46] Starting ATLAS job with PandaID=6839590723
[2025-10-12 18:19:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:14:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:14:27]  storage_token=
[2025-10-12 19:14:27]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6839590723/log.46676269._072292.job.log.tgz.1
[2025-10-12 19:14:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/fd/log.46676269._072292.job.log.tgz.1
[2025-10-12 19:14:27]  workdir=None
[2025-10-12 19:14:27] ]
[2025-10-12 19:14:27] 2025-10-12 19:13:42,673 | INFO     | transferring file log.46676269._072292.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6839590723/log.46676269._072292.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 19:14:27] 2025-10-12 19:13:42,674 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6839590723/log.46676269._072292.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._072292.job
[2025-10-12 19:14:27] 2025-10-12 19:13:42,693 | INFO     | adding to output.list: log.46676269._072292.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/fd/log.46676269._072292.job.log.tg
[2025-10-12 19:14:27] 2025-10-12 19:13:42,694 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 19:14:27] 2025-10-12 19:13:42,694 | INFO     | summary of transferred files:
[2025-10-12 19:14:27] 2025-10-12 19:13:42,694 | INFO     |  -- lfn=log.46676269._072292.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 19:14:27] 2025-10-12 19:13:42,695 | INFO     | stage-out finished correctly
[2025-10-12 19:14:27] 2025-10-12 19:13:43,107 | INFO     | time since job start (3223s) is within the limit (172800.0s)
[2025-10-12 19:14:27] 2025-10-12 19:13:44,779 | INFO     | monitor loop #226: job 0:6839590723 is in state 'finished'
[2025-10-12 19:14:27] 2025-10-12 19:13:44,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:14:27] 2025-10-12 19:13:45,113 | INFO     | time since job start (3225s) is within the limit (172800.0s)
[2025-10-12 19:14:27] 2025-10-12 19:13:46,159 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 19:14:27] 2025-10-12 19:13:46,428 | INFO     | job 6839590723 has state=finished
[2025-10-12 19:14:27] 2025-10-12 19:13:46,428 | INFO     | preparing for final server update for job 6839590723 in state='finished'
[2025-10-12 19:14:27] 2025-10-12 19:13:46,429 | INFO     | this job has now completed (state=finished)
[2025-10-12 19:14:27] 2025-10-12 19:13:46,429 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 19:14:27] 2025-10-12 19:13:46,429 | INFO     | log transfer has been attempted: DONE
[2025-10-12 19:14:27] 2025-10-12 19:13:46,429 | INFO     | job 6839590723 has finished - writing final server update
[2025-10-12 19:14:27] 2025-10-12 19:13:46,430 | INFO     | total number of processed events: 400 (read)
[2025-10-12 19:14:27] 2025-10-12 19:13:46,432 | INFO     | executing command: lscpu
[2025-10-12 19:14:27] 2025-10-12 19:13:46,596 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 19:14:27] 2025-10-12 19:13:47,119 | INFO     | time since job start (3227s) is within the limit (172800.0s)
[2025-10-12 19:14:27] 2025-10-12 19:13:47,282 | INFO     | monitor loop #227: job 0:6839590723 is in state 'finished'
[2025-10-12 19:14:27] 2025-10-12 19:13:47,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:14:27] 2025-10-12 19:13:49,125 | INFO     | time since job start (3229s) is within the limit (172800.0s)
