Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
18:38:57 (2837690): wrapper (7.7.26015): starting
18:38:57 (2837690): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 18:38:57] Arguments: --nthreads 12
[2025-10-12 18:38:57] Threads: 12
[2025-10-12 18:38:57] Checking for CVMFS
[2025-10-12 18:38:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:38:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:38:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:38:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:38:57] 2.11.0.0 3299214 3432 86340 151631 1 188 5421697 6144000 14416 130560 0 67383236 100.000 124598 191 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 18:38:57] CVMFS is ok
[2025-10-12 18:38:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:38:57] Checking for apptainer binary...
[2025-10-12 18:38:57] apptainer is not installed, using version from CVMFS
[2025-10-12 18:38:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:38:57] radiat0r
[2025-10-12 18:38:57] apptainer works
[2025-10-12 18:38:58] Set ATHENA_PROC_NUMBER=12
[2025-10-12 18:38:58] Set ATHENA_CORE_NUMBER=12
[2025-10-12 18:38:58] Starting ATLAS job with PandaID=6839987909
[2025-10-12 18:38:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:27:41]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:27:41]  status=None
[2025-10-12 19:27:41]  status_code=0
[2025-10-12 19:27:41]  storage_token=
[2025-10-12 19:27:41]  surl=/var/lib/boinc/slots/8/PanDA_Pilot-6839987909/log.46676269._078253.job.log.tgz.1
[2025-10-12 19:27:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/87/log.46676269._078253.job.log.tgz.1
[2025-10-12 19:27:41]  workdir=None
[2025-10-12 19:27:41] ]
[2025-10-12 19:27:41] 2025-10-12 19:27:00,435 | INFO     | transferring file log.46676269._078253.job.log.tgz.1 from /var/lib/boinc/slots/8/PanDA_Pilot-6839987909/log.46676269._078253.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 19:27:41] 2025-10-12 19:27:00,436 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/8/PanDA_Pilot-6839987909/log.46676269._078253.job.log.tgz.1 /var/lib/boinc/slots/8/log.46676269._078253.job
[2025-10-12 19:27:41] 2025-10-12 19:27:00,455 | INFO     | adding to output.list: log.46676269._078253.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/87/log.46676269._078253.job.log.tg
[2025-10-12 19:27:41] 2025-10-12 19:27:00,456 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 19:27:41] 2025-10-12 19:27:00,456 | INFO     | summary of transferred files:
[2025-10-12 19:27:41] 2025-10-12 19:27:00,456 | INFO     |  -- lfn=log.46676269._078253.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 19:27:41] 2025-10-12 19:27:00,456 | INFO     | stage-out finished correctly
[2025-10-12 19:27:41] 2025-10-12 19:27:00,923 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 19:27:41] 2025-10-12 19:27:01,017 | INFO     | job 6839987909 has state=finished
[2025-10-12 19:27:41] 2025-10-12 19:27:01,017 | INFO     | preparing for final server update for job 6839987909 in state='finished'
[2025-10-12 19:27:41] 2025-10-12 19:27:01,017 | INFO     | this job has now completed (state=finished)
[2025-10-12 19:27:41] 2025-10-12 19:27:01,017 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 19:27:41] 2025-10-12 19:27:01,017 | INFO     | log transfer has been attempted: DONE
[2025-10-12 19:27:41] 2025-10-12 19:27:01,018 | INFO     | job 6839987909 has finished - writing final server update
[2025-10-12 19:27:41] 2025-10-12 19:27:01,018 | INFO     | total number of processed events: 400 (read)
[2025-10-12 19:27:41] 2025-10-12 19:27:01,019 | INFO     | executing command: lscpu
[2025-10-12 19:27:41] 2025-10-12 19:27:01,197 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 19:27:41] 2025-10-12 19:27:01,254 | INFO     | monitor loop #202: job 0:6839987909 is in state 'finished'
