Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:36:16 (855666): wrapper (7.7.26015): starting
13:36:16 (855666): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:36:16] Arguments: --nthreads 8
[2025-10-12 13:36:16] Threads: 8
[2025-10-12 13:36:16] Checking for CVMFS
[2025-10-12 13:36:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:36:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:36:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:36:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:36:17] 2.13.2.0 6309 5987 149808 151629 2 196 26917168 40960000 24290 16776704 0 16141690 99.715 10505251 29332 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:36:17] CVMFS is ok
[2025-10-12 13:36:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:36:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:36:17] Further information can be found at the LHC@home message board.
[2025-10-12 13:36:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:36:17] Checking for apptainer binary...
[2025-10-12 13:36:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:36:18] Running /usr/bin/apptainer --version
[2025-10-12 13:36:18] apptainer version 1.4.3-1.el9
[2025-10-12 13:36:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:36:19] c-211-35-3.aglt2.org
[2025-10-12 13:36:19] apptainer works
[2025-10-12 13:36:19] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:36:19] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:36:19] Starting ATLAS job with PandaID=6840389975
[2025-10-12 13:36:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:13:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:13:38] 2025-10-12 22:12:26,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:13:38] 2025-10-12 22:12:26,328 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:13:38] 2025-10-12 22:12:26,329 | INFO     | sum of square deviations: 6035955330.83272
[2025-10-12 18:13:38] 2025-10-12 22:12:26,331 | INFO     | sum of deviations: 107142236438.51675
[2025-10-12 18:13:38] 2025-10-12 22:12:26,331 | INFO     | mean x: 1760298917.5947955
[2025-10-12 18:13:38] 2025-10-12 22:12:26,331 | INFO     | mean y: 2431527.9405204463
[2025-10-12 18:13:38] 2025-10-12 22:12:26,331 | INFO     | -- intersect: -31244049351.06677
[2025-10-12 18:13:38] 2025-10-12 22:12:26,331 | INFO     | intersect: -31244049351.06677
[2025-10-12 18:13:38] 2025-10-12 22:12:26,332 | INFO     | chi2: 5.358335299130465
[2025-10-12 18:13:38] 2025-10-12 22:12:26,346 | INFO     | sum of square deviations: 5705588599.818204
[2025-10-12 18:13:38] 2025-10-12 22:12:26,348 | INFO     | sum of deviations: 139018211369.8182
[2025-10-12 18:13:38] 2025-10-12 22:12:26,348 | INFO     | mean x: 1760298765.090909
[2025-10-12 18:13:38] 2025-10-12 22:12:26,348 | INFO     | mean y: 2446064.5492424243
[2025-10-12 18:13:38] 2025-10-12 22:12:26,349 | INFO     | -- intersect: -42887710054.87991
[2025-10-12 18:13:38] 2025-10-12 22:12:26,349 | INFO     | intersect: -42887710054.87991
[2025-10-12 18:13:38] 2025-10-12 22:12:26,349 | INFO     | chi2: 3.9314023277538377
[2025-10-12 18:13:38] 2025-10-12 22:12:26,349 | INFO     | current chi2=3.9314023277538377 (change=26.630154548338652 %)
[2025-10-12 18:13:38] 2025-10-12 22:12:26,349 | INFO     | sum of square deviations: 5387500558.795381
[2025-10-12 18:13:38] 2025-10-12 22:12:26,369 | INFO     | sum of deviations: 135966033695.08888
