Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:06:39 (1974549): wrapper (7.7.26015): starting
04:06:39 (1974549): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 04:06:39] Arguments: --nthreads 4
[2025-10-13 04:06:39] Threads: 4
[2025-10-13 04:06:39] Checking for CVMFS
[2025-10-13 04:06:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:06:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:06:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:06:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:06:39] 2.9.2.0 168809 5080 97664 151643 2 188 29733827 36864000 913 130560 0 4696418 99.992 173553 837 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 04:06:39] CVMFS is ok
[2025-10-13 04:06:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:06:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:06:39] Further information can be found at the LHC@home message board.
[2025-10-13 04:06:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:06:39] Checking for apptainer binary...
[2025-10-13 04:06:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:06:39] Running /usr/bin/apptainer --version
[2025-10-13 04:06:39] apptainer version 1.4.1-1.1
[2025-10-13 04:06:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:06:39] thA334
[2025-10-13 04:06:39] apptainer works
[2025-10-13 04:06:39] Set ATHENA_PROC_NUMBER=4
[2025-10-13 04:06:39] Set ATHENA_CORE_NUMBER=4
[2025-10-13 04:06:39] Starting ATLAS job with PandaID=6840389974
[2025-10-13 04:06:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:16:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:16:59] 2025-10-13 03:16:28,343 | INFO     | ***************************************
[2025-10-13 05:16:59] 2025-10-13 03:16:28,343 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:16:59] 2025-10-13 03:16:28,343 | INFO     | ***************************************
[2025-10-13 05:16:59] 2025-10-13 03:16:28,343 | INFO     | 
[2025-10-13 05:16:59] 2025-10-13 03:16:28,344 | INFO     | architecture information:
[2025-10-13 05:16:59] 2025-10-13 03:16:28,344 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:16:59] 2025-10-13 03:16:28,356 | INFO     | cat /etc/os-release:
[2025-10-13 05:16:59] NAME="CentOS Linux"
[2025-10-13 05:16:59] VERSION="7 (Core)"
[2025-10-13 05:16:59] ID="centos"
[2025-10-13 05:16:59] ID_LIKE="rhel fedora"
[2025-10-13 05:16:59] VERSION_ID="7"
[2025-10-13 05:16:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:16:59] ANSI_COLOR="0;31"
[2025-10-13 05:16:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:16:59] HOME_URL="https://www.centos.org/"
[2025-10-13 05:16:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:16:59] 
[2025-10-13 05:16:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:16:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:16:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:16:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:16:59] 
[2025-10-13 05:16:59] 2025-10-13 03:16:28,357 | INFO     | ***************************************
[2025-10-13 05:16:59] 2025-10-13 03:16:28,860 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 05:16:59] 2025-10-13 03:16:28,876 | INFO     | sufficient remaining disk space (229553209344 B)
[2025-10-13 05:16:59] 2025-10-13 03:16:28,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:16:59] 2025-10-13 03:16:28,876 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:16:59] 2025-10-13 03:16:28,876 | INFO     | update_server=False
[2025-10-13 05:16:59] 2025-10-13 03:16:28,876 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:16:59] 2025-10-13 03:16:28,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:16:59] 2025-10-13 03:16:29,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:16:59] 2025-10-13 03:16:29,175 | INFO     | all data control threads have been joined
[2025-10-13 05:16:59] 2025-10-13 03:16:29,275 | INFO     | all payload control threads have been joined
[2025-10-13 05:16:59] 2025-10-13 03:16:29,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:16:59] 2025-10-13 03:16:29,608 | INFO     | aborting loop
[2025-10-13 05:16:59] 2025-10-13 03:16:29,643 | INFO     | all job control threads have been joined
[2025-10-13 05:16:59] 2025-10-13 03:16:29,882 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:29,882 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:29,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:16:59] 2025-10-13 03:16:30,181 | INFO     | [data] control thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:30,281 | INFO     | [payload] control thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:30,561 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:30,588 | INFO     | [job] validate thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:30,613 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:30,648 | INFO     | [job] control thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:30,697 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:30,729 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:30,775 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:31,086 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:31,154 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:31,296 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:31,325 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:33,890 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:16:59] 2025-10-13 03:16:51,955 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:16:59] 2025-10-13 03:16:53,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500750849856)>', '<ExcThread(monitor, started 140499444819712)>']
[2025-10-13 05:16:59] 2025-10-13 03:16:58,425 | INFO     | all workflow threads have been joined
[2025-10-13 05:16:59] 2025-10-13 03:16:58,425 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:16:59] 2025-10-13 03:16:58,426 | INFO     | traces error code: 0