[2025-10-12 19:14:27] 2025-10-12 19:13:49,786 | INFO     | monitor loop #228: job 0:6839590723 is in state 'finished'
[2025-10-12 19:14:27] 2025-10-12 19:13:49,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:14:27] 2025-10-12 19:13:51,130 | INFO     | time since job start (3231s) is within the limit (172800.0s)
[2025-10-12 19:14:27] 2025-10-12 19:13:52,289 | INFO     | monitor loop #229: job 0:6839590723 is in state 'finished'
[2025-10-12 19:14:27] 2025-10-12 19:13:52,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:14:27] 2025-10-12 19:13:53,101 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 19:14:27] 2025-10-12 19:13:53,136 | INFO     | time since job start (3233s) is within the limit (172800.0s)
[2025-10-12 19:14:27] 2025-10-12 19:13:53,173 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2338.0235078125006
[2025-10-12 19:14:27] 2025-10-12 19:13:53,246 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6839590723/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:14:27] 2025-10-12 19:13:53,247 | INFO     | extracted standard info from prmon json
[2025-10-12 19:14:27] 2025-10-12 19:13:53,247 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:14:27] 2025-10-12 19:13:53,247 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:14:27] 2025-10-12 19:13:53,247 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:14:27] 2025-10-12 19:13:53,247 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:14:27] 2025-10-12 19:13:53,249 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:14:27] 2025-10-12 19:13:53,249 | INFO     | sum of square deviations: 30168007.5
[2025-10-12 19:14:27] 2025-10-12 19:13:53,250 | INFO     | sum of deviations: -66896656.49999999
[2025-10-12 19:14:27] 2025-10-12 19:13:53,250 | INFO     | mean x: 1760294912.5
[2025-10-12 19:14:27] 2025-10-12 19:13:53,250 | INFO     | mean y: 2669337.2391304346
[2025-10-12 19:14:27] 2025-10-12 19:13:53,250 | INFO     | -- intersect: 3906070783.2978415
[2025-10-12 19:14:27] 2025-10-12 19:13:53,250 | INFO     | intersect: 3906070783.2978415
[2025-10-12 19:14:27] 2025-10-12 19:13:53,250 | INFO     | chi2: 0.0021901507555321816
[2025-10-12 19:14:27] 2025-10-12 19:13:53,250 | INFO     | -- intersect: 3906070783.2978415
[2025-10-12 19:14:27] 2025-10-12 19:13:53,250 | INFO     | current memory leak: -2.22 B/s (using 46 data points, chi2=0.00)
[2025-10-12 19:14:27] 2025-10-12 19:13:53,251 | INFO     | could have reported an average CPU frequency of 2378 MHz (5 samples)
[2025-10-12 19:14:27] 2025-10-12 19:13:53,251 | INFO     | ..............................
[2025-10-12 19:14:27] 2025-10-12 19:13:53,251 | INFO     | . Timing measurements:
[2025-10-12 19:14:27] 2025-10-12 19:13:53,251 | INFO     | . get job = 0 s
[2025-10-12 19:14:27] 2025-10-12 19:13:53,251 | INFO     | . initial setup = 1 s
[2025-10-12 19:14:27] 2025-10-12 19:13:53,251 | INFO     | . payload setup = 8 s
[2025-10-12 19:14:27] 2025-10-12 19:13:53,251 | INFO     | . stage-in = 0 s
[2025-10-12 19:14:27] 2025-10-12 19:13:53,252 | INFO     | . payload execution = 3191 s
[2025-10-12 19:14:27] 2025-10-12 19:13:53,252 | INFO     | . stage-out = 0 s
[2025-10-12 19:14:27] 2025-10-12 19:13:53,252 | INFO     | . log creation = 0 s
[2025-10-12 19:14:27] 2025-10-12 19:13:53,252 | INFO     | ..............................