[2025-10-12 18:13:38] 2025-10-12 22:12:26,370 | INFO     | mean x: 1760298612.5868726
[2025-10-12 18:13:38] 2025-10-12 22:12:26,370 | INFO     | mean y: 2444601.0849420847
[2025-10-12 18:13:38] 2025-10-12 22:12:26,370 | INFO     | -- intersect: -44422761087.6028
[2025-10-12 18:13:38] 2025-10-12 22:12:26,370 | INFO     | intersect: -44422761087.6028
[2025-10-12 18:13:38] 2025-10-12 22:12:26,370 | INFO     | chi2: 3.931057890082846
[2025-10-12 18:13:38] 2025-10-12 22:12:26,371 | INFO     | current chi2=3.931057890082846 (change=0.008761191103744435 %)
[2025-10-12 18:13:38] 2025-10-12 22:12:26,371 | INFO     | right removable region: 258
[2025-10-12 18:13:38] 2025-10-12 22:12:26,371 | INFO     | sum of square deviations: 5705556149.030335
[2025-10-12 18:13:38] 2025-10-12 22:12:26,395 | INFO     | sum of deviations: 27915813367.742455
[2025-10-12 18:13:38] 2025-10-12 22:12:26,395 | INFO     | mean x: 1760299070.1060605
[2025-10-12 18:13:38] 2025-10-12 22:12:26,395 | INFO     | mean y: 2468023.2234848486
[2025-10-12 18:13:38] 2025-10-12 22:12:26,396 | INFO     | -- intersect: -8610220911.726843
[2025-10-12 18:13:38] 2025-10-12 22:12:26,396 | INFO     | intersect: -8610220911.726843
[2025-10-12 18:13:38] 2025-10-12 22:12:26,396 | INFO     | chi2: 1.9863385468280952
[2025-10-12 18:13:38] 2025-10-12 22:12:26,396 | INFO     | current chi2=1.9863385468280952 (change=62.92993185494695 %)
[2025-10-12 18:13:38] 2025-10-12 22:12:26,396 | INFO     | sum of square deviations: 5387484579.830109
[2025-10-12 18:13:38] 2025-10-12 22:12:26,427 | INFO     | sum of deviations: 1422494795.0308762
[2025-10-12 18:13:38] 2025-10-12 22:12:26,428 | INFO     | mean x: 1760299222.6061776
[2025-10-12 18:13:38] 2025-10-12 22:12:26,428 | INFO     | mean y: 2480692.980694981
[2025-10-12 18:13:38] 2025-10-12 22:12:26,428 | INFO     | -- intersect: -462303278.9732717
[2025-10-12 18:13:38] 2025-10-12 22:12:26,428 | INFO     | intersect: -462303278.9732717
[2025-10-12 18:13:38] 2025-10-12 22:12:26,428 | INFO     | chi2: 1.6358751367673812
[2025-10-12 18:13:38] 2025-10-12 22:12:26,428 | INFO     | current chi2=1.6358751367673812 (change=17.643689723504338 %)
[2025-10-12 18:13:38] 2025-10-12 22:12:26,428 | INFO     | left removable region: 20
[2025-10-12 18:13:38] 2025-10-12 22:12:26,429 | INFO     | sum of square deviations: 4180375975.5798163
[2025-10-12 18:13:38] 2025-10-12 22:12:26,430 | INFO     | sum of deviations: 10731195061.630255
[2025-10-12 18:13:38] 2025-10-12 22:12:26,431 | INFO     | mean x: 1760299192.1008403
[2025-10-12 18:13:38] 2025-10-12 22:12:26,431 | INFO     | mean y: 2508354.848739496
[2025-10-12 18:13:38] 2025-10-12 22:12:26,431 | INFO     | -- intersect: -4516251227.450366
[2025-10-12 18:13:38] 2025-10-12 22:12:26,431 | INFO     | intersect: -4516251227.450366
[2025-10-12 18:13:38] 2025-10-12 22:12:26,447 | INFO     | chi2: 0.0018328963230149083
[2025-10-12 18:13:38] 2025-10-12 22:12:26,448 | INFO     | -- intersect: -4516251227.450366
[2025-10-12 18:13:38] 2025-10-12 22:12:26,448 | INFO     | current memory leak: 2.57 B/s (using 238 data points, chi2=0.00)
[2025-10-12 18:13:38] 2025-10-12 22:12:26,448 | INFO     | could have reported an average CPU frequency of 2549 MHz (12 samples)
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | ..............................