[2025-10-13 05:16:59] 2025-10-13 03:16:58,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:16:59] 2025-10-13 03:16:59,456 | INFO     | PID=1978361 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:16:59] 2025-10-13 03:16:59,457 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:16:59] 2025-10-13 03:16:59,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:16:59] 2025-10-13 03:16:59,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:16:59] 2025-10-13 03:16:59,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:16:59] 2025-10-13 03:16:59,457 | INFO     | [monitor] control thread has ended
[2025-10-13 05:16:59] 2025-10-13 03:16:59,520 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:16:59] 2025-10-13 03:16:59,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:16:59] 2025-10-13 03:16:59,527 [wrapper] pilotpid: 1978361
[2025-10-13 05:16:59] 2025-10-13 03:16:59,531 [wrapper] Pilot exit status: 0
[2025-10-13 05:16:59] 2025-10-13 03:16:59,542 [wrapper] pandaids: 6840389974
[2025-10-13 05:16:59] 2025-10-13 03:16:59,562 [wrapper] cleanup supervisor_pilot 1997431 1978362
[2025-10-13 05:16:59] 2025-10-13 03:16:59,566 [wrapper] Test setup, not cleaning
[2025-10-13 05:16:59] 2025-10-13 03:16:59,569 [wrapper] apfmon messages muted
[2025-10-13 05:16:59] 2025-10-13 03:16:59,573 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:16:59] 2025-10-13 03:16:59,576 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:16:59]  *** Error codes and diagnostics ***
[2025-10-13 05:16:59]     "exeErrorCode": 0,
[2025-10-13 05:16:59]     "exeErrorDiag": "",
[2025-10-13 05:16:59]     "pilotErrorCode": 0,
[2025-10-13 05:16:59]     "pilotErrorDiag": "",
[2025-10-13 05:16:59]  *** Listing of results directory ***
[2025-10-13 05:16:59] total 408896
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:01 pilot3.tar.gz
[2025-10-13 05:16:59] -rwx------ 1 boinc boinc     36292 Oct 12 18:08 runpilot2-wrapper.sh
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:08 queuedata.json
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc       100 Oct 13 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:16:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 04:06 run_atlas
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc       105 Oct 13 04:06 job.xml
[2025-10-13 05:16:59] -rw-r--r-- 2 boinc boinc 219168815 Oct 13 04:06 EVNT.46676267._001808.pool.root.1
[2025-10-13 05:16:59] -rw-r--r-- 2 boinc boinc    569680 Oct 13 04:06 input.tar.gz
[2025-10-13 05:16:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:06 start_atlas.sh
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:06 boinc_setup_complete
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc      6368 Oct 13 04:06 init_data.xml
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:06 boinc_lockfile
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc      2548 Oct 13 04:06 pandaJob.out
[2025-10-13 05:16:59] -rw------- 1 boinc boinc    975595 Oct 13 04:06 agis_schedconf.cvmfs.json
[2025-10-13 05:16:59] -rw------- 1 boinc boinc   1560580 Oct 13 04:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:16:59] drwx------ 5 boinc boinc      4096 Oct 13 04:06 pilot3
[2025-10-13 05:16:59] -rw------- 1 boinc boinc       228 Oct 13 04:08 log.46676269._078953.job.log.tgz.1
[2025-10-13 05:16:59] -rw------- 1 boinc boinc       228 Oct 13 04:08 PanDA_Pilot-6839989621
[2025-10-13 05:16:59] -rw------- 1 boinc boinc       135 Oct 13 04:11 HoXKDmIoAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWujNDmACoeJn.diag
[2025-10-13 05:16:59] drwxrwx--x 2 boinc boinc      4096 Oct 13 04:11 shared
[2025-10-13 05:16:59] -rw------- 1 boinc boinc 193912776 Oct 13 05:16 HITS.46676269._083100.pool.root.1
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc       529 Oct 13 05:16 boinc_task_state.xml
[2025-10-13 05:16:59] -rw------- 1 boinc boinc        95 Oct 13 05:16 pilot_heartbeat.json
[2025-10-13 05:16:59] -rw------- 1 boinc boinc      1020 Oct 13 05:16 memory_monitor_summary.json
[2025-10-13 05:16:59] -rw------- 1 boinc boinc    240729 Oct 13 05:16 log.46676269._083100.job.log.tgz.1
[2025-10-13 05:16:59] -rw------- 1 boinc boinc      7770 Oct 13 05:16 heartbeat.json
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:16 boinc_mmap_file
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc        27 Oct 13 05:16 wrapper_checkpoint.txt
[2025-10-13 05:16:59] -rw------- 1 boinc boinc       747 Oct 13 05:16 pilotlog.txt
[2025-10-13 05:16:59] -rw------- 1 boinc boinc    623626 Oct 13 05:16 log.46676269._083100.job.log.1
[2025-10-13 05:16:59] -rw------- 1 boinc boinc       357 Oct 13 05:16 output.list
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc       680 Oct 13 05:16 runtime_log
[2025-10-13 05:16:59] -rw------- 1 boinc boinc    880640 Oct 13 05:16 result.tar.gz
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc      8837 Oct 13 05:16 runtime_log.err
[2025-10-13 05:16:59] -rw------- 1 boinc boinc       658 Oct 13 05:16 fcfKDmOnDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRZkNDmdsQv6m.diag
[2025-10-13 05:16:59] -rw-r--r-- 1 boinc boinc      9328 Oct 13 05:16 stderr.txt
[2025-10-13 05:16:59] HITS file was successfully produced:
[2025-10-13 05:16:59] -rw------- 1 boinc boinc 193912776 Oct 13 05:16 shared/HITS.pool.root.1
[2025-10-13 05:16:59]  *** Contents of shared directory: ***
[2025-10-13 05:16:59] total 404848
[2025-10-13 05:16:59] -rw-r--r-- 2 boinc boinc 219168815 Oct 13 04:06 ATLAS.root_0
[2025-10-13 05:16:59] -rw-r--r-- 2 boinc boinc    569680 Oct 13 04:06 input.tar.gz
[2025-10-13 05:16:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:06 start_atlas.sh
[2025-10-13 05:16:59] -rw------- 1 boinc boinc 193912776 Oct 13 05:16 HITS.pool.root.1
[2025-10-13 05:16:59] -rw------- 1 boinc boinc    880640 Oct 13 05:16 result.tar.gz
05:17:01 (1974549): run_atlas exited; CPU time 15674.777238
05:17:01 (1974549): called boinc_finish(0)

</stderr_txt>
]]>

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