[2025-10-12 19:14:27] 2025-10-12 19:13:53,354 | INFO     | 
[2025-10-12 19:14:27] 2025-10-12 19:13:53,354 | INFO     | job summary report
[2025-10-12 19:14:27] 2025-10-12 19:13:53,354 | INFO     | --------------------------------------------------
[2025-10-12 19:14:27] 2025-10-12 19:13:53,354 | INFO     | PanDA job id: 6839590723
[2025-10-12 19:14:27] 2025-10-12 19:13:53,354 | INFO     | task id: 46676269
[2025-10-12 19:14:27] 2025-10-12 19:13:53,354 | INFO     | errors: (none)
[2025-10-12 19:14:27] 2025-10-12 19:13:53,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:14:27] 2025-10-12 19:13:53,354 | INFO     | pilot state: finished 
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | transexitcode: 0
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | exeerrorcode: 0
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | exeerrordiag: 
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | exitcode: 0
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | exitmsg: OK
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | cpuconsumptiontime: 33014 s
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | nevents: 400
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | neventsw: 0
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | pid: 2695148
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | pgrp: 2695148
[2025-10-12 19:14:27] 2025-10-12 19:13:53,355 | INFO     | corecount: 12
[2025-10-12 19:14:27] 2025-10-12 19:13:53,356 | INFO     | event service: False
[2025-10-12 19:14:27] 2025-10-12 19:13:53,356 | INFO     | sizes: {0: 2348857, 7: 2349119, 11: 2349147, 3203: 2374745, 3204: 2383743, 3208: 2383799, 3215: 2384153}
[2025-10-12 19:14:27] 2025-10-12 19:13:53,356 | INFO     | --------------------------------------------------
[2025-10-12 19:14:27] 2025-10-12 19:13:53,356 | INFO     | 
[2025-10-12 19:14:27] 2025-10-12 19:13:53,356 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-12 19:14:27] 2025-10-12 19:13:53,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,385 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:14:27] 2025-10-12 19:13:53,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:14:27] 2025-10-12 19:13:53,387 | INFO     | job 6839590723 has completed (purged errors)
[2025-10-12 19:14:27] 2025-10-12 19:13:53,387 | INFO     | overall cleanup function is called
[2025-10-12 19:14:27] 2025-10-12 19:13:54,394 | INFO     | --- collectZombieJob: --- 10, [2695148]
[2025-10-12 19:14:27] 2025-10-12 19:13:54,395 | INFO     | zombie collector waiting for pid 2695148
[2025-10-12 19:14:27] 2025-10-12 19:13:54,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:14:27] 2025-10-12 19:13:54,395 | INFO     | collected zombie processes
[2025-10-12 19:14:27] 2025-10-12 19:13:54,395 | INFO     | will attempt to kill all subprocesses of pid=2695148
[2025-10-12 19:14:27] 2025-10-12 19:13:55,185 | INFO     | process IDs to be killed: [2695148] (in reverse order)
[2025-10-12 19:14:27] 2025-10-12 19:13:55,469 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:14:27] 2025-10-12 19:13:55,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:14:27] 2025-10-12 19:13:55,497 | INFO     | did not find any defunct processes belonging to 2695148
[2025-10-12 19:14:27] 2025-10-12 19:13:55,523 | INFO     | did not find any defunct processes belonging to 2695148
[2025-10-12 19:14:27] 2025-10-12 19:13:55,523 | INFO     | ready for new job
[2025-10-12 19:14:27] 2025-10-12 19:13:55,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:14:27] 2025-10-12 19:13:55,525 | INFO     | ***************************************
[2025-10-12 19:14:27] 2025-10-12 19:13:55,525 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:14:27] 2025-10-12 19:13:55,525 | INFO     | ***************************************
[2025-10-12 19:14:27] 2025-10-12 19:13:55,525 | INFO     | 
[2025-10-12 19:14:27] 2025-10-12 19:13:55,560 | INFO     | architecture information:
[2025-10-12 19:14:27] 2025-10-12 19:13:55,561 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:14:27] 2025-10-12 19:13:55,585 | INFO     | cat /etc/os-release:
[2025-10-12 19:14:27] NAME="CentOS Linux"
[2025-10-12 19:14:27] VERSION="7 (Core)"
[2025-10-12 19:14:27] ID="centos"
[2025-10-12 19:14:27] ID_LIKE="rhel fedora"
[2025-10-12 19:14:27] VERSION_ID="7"
[2025-10-12 19:14:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:14:27] ANSI_COLOR="0;31"
[2025-10-12 19:14:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:14:27] HOME_URL="https://www.centos.org/"