[2025-10-12 19:27:41] 2025-10-12 19:27:01,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:27:41] 2025-10-12 19:27:02,283 | INFO     | time since job start (2872s) is within the limit (172800.0s)
[2025-10-12 19:27:41] 2025-10-12 19:27:03,758 | INFO     | monitor loop #203: job 0:6839987909 is in state 'finished'
[2025-10-12 19:27:41] 2025-10-12 19:27:03,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:27:41] 2025-10-12 19:27:04,243 | INFO     | PID=2842445 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 19:27:41] 2025-10-12 19:27:04,243 | INFO     | .. there are 17 such processes running
[2025-10-12 19:27:41] 2025-10-12 19:27:05,244 | INFO     | time since job start (2875s) is within the limit (172800.0s)
[2025-10-12 19:27:41] 2025-10-12 19:27:06,261 | INFO     | monitor loop #204: job 0:6839987909 is in state 'finished'
[2025-10-12 19:27:41] 2025-10-12 19:27:06,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:27:41] 2025-10-12 19:27:07,247 | INFO     | time since job start (2877s) is within the limit (172800.0s)
[2025-10-12 19:27:41] 2025-10-12 19:27:07,687 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 19:27:41] 2025-10-12 19:27:07,750 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2356.7796249999988
[2025-10-12 19:27:41] 2025-10-12 19:27:07,839 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6839987909/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:27:41] 2025-10-12 19:27:07,840 | INFO     | extracted standard info from prmon json
[2025-10-12 19:27:41] 2025-10-12 19:27:07,840 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:27:41] 2025-10-12 19:27:07,840 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:27:41] 2025-10-12 19:27:07,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:27:41] 2025-10-12 19:27:07,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:27:41] 2025-10-12 19:27:07,841 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:27:41] 2025-10-12 19:27:07,842 | INFO     | sum of square deviations: 19832930.0
[2025-10-12 19:27:41] 2025-10-12 19:27:07,842 | INFO     | sum of deviations: 217007805.0
[2025-10-12 19:27:41] 2025-10-12 19:27:07,842 | INFO     | mean x: 1760295878.5
[2025-10-12 19:27:41] 2025-10-12 19:27:07,842 | INFO     | mean y: 2653929.75
[2025-10-12 19:27:41] 2025-10-12 19:27:07,842 | INFO     | -- intersect: -19258138335.63044
[2025-10-12 19:27:41] 2025-10-12 19:27:07,842 | INFO     | intersect: -19258138335.63044
[2025-10-12 19:27:41] 2025-10-12 19:27:07,842 | INFO     | chi2: 0.0004621307554275243
[2025-10-12 19:27:41] 2025-10-12 19:27:07,843 | INFO     | -- intersect: -19258138335.63044
[2025-10-12 19:27:41] 2025-10-12 19:27:07,843 | INFO     | current memory leak: 10.94 B/s (using 40 data points, chi2=0.00)
[2025-10-12 19:27:41] 2025-10-12 19:27:07,843 | INFO     | could have reported an average CPU frequency of 2343 MHz (5 samples)
[2025-10-12 19:27:41] 2025-10-12 19:27:07,843 | INFO     | ..............................
[2025-10-12 19:27:41] 2025-10-12 19:27:07,843 | INFO     | . Timing measurements:
[2025-10-12 19:27:41] 2025-10-12 19:27:07,843 | INFO     | . get job = 0 s
[2025-10-12 19:27:41] 2025-10-12 19:27:07,843 | INFO     | . initial setup = 1 s
[2025-10-12 19:27:41] 2025-10-12 19:27:07,843 | INFO     | . payload setup = 8 s
[2025-10-12 19:27:41] 2025-10-12 19:27:07,844 | INFO     | . stage-in = 0 s
[2025-10-12 19:27:41] 2025-10-12 19:27:07,844 | INFO     | . payload execution = 2838 s
[2025-10-12 19:27:41] 2025-10-12 19:27:07,844 | INFO     | . stage-out = 0 s
[2025-10-12 19:27:41] 2025-10-12 19:27:07,844 | INFO     | . log creation = 0 s
[2025-10-12 19:27:41] 2025-10-12 19:27:07,844 | INFO     | ..............................
