Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
15:34:54 (497910): wrapper (7.7.26015): starting
15:34:54 (497910): wrapper: running run_atlas (--nthreads 5)
[2025-10-12 15:34:54] Arguments: --nthreads 5
[2025-10-12 15:34:54] Threads: 5
[2025-10-12 15:34:54] Checking for CVMFS
[2025-10-12 15:34:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:34:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:34:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:34:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:34:54] 2.11.0.0 2490241 3561 104736 151635 1 57 2686436 4096001 4798 130560 0 17875395 99.998 266385 5085 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 15:34:54] CVMFS is ok
[2025-10-12 15:34:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:34:54] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 15:34:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 15:34:54] Further information can be found at the LHC@home message board.
[2025-10-12 15:34:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:34:54] Checking for apptainer binary...
[2025-10-12 15:34:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:34:54] Running /usr/bin/apptainer --version
[2025-10-12 15:34:54] apptainer version 1.4.3
[2025-10-12 15:34:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:34:54] x32-linux4
[2025-10-12 15:34:54] apptainer works
[2025-10-12 15:34:54] Set ATHENA_PROC_NUMBER=5
[2025-10-12 15:34:54] Set ATHENA_CORE_NUMBER=5
[2025-10-12 15:34:54] Starting ATLAS job with PandaID=6840181332
[2025-10-12 15:34:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:34:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:34:20] 2025-10-12 21:33:34,154 | INFO     | mean y: 2364137.8974358975
[2025-10-12 17:34:20] 2025-10-12 21:33:34,154 | INFO     | -- intersect: 21780760996.37589
[2025-10-12 17:34:20] 2025-10-12 21:33:34,154 | INFO     | intersect: 21780760996.37589
[2025-10-12 17:34:20] 2025-10-12 21:33:34,154 | INFO     | chi2: 1.9100311718117937
[2025-10-12 17:34:20] 2025-10-12 21:33:34,155 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,155 | INFO     | sum of deviations: 1482642758.9999993
[2025-10-12 17:34:20] 2025-10-12 21:33:34,155 | INFO     | mean x: 1760301110.5
[2025-10-12 17:34:20] 2025-10-12 21:33:34,155 | INFO     | mean y: 2382581.535714286
[2025-10-12 17:34:20] 2025-10-12 21:33:34,155 | INFO     | -- intersect: -5988980168.135611
[2025-10-12 17:34:20] 2025-10-12 21:33:34,155 | INFO     | intersect: -5988980168.135611
[2025-10-12 17:34:20] 2025-10-12 21:33:34,155 | INFO     | chi2: 1.1419045396804333
[2025-10-12 17:34:20] 2025-10-12 21:33:34,156 | INFO     | current chi2=1.1419045396804333 (change=40.21539771011906 %)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,156 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,156 | INFO     | sum of deviations: 1732097134.9999998
[2025-10-12 17:34:20] 2025-10-12 21:33:34,156 | INFO     | mean x: 1760300958.0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,156 | INFO     | mean y: 2383264.476635514
[2025-10-12 17:34:20] 2025-10-12 21:33:34,156 | INFO     | -- intersect: -8024877039.030185
[2025-10-12 17:34:20] 2025-10-12 21:33:34,156 | INFO     | intersect: -8024877039.030185
[2025-10-12 17:34:20] 2025-10-12 21:33:34,157 | INFO     | chi2: 1.1434778250672
[2025-10-12 17:34:20] 2025-10-12 21:33:34,157 | INFO     | current chi2=1.1434778250672 (change=-0.13777731255950693 %)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,157 | INFO     | right removable region: 106
[2025-10-12 17:34:20] 2025-10-12 21:33:34,157 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,157 | INFO     | sum of deviations: -16756772925.499998
[2025-10-12 17:34:20] 2025-10-12 21:33:34,157 | INFO     | mean x: 1760301415.5
[2025-10-12 17:34:20] 2025-10-12 21:33:34,157 | INFO     | mean y: 2389854.223214286
[2025-10-12 17:34:20] 2025-10-12 21:33:34,158 | INFO     | -- intersect: 67716558959.553635
[2025-10-12 17:34:20] 2025-10-12 21:33:34,158 | INFO     | intersect: 67716558959.553635
[2025-10-12 17:34:20] 2025-10-12 21:33:34,158 | INFO     | chi2: 0.8187696177203938
[2025-10-12 17:34:20] 2025-10-12 21:33:34,158 | INFO     | current chi2=0.8187696177203938 (change=57.13318034785079 %)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,158 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,158 | INFO     | sum of deviations: -15487225950.0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,158 | INFO     | mean x: 1760301568.0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | mean y: 2386374.523364486
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | -- intersect: 71776673536.93976
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | intersect: 71776673536.93976
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | chi2: 0.8194865090760463
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | current chi2=0.8194865090760463 (change=-0.08755715162568042 %)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | left removable region: 20
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | sum of square deviations: 197203697.5
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | sum of deviations: -5445037723.5
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | mean x: 1760301537.5
[2025-10-12 17:34:20] 2025-10-12 21:33:34,159 | INFO     | mean y: 2402429.61627907
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | -- intersect: 48606502646.46211
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | intersect: 48606502646.46211
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | chi2: 0.0184658356751477
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | -- intersect: 48606502646.46211
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | current memory leak: -27.61 B/s (using 86 data points, chi2=0.02)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | could have reported an average CPU frequency of 3835 MHz (7 samples)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | ..............................