[2025-10-12 19:14:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:14:27] 
[2025-10-12 19:14:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:14:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:14:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:14:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:14:27] 
[2025-10-12 19:14:27] 2025-10-12 19:13:55,586 | INFO     | ***************************************
[2025-10-12 19:14:27] 2025-10-12 19:13:56,086 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-12 19:14:27] 2025-10-12 19:13:56,115 | INFO     | sufficient remaining disk space (1724188196864 B)
[2025-10-12 19:14:27] 2025-10-12 19:13:56,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:14:27] 2025-10-12 19:13:56,116 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:14:27] 2025-10-12 19:13:56,116 | INFO     | update_server=False
[2025-10-12 19:14:27] 2025-10-12 19:13:56,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:14:27] 2025-10-12 19:13:56,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:14:27] 2025-10-12 19:13:56,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:14:27] 2025-10-12 19:13:56,117 | INFO     | aborting loop
[2025-10-12 19:14:27] 2025-10-12 19:13:56,474 | INFO     | all payload control threads have been joined
[2025-10-12 19:14:27] 2025-10-12 19:13:56,516 | INFO     | all data control threads have been joined
[2025-10-12 19:14:27] 2025-10-12 19:13:56,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:14:27] 2025-10-12 19:13:57,118 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:57,122 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:57,365 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:57,379 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:57,478 | INFO     | [payload] control thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:57,488 | INFO     | [job] validate thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:57,521 | INFO     | [data] control thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:57,602 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:57,741 | INFO     | all job control threads have been joined
[2025-10-12 19:14:27] 2025-10-12 19:13:57,860 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:57,866 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:58,123 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:58,278 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:58,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:14:27] 2025-10-12 19:13:58,398 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:58,746 | INFO     | [job] control thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:13:59,367 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:14:00,758 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:14:27] 2025-10-12 19:14:04,922 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:14:27] 2025-10-12 19:14:06,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631147587392)>', '<ExcThread(monitor, started 139630687004416)>']
[2025-10-12 19:14:27] 2025-10-12 19:14:11,826 | INFO     | all workflow threads have been joined
[2025-10-12 19:14:27] 2025-10-12 19:14:11,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:14:27] 2025-10-12 19:14:11,827 | INFO     | traces error code: 0
[2025-10-12 19:14:27] 2025-10-12 19:14:11,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:14:27] 2025-10-12 19:14:27,179 | INFO     | PID=2673487 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 19:14:27] 2025-10-12 19:14:27,180 | INFO     | .. there are 17 such processes running
[2025-10-12 19:14:27] 2025-10-12 19:14:27,180 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:14:27] 2025-10-12 19:14:27,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:14:27] 2025-10-12 19:14:27,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:14:27] 2025-10-12 19:14:27,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:14:27] 2025-10-12 19:14:27,180 | INFO     | [monitor] control thread has ended
[2025-10-12 19:14:27] 2025-10-12 19:14:27,333 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:14:27] 2025-10-12 19:14:27,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:14:27] 2025-10-12 19:14:27,338 [wrapper] pilotpid: 2673487
[2025-10-12 19:14:27] 2025-10-12 19:14:27,342 [wrapper] Pilot exit status: 0
[2025-10-12 19:14:27] 2025-10-12 19:14:27,354 [wrapper] pandaids: 6839590723