[2025-10-12 19:27:41] 2025-10-12 19:27:07,937 | INFO     | 
[2025-10-12 19:27:41] 2025-10-12 19:27:07,937 | INFO     | job summary report
[2025-10-12 19:27:41] 2025-10-12 19:27:07,937 | INFO     | --------------------------------------------------
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | PanDA job id: 6839987909
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | task id: 46676269
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | errors: (none)
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | pilot state: finished 
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | transexitcode: 0
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | exeerrorcode: 0
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | exeerrordiag: 
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | exitcode: 0
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | exitmsg: OK
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | cpuconsumptiontime: 30730 s
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | nevents: 400
[2025-10-12 19:27:41] 2025-10-12 19:27:07,938 | INFO     | neventsw: 0
[2025-10-12 19:27:41] 2025-10-12 19:27:07,939 | INFO     | pid: 2850619
[2025-10-12 19:27:41] 2025-10-12 19:27:07,939 | INFO     | pgrp: 2850619
[2025-10-12 19:27:41] 2025-10-12 19:27:07,939 | INFO     | corecount: 12
[2025-10-12 19:27:41] 2025-10-12 19:27:07,939 | INFO     | event service: False
[2025-10-12 19:27:41] 2025-10-12 19:27:07,939 | INFO     | sizes: {0: 2348686, 1: 2348885, 8: 2349147, 11: 2349175, 2851: 2374537, 2852: 2383719, 2859: 2383889}
[2025-10-12 19:27:41] 2025-10-12 19:27:07,939 | INFO     | --------------------------------------------------
[2025-10-12 19:27:41] 2025-10-12 19:27:07,939 | INFO     | 
[2025-10-12 19:27:41] 2025-10-12 19:27:07,939 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-12 19:27:41] 2025-10-12 19:27:07,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,975 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:27:41] 2025-10-12 19:27:07,976 | INFO     | job 6839987909 has completed (purged errors)
[2025-10-12 19:27:41] 2025-10-12 19:27:07,976 | INFO     | overall cleanup function is called
[2025-10-12 19:27:41] 2025-10-12 19:27:08,984 | INFO     | --- collectZombieJob: --- 10, [2850619]
[2025-10-12 19:27:41] 2025-10-12 19:27:08,984 | INFO     | zombie collector waiting for pid 2850619
[2025-10-12 19:27:41] 2025-10-12 19:27:08,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:27:41] 2025-10-12 19:27:08,984 | INFO     | collected zombie processes
[2025-10-12 19:27:41] 2025-10-12 19:27:08,984 | INFO     | will attempt to kill all subprocesses of pid=2850619
[2025-10-12 19:27:41] 2025-10-12 19:27:09,762 | INFO     | process IDs to be killed: [2850619] (in reverse order)
[2025-10-12 19:27:41] 2025-10-12 19:27:10,031 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:27:41] 2025-10-12 19:27:10,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:27:41] 2025-10-12 19:27:10,058 | INFO     | did not find any defunct processes belonging to 2850619
[2025-10-12 19:27:41] 2025-10-12 19:27:10,083 | INFO     | did not find any defunct processes belonging to 2850619
[2025-10-12 19:27:41] 2025-10-12 19:27:10,083 | INFO     | ready for new job
[2025-10-12 19:27:41] 2025-10-12 19:27:10,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:27:41] 2025-10-12 19:27:10,086 | INFO     | ***************************************
[2025-10-12 19:27:41] 2025-10-12 19:27:10,086 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:27:41] 2025-10-12 19:27:10,086 | INFO     | ***************************************
[2025-10-12 19:27:41] 2025-10-12 19:27:10,086 | INFO     | 
[2025-10-12 19:27:41] 2025-10-12 19:27:10,129 | INFO     | architecture information:
[2025-10-12 19:27:41] 2025-10-12 19:27:10,129 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:27:41] 2025-10-12 19:27:10,152 | INFO     | cat /etc/os-release:
[2025-10-12 19:27:41] NAME="CentOS Linux"
[2025-10-12 19:27:41] VERSION="7 (Core)"
[2025-10-12 19:27:41] ID="centos"
[2025-10-12 19:27:41] ID_LIKE="rhel fedora"
[2025-10-12 19:27:41] VERSION_ID="7"
[2025-10-12 19:27:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:27:41] ANSI_COLOR="0;31"
[2025-10-12 19:27:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:27:41] HOME_URL="https://www.centos.org/"
[2025-10-12 19:27:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:27:41] 