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | . Timing measurements:
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | . get job = 0 s
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | . initial setup = 2 s
[2025-10-12 17:34:20] 2025-10-12 21:33:34,160 | INFO     | . payload setup = 4 s
[2025-10-12 17:34:20] 2025-10-12 21:33:34,161 | INFO     | . stage-in = 0 s
[2025-10-12 17:34:20] 2025-10-12 21:33:34,161 | INFO     | . payload execution = 7082 s
[2025-10-12 17:34:20] 2025-10-12 21:33:34,161 | INFO     | . stage-out = 0 s
[2025-10-12 17:34:20] 2025-10-12 21:33:34,161 | INFO     | . log creation = 0 s
[2025-10-12 17:34:20] 2025-10-12 21:33:34,161 | INFO     | ..............................
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | 
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | job summary report
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | --------------------------------------------------
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | PanDA job id: 6840181332
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | task id: 46676269
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | errors: (none)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | pilot state: finished 
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | transexitcode: 0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | exeerrorcode: 0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | exeerrordiag: 
[2025-10-12 17:34:20] 2025-10-12 21:33:34,228 | INFO     | exitcode: 0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | exitmsg: OK
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | cpuconsumptiontime: 28486 s
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | nevents: 400
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | neventsw: 0
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | pid: 510304
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | pgrp: 510304
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | corecount: 5
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | event service: False
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | sizes: {0: 2348892, 3: 2349154, 11: 2349182, 7090: 2376543, 7091: 2385555, 7093: 2385611, 7097: 2385933}
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | --------------------------------------------------
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | 
[2025-10-12 17:34:20] 2025-10-12 21:33:34,229 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-12 17:34:20] 2025-10-12 21:33:34,242 | WARNING  | process 510304 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 17:34:20] 2025-10-12 21:33:34,243 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6840181332/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,245 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,245 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,245 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,247 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,247 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,247 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:34:20] 2025-10-12 21:33:34,247 | INFO     | job 6840181332 has completed (purged errors)
[2025-10-12 17:34:20] 2025-10-12 21:33:34,247 | INFO     | overall cleanup function is called
[2025-10-12 17:34:20] 2025-10-12 21:33:34,391 | INFO     | number of running child processes to parent process 510304: 1
[2025-10-12 17:34:20] 2025-10-12 21:33:34,391 | INFO     | maximum number of monitored processes: 6
[2025-10-12 17:34:20] 2025-10-12 21:33:34,391 | INFO     | aborting job monitoring since job object (job id=6840181332) has expired
[2025-10-12 17:34:20] 2025-10-12 21:33:34,629 | INFO     | PID=501757 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:34:20] 2025-10-12 21:33:34,629 | INFO     | .. there are 8 such processes running
[2025-10-12 17:34:20] 2025-10-12 21:33:35,250 | INFO     | --- collectZombieJob: --- 10, [510304]
[2025-10-12 17:34:20] 2025-10-12 21:33:35,251 | INFO     | zombie collector waiting for pid 510304
[2025-10-12 17:34:20] 2025-10-12 21:33:35,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:34:20] 2025-10-12 21:33:35,251 | INFO     | collected zombie processes
[2025-10-12 17:34:20] 2025-10-12 21:33:35,251 | INFO     | will attempt to kill all subprocesses of pid=510304
[2025-10-12 17:34:20] 2025-10-12 21:33:35,398 | INFO     | process IDs to be killed: [510304] (in reverse order)
[2025-10-12 17:34:20] 2025-10-12 21:33:35,454 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:34:20] 2025-10-12 21:33:35,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:34:20] 2025-10-12 21:33:35,459 | INFO     | did not find any defunct processes belonging to 510304
[2025-10-12 17:34:20] 2025-10-12 21:33:35,463 | INFO     | did not find any defunct processes belonging to 510304
[2025-10-12 17:34:20] 2025-10-12 21:33:35,463 | INFO     | ready for new job