[2025-10-12 19:14:27] 2025-10-12 19:14:27,532 [wrapper] cleanup supervisor_pilot 3050528 2673488
[2025-10-12 19:14:27] 2025-10-12 19:14:27,536 [wrapper] Test setup, not cleaning
[2025-10-12 19:14:27] 2025-10-12 19:14:27,539 [wrapper] apfmon messages muted
[2025-10-12 19:14:27] 2025-10-12 19:14:27,543 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:14:27] 2025-10-12 19:14:27,546 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:14:27]  *** Error codes and diagnostics ***
[2025-10-12 19:14:27]     "exeErrorCode": 0,
[2025-10-12 19:14:27]     "exeErrorDiag": "",
[2025-10-12 19:14:27]     "pilotErrorCode": 0,
[2025-10-12 19:14:27]     "pilotErrorDiag": "",
[2025-10-12 19:14:27]  *** Listing of results directory ***
[2025-10-12 19:14:27] total 417740
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:14 pilot3.tar.gz
[2025-10-12 19:14:27] -rwx------ 1 boinc boinc     36292 Oct 12 06:16 runpilot2-wrapper.sh
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:16 queuedata.json
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:14:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:19 run_atlas
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:19 job.xml
[2025-10-12 19:14:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:19 start_atlas.sh
[2025-10-12 19:14:27] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:19 shared
[2025-10-12 19:14:27] -rw-r--r-- 2 boinc boinc    569675 Oct 12 18:19 input.tar.gz
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc      9395 Oct 12 18:19 init_data.xml
[2025-10-12 19:14:27] -rw-r--r-- 2 boinc boinc 224165377 Oct 12 18:19 EVNT.46676267._004336.pool.root.1
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:19 boinc_setup_complete
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:19 boinc_lockfile
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:19 pandaJob.out
[2025-10-12 19:14:27] -rw------- 1 boinc boinc    975528 Oct 12 18:19 agis_schedconf.cvmfs.json
[2025-10-12 19:14:27] -rw------- 1 boinc boinc   1560580 Oct 12 18:19 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:14:27] drwx------ 5 boinc boinc      4096 Oct 12 18:20 pilot3
[2025-10-12 19:14:27] -rw------- 1 boinc boinc 197979658 Oct 12 19:13 HITS.46676269._072292.pool.root.1
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc       530 Oct 12 19:13 boinc_task_state.xml
[2025-10-12 19:14:27] -rw------- 1 boinc boinc      1031 Oct 12 19:13 memory_monitor_summary.json
[2025-10-12 19:14:27] -rw------- 1 boinc boinc    378970 Oct 12 19:13 log.46676269._072292.job.log.tgz.1
[2025-10-12 19:14:27] -rw------- 1 boinc boinc      7746 Oct 12 19:13 heartbeat.json
[2025-10-12 19:14:27] -rw------- 1 boinc boinc        95 Oct 12 19:13 pilot_heartbeat.json
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:14 boinc_mmap_file
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:14 wrapper_checkpoint.txt
[2025-10-12 19:14:27] -rw------- 1 boinc boinc       824 Oct 12 19:14 pilotlog.txt
[2025-10-12 19:14:27] -rw------- 1 boinc boinc    479007 Oct 12 19:14 log.46676269._072292.job.log.1
[2025-10-12 19:14:27] -rw------- 1 boinc boinc       357 Oct 12 19:14 output.list
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:14 runtime_log
[2025-10-12 19:14:27] -rw------- 1 boinc boinc    880640 Oct 12 19:14 result.tar.gz
[2025-10-12 19:14:27] -rw------- 1 boinc boinc       644 Oct 12 19:14 tJmLDm5Y4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNoiNDmLYCAqn.diag
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc      8658 Oct 12 19:14 runtime_log.err
[2025-10-12 19:14:27] -rw-r--r-- 1 boinc boinc     21912 Oct 12 19:14 stderr.txt
[2025-10-12 19:14:27] HITS file was successfully produced:
[2025-10-12 19:14:27] -rw------- 1 boinc boinc 197979658 Oct 12 19:13 shared/HITS.pool.root.1
[2025-10-12 19:14:27]  *** Contents of shared directory: ***
[2025-10-12 19:14:27] total 413696
[2025-10-12 19:14:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:19 start_atlas.sh
[2025-10-12 19:14:27] -rw-r--r-- 2 boinc boinc    569675 Oct 12 18:19 input.tar.gz
[2025-10-12 19:14:27] -rw-r--r-- 2 boinc boinc 224165377 Oct 12 18:19 ATLAS.root_0
[2025-10-12 19:14:27] -rw------- 1 boinc boinc 197979658 Oct 12 19:13 HITS.pool.root.1
[2025-10-12 19:14:27] -rw------- 1 boinc boinc    880640 Oct 12 19:14 result.tar.gz
19:14:28 (2666174): run_atlas exited; CPU time 33197.758242
19:14:28 (2666174): called boinc_finish(0)

</stderr_txt>
]]>

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