[2025-10-12 19:27:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:27:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:27:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:27:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:27:41] 
[2025-10-12 19:27:41] 2025-10-12 19:27:10,152 | INFO     | ***************************************
[2025-10-12 19:27:41] 2025-10-12 19:27:10,655 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-12 19:27:41] 2025-10-12 19:27:10,684 | INFO     | sufficient remaining disk space (1723927101440 B)
[2025-10-12 19:27:41] 2025-10-12 19:27:10,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:27:41] 2025-10-12 19:27:10,685 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:27:41] 2025-10-12 19:27:10,685 | INFO     | update_server=False
[2025-10-12 19:27:41] 2025-10-12 19:27:10,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:27:41] 2025-10-12 19:27:10,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:27:41] 2025-10-12 19:27:10,686 | INFO     | aborting loop
[2025-10-12 19:27:41] 2025-10-12 19:27:11,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:27:41] 2025-10-12 19:27:11,244 | INFO     | all payload control threads have been joined
[2025-10-12 19:27:41] 2025-10-12 19:27:11,314 | INFO     | all data control threads have been joined
[2025-10-12 19:27:41] 2025-10-12 19:27:11,422 | INFO     | all job control threads have been joined
[2025-10-12 19:27:41] 2025-10-12 19:27:11,526 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:27:41] 2025-10-12 19:27:11,687 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:11,690 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:11,711 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:11,970 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:12,010 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:12,203 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:12,248 | INFO     | [payload] control thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:12,319 | INFO     | [data] control thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:12,426 | INFO     | [job] control thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:12,510 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:12,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:27:41] 2025-10-12 19:27:12,958 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:13,070 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:13,161 | INFO     | [job] validate thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:13,950 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:14,676 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:27:41] 2025-10-12 19:27:15,530 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:21,571 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:27:41] 2025-10-12 19:27:22,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:27:41] 2025-10-12 19:27:24,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306347882304)>', '<ExcThread(monitor, started 140306128725760)>']
[2025-10-12 19:27:41] 2025-10-12 19:27:29,498 | INFO     | all workflow threads have been joined
[2025-10-12 19:27:41] 2025-10-12 19:27:29,499 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:27:41] 2025-10-12 19:27:29,499 | INFO     | traces error code: 0
[2025-10-12 19:27:41] 2025-10-12 19:27:29,499 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:27:41] 2025-10-12 19:27:41,280 | INFO     | PID=2842445 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:27:41] 2025-10-12 19:27:41,281 | INFO     | .. there are 17 such processes running
[2025-10-12 19:27:41] 2025-10-12 19:27:41,281 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:27:41] 2025-10-12 19:27:41,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:27:41] 2025-10-12 19:27:41,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:27:41] 2025-10-12 19:27:41,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:27:41] 2025-10-12 19:27:41,281 | INFO     | [monitor] control thread has ended
[2025-10-12 19:27:41] 2025-10-12 19:27:41,431 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:27:41] 2025-10-12 19:27:41,435 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:27:41] 2025-10-12 19:27:41,438 [wrapper] pilotpid: 2842445
[2025-10-12 19:27:41] 2025-10-12 19:27:41,442 [wrapper] Pilot exit status: 0
[2025-10-12 19:27:41] 2025-10-12 19:27:41,454 [wrapper] pandaids: 6839987909
[2025-10-12 19:27:41] 2025-10-12 19:27:41,623 [wrapper] cleanup supervisor_pilot 3185092 2842446