[2025-10-12 17:34:20] 2025-10-12 21:33:35,463 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:34:20] 2025-10-12 21:33:35,464 | INFO     | ***************************************
[2025-10-12 17:34:20] 2025-10-12 21:33:35,464 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:34:20] 2025-10-12 21:33:35,464 | INFO     | ***************************************
[2025-10-12 17:34:20] 2025-10-12 21:33:35,464 | INFO     | 
[2025-10-12 17:34:20] 2025-10-12 21:33:35,466 | INFO     | architecture information:
[2025-10-12 17:34:20] 2025-10-12 21:33:35,466 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:34:20] 2025-10-12 21:33:35,478 | INFO     | cat /etc/os-release:
[2025-10-12 17:34:20] NAME="CentOS Linux"
[2025-10-12 17:34:20] VERSION="7 (Core)"
[2025-10-12 17:34:20] ID="centos"
[2025-10-12 17:34:20] ID_LIKE="rhel fedora"
[2025-10-12 17:34:20] VERSION_ID="7"
[2025-10-12 17:34:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:34:20] ANSI_COLOR="0;31"
[2025-10-12 17:34:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:34:20] HOME_URL="https://www.centos.org/"
[2025-10-12 17:34:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:34:20] 
[2025-10-12 17:34:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:34:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:34:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:34:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:34:20] 
[2025-10-12 17:34:20] 2025-10-12 21:33:35,479 | INFO     | ***************************************
[2025-10-12 17:34:20] 2025-10-12 21:33:35,981 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-12 17:34:20] 2025-10-12 21:33:35,993 | INFO     | sufficient remaining disk space (148808663040 B)
[2025-10-12 17:34:20] 2025-10-12 21:33:35,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:34:20] 2025-10-12 21:33:35,994 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:34:20] 2025-10-12 21:33:35,994 | INFO     | update_server=False
[2025-10-12 17:34:20] 2025-10-12 21:33:35,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:34:20] 2025-10-12 21:33:35,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:34:20] 2025-10-12 21:33:35,994 | INFO     | aborting loop
[2025-10-12 17:34:20] 2025-10-12 21:33:35,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:34:20] 2025-10-12 21:33:36,165 | INFO     | all payload control threads have been joined
[2025-10-12 17:34:20] 2025-10-12 21:33:36,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:34:20] 2025-10-12 21:33:36,731 | INFO     | all data control threads have been joined
[2025-10-12 17:34:20] 2025-10-12 21:33:36,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:34:20] 2025-10-12 21:33:36,849 | INFO     | all job control threads have been joined
[2025-10-12 17:34:20] 2025-10-12 21:33:36,995 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:36,999 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:36,999 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,171 | INFO     | [payload] control thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,192 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,279 | INFO     | [job] validate thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,279 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,580 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,630 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,726 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,735 | INFO     | [data] control thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,854 | INFO     | [job] control thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:37,954 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:38,743 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:33:40,384 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:34:20] 2025-10-12 21:34:06,872 | INFO     | PID=501757 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:34:20] 2025-10-12 21:34:06,872 | INFO     | .. there are 8 such processes running
[2025-10-12 17:34:20] 2025-10-12 21:34:06,873 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:34:20] 2025-10-12 21:34:06,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:34:20] 2025-10-12 21:34:06,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:34:20] 2025-10-12 21:34:14,304 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:34:20] 2025-10-12 21:34:15,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138440742672192)>', '<ExcThread(monitor, started 138439806674688)>']
[2025-10-12 17:34:20] 2025-10-12 21:34:15,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:34:20] 2025-10-12 21:34:15,918 | INFO     | [monitor] control thread has ended
[2025-10-12 17:34:20] 2025-10-12 21:34:20,356 | INFO     | all workflow threads have been joined
[2025-10-12 17:34:20] 2025-10-12 21:34:20,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:34:20] 2025-10-12 21:34:20,356 | INFO     | traces error code: 0