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | . Timing measurements:
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | . get job = 0 s
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | . initial setup = 3 s
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | . payload setup = 45 s
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | . stage-in = 0 s
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | . payload execution = 16385 s
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | . stage-out = 5 s
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | . log creation = 1 s
[2025-10-12 18:13:38] 2025-10-12 22:12:26,449 | INFO     | ..............................
[2025-10-12 18:13:38] 2025-10-12 22:12:27,007 | INFO     | 
[2025-10-12 18:13:38] 2025-10-12 22:12:27,007 | INFO     | job summary report
[2025-10-12 18:13:38] 2025-10-12 22:12:27,007 | INFO     | --------------------------------------------------
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | PanDA job id: 6840389975
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | task id: 46676269
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | errors: (none)
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | pilot state: finished 
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | transexitcode: 0
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | exeerrorcode: 0
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | exeerrordiag: 
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | exitcode: 0
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | exitmsg: OK
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | cpuconsumptiontime: 46436 s
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | nevents: 400
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | neventsw: 0
[2025-10-12 18:13:38] 2025-10-12 22:12:27,008 | INFO     | pid: 871319
[2025-10-12 18:13:38] 2025-10-12 22:12:27,009 | INFO     | pgrp: 871319
[2025-10-12 18:13:38] 2025-10-12 22:12:27,009 | INFO     | corecount: 8
[2025-10-12 18:13:38] 2025-10-12 22:12:27,009 | INFO     | event service: False
[2025-10-12 18:13:38] 2025-10-12 22:12:27,009 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348691, 3: 2348862, 14: 2348890, 24: 2349180, 25: 2349336, 16434: 2380713, 16440: 2389711, 16444: 2389767, 16483: 2389961}
[2025-10-12 18:13:38] 2025-10-12 22:12:27,009 | INFO     | --------------------------------------------------
[2025-10-12 18:13:38] 2025-10-12 22:12:27,009 | INFO     | 
[2025-10-12 18:13:38] 2025-10-12 22:12:27,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 18:13:38] 2025-10-12 22:12:27,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,178 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:13:38] 2025-10-12 22:12:27,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,180 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:13:38] 2025-10-12 22:12:27,180 | INFO     | job 6840389975 has completed (purged errors)
[2025-10-12 18:13:38] 2025-10-12 22:12:27,180 | INFO     | overall cleanup function is called
[2025-10-12 18:13:38] 2025-10-12 22:12:28,230 | INFO     | --- collectZombieJob: --- 10, [871319]
[2025-10-12 18:13:38] 2025-10-12 22:12:28,231 | INFO     | zombie collector waiting for pid 871319
[2025-10-12 18:13:38] 2025-10-12 22:12:28,231 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:13:38] 2025-10-12 22:12:28,231 | INFO     | collected zombie processes
[2025-10-12 18:13:38] 2025-10-12 22:12:28,231 | INFO     | will attempt to kill all subprocesses of pid=871319
[2025-10-12 18:13:38] 2025-10-12 22:12:29,816 | INFO     | process IDs to be killed: [871319] (in reverse order)
[2025-10-12 18:13:38] 2025-10-12 22:12:30,442 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:13:38] 2025-10-12 22:12:30,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:13:38] 2025-10-12 22:12:30,519 | INFO     | did not find any defunct processes belonging to 871319
[2025-10-12 18:13:38] 2025-10-12 22:12:30,609 | INFO     | did not find any defunct processes belonging to 871319
[2025-10-12 18:13:38] 2025-10-12 22:12:30,609 | INFO     | ready for new job
[2025-10-12 18:13:38] 2025-10-12 22:12:30,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:13:38] 2025-10-12 22:12:30,634 | INFO     | ***************************************
[2025-10-12 18:13:38] 2025-10-12 22:12:30,635 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:13:38] 2025-10-12 22:12:30,635 | INFO     | ***************************************
[2025-10-12 18:13:38] 2025-10-12 22:12:30,635 | INFO     | 
[2025-10-12 18:13:38] 2025-10-12 22:12:30,681 | INFO     | architecture information:
[2025-10-12 18:13:38] 2025-10-12 22:12:30,686 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:13:38] 2025-10-12 22:12:30,731 | INFO     | cat /etc/os-release:
[2025-10-12 18:13:38] NAME="CentOS Linux"
[2025-10-12 18:13:38] VERSION="7 (Core)"
[2025-10-12 18:13:38] ID="centos"
[2025-10-12 18:13:38] ID_LIKE="rhel fedora"
[2025-10-12 18:13:38] VERSION_ID="7"
[2025-10-12 18:13:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:13:38] ANSI_COLOR="0;31"
[2025-10-12 18:13:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:13:38] HOME_URL="https://www.centos.org/"
[2025-10-12 18:13:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:13:38] 
[2025-10-12 18:13:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:13:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:13:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:13:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:13:38] 
[2025-10-12 18:13:38] 2025-10-12 22:12:30,732 | INFO     | ***************************************
[2025-10-12 18:13:38] 2025-10-12 22:12:31,235 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 18:13:38] 2025-10-12 22:12:31,325 | INFO     | sufficient remaining disk space (127477481472 B)
[2025-10-12 18:13:38] 2025-10-12 22:12:31,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:13:38] 2025-10-12 22:12:31,326 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:13:38] 2025-10-12 22:12:31,326 | INFO     | update_server=False
[2025-10-12 18:13:38] 2025-10-12 22:12:31,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:13:38] 2025-10-12 22:12:31,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:13:38] 2025-10-12 22:12:31,400 | INFO     | all data control threads have been joined
[2025-10-12 18:13:38] 2025-10-12 22:12:31,794 | INFO     | all payload control threads have been joined
[2025-10-12 18:13:38] 2025-10-12 22:12:31,808 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 18:13:38] 2025-10-12 22:12:31,808 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 18:13:38] 2025-10-12 22:12:31,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:13:38] 2025-10-12 22:12:31,809 | INFO     | will abort loop
[2025-10-12 18:13:38] 2025-10-12 22:12:31,907 | INFO     | all job control threads have been joined
[2025-10-12 18:13:38] 2025-10-12 22:12:32,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:13:38] 2025-10-12 22:12:32,332 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:32,375 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:32,410 | INFO     | [data] control thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:32,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:13:38] 2025-10-12 22:12:32,800 | INFO     | [payload] control thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:32,815 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:32,899 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:32,912 | INFO     | [job] control thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:33,029 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:33,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:33,328 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:33,421 | INFO     | [job] validate thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:33,422 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:33,423 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:33,503 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:34,758 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:12:35,339 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:13:38] 2025-10-12 22:13:00,301 | INFO     | PID=862361 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 18:13:38] 2025-10-12 22:13:00,301 | INFO     | .. there are 24 such processes running
[2025-10-12 18:13:38] 2025-10-12 22:13:00,301 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:13:38] 2025-10-12 22:13:00,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:13:38] 2025-10-12 22:13:00,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:13:38] 2025-10-12 22:13:31,045 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:13:38] 2025-10-12 22:13:31,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874182022976)>', '<ExcThread(monitor, started 139873839204096)>']
[2025-10-12 18:13:38] 2025-10-12 22:13:32,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:13:38] 2025-10-12 22:13:32,598 | INFO     | [monitor] control thread has ended
[2025-10-12 18:13:38] 2025-10-12 22:13:36,740 | INFO     | all workflow threads have been joined
[2025-10-12 18:13:38] 2025-10-12 22:13:36,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:13:38] 2025-10-12 22:13:36,741 | INFO     | traces error code: 0
[2025-10-12 18:13:38] 2025-10-12 22:13:36,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:13:38] 2025-10-12 22:13:37,283 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:13:38] 2025-10-12 22:13:37,287 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:13:38] 2025-10-12 22:13:37,291 [wrapper] pilotpid: 862361