[2025-10-12 19:27:41] 2025-10-12 19:27:41,628 [wrapper] Test setup, not cleaning
[2025-10-12 19:27:41] 2025-10-12 19:27:41,632 [wrapper] apfmon messages muted
[2025-10-12 19:27:41] 2025-10-12 19:27:41,635 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:27:41] 2025-10-12 19:27:41,638 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:27:41]  *** Error codes and diagnostics ***
[2025-10-12 19:27:41]     "exeErrorCode": 0,
[2025-10-12 19:27:41]     "exeErrorDiag": "",
[2025-10-12 19:27:41]     "pilotErrorCode": 0,
[2025-10-12 19:27:41]     "pilotErrorDiag": "",
[2025-10-12 19:27:41]  *** Listing of results directory ***
[2025-10-12 19:27:41] total 406800
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:35 pilot3.tar.gz
[2025-10-12 19:27:41] -rwx------ 1 boinc boinc     36292 Oct 12 12:38 runpilot2-wrapper.sh
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc      5112 Oct 12 12:38 queuedata.json
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:27:41] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:38 run_atlas
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:38 job.xml
[2025-10-12 19:27:41] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:38 shared
[2025-10-12 19:27:41] -rw-r--r-- 2 boinc boinc    569676 Oct 12 18:38 input.tar.gz
[2025-10-12 19:27:41] -rw-r--r-- 2 boinc boinc 221034256 Oct 12 18:38 EVNT.46676267._003791.pool.root.1
[2025-10-12 19:27:41] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:38 start_atlas.sh
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc      9395 Oct 12 18:38 init_data.xml
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:38 boinc_setup_complete
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:38 boinc_lockfile
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:38 pandaJob.out
[2025-10-12 19:27:41] -rw------- 1 boinc boinc    975528 Oct 12 18:39 agis_schedconf.cvmfs.json
[2025-10-12 19:27:41] -rw------- 1 boinc boinc   1560580 Oct 12 18:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:27:41] drwx------ 5 boinc boinc      4096 Oct 12 18:39 pilot3
[2025-10-12 19:27:41] -rw------- 1 boinc boinc 190007833 Oct 12 19:26 HITS.46676269._078253.pool.root.1
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc       530 Oct 12 19:26 boinc_task_state.xml
[2025-10-12 19:27:41] -rw------- 1 boinc boinc        95 Oct 12 19:26 pilot_heartbeat.json
[2025-10-12 19:27:41] -rw------- 1 boinc boinc      1028 Oct 12 19:26 memory_monitor_summary.json
[2025-10-12 19:27:41] -rw------- 1 boinc boinc    374042 Oct 12 19:27 log.46676269._078253.job.log.tgz.1
[2025-10-12 19:27:41] -rw------- 1 boinc boinc      7745 Oct 12 19:27 heartbeat.json
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:27 boinc_mmap_file
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:27 wrapper_checkpoint.txt
[2025-10-12 19:27:41] -rw------- 1 boinc boinc       823 Oct 12 19:27 pilotlog.txt
[2025-10-12 19:27:41] -rw------- 1 boinc boinc    431921 Oct 12 19:27 log.46676269._078253.job.log.1
[2025-10-12 19:27:41] -rw------- 1 boinc boinc       357 Oct 12 19:27 output.list
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:27 runtime_log
[2025-10-12 19:27:41] -rw------- 1 boinc boinc    829440 Oct 12 19:27 result.tar.gz
[2025-10-12 19:27:41] -rw------- 1 boinc boinc       644 Oct 12 19:27 Tr4MDm8VAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbtTMDm0eJV6n.diag
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc      8658 Oct 12 19:27 runtime_log.err
[2025-10-12 19:27:41] -rw-r--r-- 1 boinc boinc     21764 Oct 12 19:27 stderr.txt
[2025-10-12 19:27:41] HITS file was successfully produced:
[2025-10-12 19:27:41] -rw------- 1 boinc boinc 190007833 Oct 12 19:26 shared/HITS.pool.root.1
[2025-10-12 19:27:41]  *** Contents of shared directory: ***
[2025-10-12 19:27:41] total 402804
[2025-10-12 19:27:41] -rw-r--r-- 2 boinc boinc    569676 Oct 12 18:38 input.tar.gz
[2025-10-12 19:27:41] -rw-r--r-- 2 boinc boinc 221034256 Oct 12 18:38 ATLAS.root_0
[2025-10-12 19:27:41] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:38 start_atlas.sh
[2025-10-12 19:27:41] -rw------- 1 boinc boinc 190007833 Oct 12 19:26 HITS.pool.root.1
[2025-10-12 19:27:41] -rw------- 1 boinc boinc    829440 Oct 12 19:27 result.tar.gz
19:27:43 (2837690): run_atlas exited; CPU time 30900.744139
19:27:43 (2837690): called boinc_finish(0)

</stderr_txt>
]]>

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