[2025-10-12 17:34:20] 2025-10-12 21:34:20,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:34:20] 2025-10-12 21:34:20,430 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:34:20] 2025-10-12 21:34:20,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:34:20] 2025-10-12 21:34:20,435 [wrapper] pilotpid: 501757
[2025-10-12 17:34:20] 2025-10-12 21:34:20,437 [wrapper] Pilot exit status: 0
[2025-10-12 17:34:20] 2025-10-12 21:34:20,444 [wrapper] pandaids: 6840181332
[2025-10-12 17:34:20] 2025-10-12 21:34:20,480 [wrapper] cleanup supervisor_pilot  700886 501758
[2025-10-12 17:34:20] 2025-10-12 21:34:20,483 [wrapper] Test setup, not cleaning
[2025-10-12 17:34:20] 2025-10-12 21:34:20,485 [wrapper] apfmon messages muted
[2025-10-12 17:34:20] 2025-10-12 21:34:20,487 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:34:20] 2025-10-12 21:34:20,489 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:34:20]  *** Error codes and diagnostics ***
[2025-10-12 17:34:20]     "exeErrorCode": 0,
[2025-10-12 17:34:20]     "exeErrorDiag": "",
[2025-10-12 17:34:20]     "pilotErrorCode": 0,
[2025-10-12 17:34:20]     "pilotErrorDiag": "",
[2025-10-12 17:34:20]  *** Listing of results directory ***
[2025-10-12 17:34:20] total 417424
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 17:34:20] -rwx------ 1 boinc boinc     36292 Oct 12 10:10 runpilot2-wrapper.sh
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc      5112 Oct 12 10:10 queuedata.json
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc       100 Oct 12 15:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:34:20] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 15:34 run_atlas
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc       105 Oct 12 15:34 job.xml
[2025-10-12 17:34:20] -rw-r--r-- 2 boinc boinc 221630656 Oct 12 15:34 EVNT.46676267._004214.pool.root.1
[2025-10-12 17:34:20] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:34 start_atlas.sh
[2025-10-12 17:34:20] drwxrwx--x 2 boinc boinc      4096 Oct 12 15:34 shared
[2025-10-12 17:34:20] -rw-r--r-- 2 boinc boinc    569679 Oct 12 15:34 input.tar.gz
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:34 boinc_setup_complete
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc      9723 Oct 12 15:34 init_data.xml
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc         0 Oct 12 15:34 boinc_lockfile
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc      2550 Oct 12 15:34 pandaJob.out
[2025-10-12 17:34:20] -rw------- 1 boinc boinc    975536 Oct 12 15:35 agis_schedconf.cvmfs.json
[2025-10-12 17:34:20] -rw------- 1 boinc boinc   1560580 Oct 12 15:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:34:20] drwx------ 5 boinc boinc      4096 Oct 12 15:35 pilot3
[2025-10-12 17:34:20] -rw------- 1 boinc boinc 199209507 Oct 12 17:33 HITS.46676269._080291.pool.root.1
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc       529 Oct 12 17:33 boinc_task_state.xml
[2025-10-12 17:34:20] -rw------- 1 boinc boinc      1025 Oct 12 17:33 memory_monitor_summary.json
[2025-10-12 17:34:20] -rw------- 1 boinc boinc    309158 Oct 12 17:33 log.46676269._080291.job.log.tgz.1
[2025-10-12 17:34:20] -rw------- 1 boinc boinc      7745 Oct 12 17:33 heartbeat.json
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc      8192 Oct 12 17:34 boinc_mmap_file
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc        27 Oct 12 17:34 wrapper_checkpoint.txt
[2025-10-12 17:34:20] -rw------- 1 boinc boinc        95 Oct 12 17:34 pilot_heartbeat.json
[2025-10-12 17:34:20] -rw------- 1 boinc boinc      4830 Oct 12 17:34 pilotlog.txt
[2025-10-12 17:34:20] -rw------- 1 boinc boinc   1032506 Oct 12 17:34 log.46676269._080291.job.log.1
[2025-10-12 17:34:20] -rw------- 1 boinc boinc       357 Oct 12 17:34 output.list
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc       620 Oct 12 17:34 runtime_log
[2025-10-12 17:34:20] -rw------- 1 boinc boinc   1361920 Oct 12 17:34 result.tar.gz
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc      8764 Oct 12 17:34 runtime_log.err
[2025-10-12 17:34:20] -rw------- 1 boinc boinc       644 Oct 12 17:34 lX9MDmJxBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyAkNDmg1hw6m.diag
[2025-10-12 17:34:20] -rw-r--r-- 1 boinc boinc     21249 Oct 12 17:34 stderr.txt
[2025-10-12 17:34:20] HITS file was successfully produced:
[2025-10-12 17:34:20] -rw------- 1 boinc boinc 199209507 Oct 12 17:33 shared/HITS.pool.root.1
[2025-10-12 17:34:20]  *** Contents of shared directory: ***
[2025-10-12 17:34:20] total 412900
[2025-10-12 17:34:20] -rw-r--r-- 2 boinc boinc 221630656 Oct 12 15:34 ATLAS.root_0
[2025-10-12 17:34:20] -rw-r--r-- 2 boinc boinc     15120 Oct 12 15:34 start_atlas.sh
[2025-10-12 17:34:20] -rw-r--r-- 2 boinc boinc    569679 Oct 12 15:34 input.tar.gz
[2025-10-12 17:34:20] -rw------- 1 boinc boinc 199209507 Oct 12 17:33 HITS.pool.root.1
[2025-10-12 17:34:20] -rw------- 1 boinc boinc   1361920 Oct 12 17:34 result.tar.gz
17:34:21 (497910): run_atlas exited; CPU time 28578.514799
17:34:21 (497910): called boinc_finish(0)

</stderr_txt>
]]>

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