[2025-10-12 18:13:38] 2025-10-12 22:13:37,294 [wrapper] Pilot exit status: 0
[2025-10-12 18:13:38] 2025-10-12 22:13:37,311 [wrapper] pandaids: 6840389975
[2025-10-12 18:13:38] 2025-10-12 22:13:37,410 [wrapper] cleanup supervisor_pilot 1438814 862362
[2025-10-12 18:13:38] 2025-10-12 22:13:37,431 [wrapper] Test setup, not cleaning
[2025-10-12 18:13:38] 2025-10-12 22:13:37,450 [wrapper] apfmon messages muted
[2025-10-12 18:13:38] 2025-10-12 22:13:37,471 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:13:38] 2025-10-12 22:13:37,488 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:13:38]  *** Error codes and diagnostics ***
[2025-10-12 18:13:38]     "exeErrorCode": 0,
[2025-10-12 18:13:38]     "exeErrorDiag": "",
[2025-10-12 18:13:38]     "pilotErrorCode": 0,
[2025-10-12 18:13:38]     "pilotErrorDiag": "",
[2025-10-12 18:13:38]  *** Listing of results directory ***
[2025-10-12 18:13:38] total 415548
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 18:13:38] -rwx------. 1 boincer umatlas     36292 Oct 12 12:08 runpilot2-wrapper.sh
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:08 queuedata.json
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:13:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:36 run_atlas
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:36 job.xml
[2025-10-12 18:13:38] -rw-r--r--. 2 boincer umatlas 222854567 Oct 12 13:36 EVNT.46676267._001809.pool.root.1
[2025-10-12 18:13:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:36 shared
[2025-10-12 18:13:38] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 13:36 input.tar.gz
[2025-10-12 18:13:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:36 start_atlas.sh
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:36 boinc_lockfile
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 13:36 pandaJob.out
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas    975528 Oct 12 13:36 agis_schedconf.cvmfs.json
[2025-10-12 18:13:38] drwx------. 5 boincer umatlas      4096 Oct 12 13:37 pilot3
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas 193621027 Oct 12 18:09 HITS.46676269._083101.pool.root.1
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas      6857 Oct 12 18:09 init_data.xml
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas       531 Oct 12 18:09 boinc_task_state.xml
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas      1046 Oct 12 18:11 memory_monitor_summary.json
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas    492459 Oct 12 18:11 log.46676269._083101.job.log.tgz.1
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas        95 Oct 12 18:12 pilot_heartbeat.json
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas      7838 Oct 12 18:12 heartbeat.json
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas      5010 Oct 12 18:13 pilotlog.txt
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas        28 Oct 12 18:13 wrapper_checkpoint.txt
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas   2076616 Oct 12 18:13 log.46676269._083101.job.log.1
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:13 boinc_mmap_file
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas       357 Oct 12 18:13 output.list
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:13 runtime_log
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas   2590720 Oct 12 18:13 result.tar.gz
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 18:13 runtime_log.err
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas       657 Oct 12 18:13 IrgKDmOnDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSZkNDmwQuOGn.diag
[2025-10-12 18:13:38] -rw-r--r--. 1 boincer umatlas     21043 Oct 12 18:13 stderr.txt
[2025-10-12 18:13:38] HITS file was successfully produced:
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas 193621027 Oct 12 18:09 shared/HITS.pool.root.1
[2025-10-12 18:13:38]  *** Contents of shared directory: ***
[2025-10-12 18:13:38] total 409832
[2025-10-12 18:13:38] -rw-r--r--. 2 boincer umatlas 222854567 Oct 12 13:36 ATLAS.root_0
[2025-10-12 18:13:38] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 13:36 input.tar.gz
[2025-10-12 18:13:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:36 start_atlas.sh
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas 193621027 Oct 12 18:09 HITS.pool.root.1
[2025-10-12 18:13:38] -rw-------. 1 boincer umatlas   2590720 Oct 12 18:13 result.tar.gz
18:13:40 (855666): run_atlas exited; CPU time 47091.037260
18:13:40 (855666): called boinc_finish(0)

</stderr_txt>
]]>

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