Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:38:47 (208914): wrapper (7.7.26015): starting
15:38:47 (208914): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 15:38:47] Arguments: --nthreads 10
[2025-10-12 15:38:47] Threads: 10
[2025-10-12 15:38:47] Checking for CVMFS
[2025-10-12 15:38:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:38:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:38:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:38:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:38:47] 2.13.2.0 1630706 124242 150732 151635 0 272 37582882 40960000 18046 16776704 1 352146335 99.725 252602503 34074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 15:38:47] CVMFS is ok
[2025-10-12 15:38:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:38:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:38:47] Further information can be found at the LHC@home message board.
[2025-10-12 15:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:38:47] Checking for apptainer binary...
[2025-10-12 15:38:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:38:48] Running /usr/bin/apptainer --version
[2025-10-12 15:38:48] apptainer version 1.4.3-1.el9
[2025-10-12 15:38:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:38:48] c-212-16.aglt2.org
[2025-10-12 15:38:48] apptainer works
[2025-10-12 15:38:48] Set ATHENA_PROC_NUMBER=10
[2025-10-12 15:38:48] Set ATHENA_CORE_NUMBER=10
[2025-10-12 15:38:48] Starting ATLAS job with PandaID=6840181303
[2025-10-12 15:38:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:54:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:54:29]  replicas=None
[2025-10-12 16:54:29]  scope=mc23_13p6TeV
[2025-10-12 16:54:29]  status=None
[2025-10-12 16:54:29]  status_code=0
[2025-10-12 16:54:29]  storage_token=
[2025-10-12 16:54:29]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6840181303/log.46676269._080262.job.log.tgz.1
[2025-10-12 16:54:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/b1/log.46676269._080262.job.log.tgz.1
[2025-10-12 16:54:29]  workdir=None
[2025-10-12 16:54:29] ]
[2025-10-12 16:54:29] 2025-10-12 20:53:50,993 | INFO     | transferring file log.46676269._080262.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6840181303/log.46676269._080262.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 16:54:29] 2025-10-12 20:53:50,993 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6840181303/log.46676269._080262.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._080262.job
[2025-10-12 16:54:29] 2025-10-12 20:53:51,012 | INFO     | adding to output.list: log.46676269._080262.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/b1/log.46676269._080262.job.log.tg
[2025-10-12 16:54:29] 2025-10-12 20:53:51,013 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 16:54:29] 2025-10-12 20:53:51,013 | INFO     | summary of transferred files:
[2025-10-12 16:54:29] 2025-10-12 20:53:51,013 | INFO     |  -- lfn=log.46676269._080262.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 16:54:29] 2025-10-12 20:53:51,013 | INFO     | stage-out finished correctly
[2025-10-12 16:54:29] 2025-10-12 20:53:51,179 | INFO     | time since job start (4492s) is within the limit (172800.0s)
[2025-10-12 16:54:29] 2025-10-12 20:53:51,298 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 16:54:29] 2025-10-12 20:53:52,619 | INFO     | monitor loop #320: job 0:6840181303 is in state 'finished'
[2025-10-12 16:54:29] 2025-10-12 20:53:52,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:54:29] 2025-10-12 20:53:52,781 | INFO     | job 6840181303 has state=finished
[2025-10-12 16:54:29] 2025-10-12 20:53:52,782 | INFO     | preparing for final server update for job 6840181303 in state='finished'
[2025-10-12 16:54:29] 2025-10-12 20:53:52,782 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:54:29] 2025-10-12 20:53:52,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:54:29] 2025-10-12 20:53:52,782 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:54:29] 2025-10-12 20:53:52,783 | INFO     | job 6840181303 has finished - writing final server update
[2025-10-12 16:54:29] 2025-10-12 20:53:52,783 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:54:29] 2025-10-12 20:53:52,784 | INFO     | executing command: lscpu
[2025-10-12 16:54:29] 2025-10-12 20:53:52,863 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:54:29] 2025-10-12 20:53:53,185 | INFO     | time since job start (4494s) is within the limit (172800.0s)
[2025-10-12 16:54:29] 2025-10-12 20:53:55,122 | INFO     | monitor loop #321: job 0:6840181303 is in state 'finished'
[2025-10-12 16:54:29] 2025-10-12 20:53:55,122 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:54:29] 2025-10-12 20:53:55,190 | INFO     | time since job start (4496s) is within the limit (172800.0s)
[2025-10-12 16:54:29] 2025-10-12 20:53:56,199 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 16:54:29] 2025-10-12 20:53:56,803 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 16:54:29] 2025-10-12 20:53:56,816 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3129.8986249999984
[2025-10-12 16:54:29] 2025-10-12 20:53:56,831 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840181303/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:54:29] 2025-10-12 20:53:56,832 | INFO     | extracted standard info from prmon json
[2025-10-12 16:54:29] 2025-10-12 20:53:56,832 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:54:29] 2025-10-12 20:53:56,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:54:29] 2025-10-12 20:53:56,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:54:29] 2025-10-12 20:53:56,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:54:29] 2025-10-12 20:53:56,834 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:54:29] 2025-10-12 20:53:56,834 | INFO     | sum of square deviations: 93262432.02985081
[2025-10-12 16:54:29] 2025-10-12 20:53:56,835 | INFO     | sum of deviations: -6300580850.283584
[2025-10-12 16:54:29] 2025-10-12 20:53:56,835 | INFO     | mean x: 1760300286.2985075
[2025-10-12 16:54:29] 2025-10-12 20:53:56,835 | INFO     | mean y: 2681510.1641791044
[2025-10-12 16:54:29] 2025-10-12 20:53:56,835 | INFO     | -- intersect: 118924245458.34837
[2025-10-12 16:54:29] 2025-10-12 20:53:56,835 | INFO     | intersect: 118924245458.34837
[2025-10-12 16:54:29] 2025-10-12 20:53:56,835 | INFO     | chi2: 0.02722231022556146
[2025-10-12 16:54:29] 2025-10-12 20:53:56,835 | INFO     | -- intersect: 118924245458.34837
[2025-10-12 16:54:29] 2025-10-12 20:53:56,835 | INFO     | current memory leak: -67.56 B/s (using 67 data points, chi2=0.03)
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | could have reported an average CPU frequency of 3158 MHz (6 samples)
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | ..............................
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | . Timing measurements:
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | . get job = 0 s
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | . initial setup = 2 s
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | . payload setup = 7 s
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | . stage-in = 0 s
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | . payload execution = 4464 s
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | . stage-out = 0 s
[2025-10-12 16:54:29] 2025-10-12 20:53:56,836 | INFO     | . log creation = 0 s
[2025-10-12 16:54:29] 2025-10-12 20:53:56,837 | INFO     | ..............................
[2025-10-12 16:54:29] 2025-10-12 20:53:56,953 | INFO     | 
[2025-10-12 16:54:29] 2025-10-12 20:53:56,953 | INFO     | job summary report
[2025-10-12 16:54:29] 2025-10-12 20:53:56,953 | INFO     | --------------------------------------------------
[2025-10-12 16:54:29] 2025-10-12 20:53:56,953 | INFO     | PanDA job id: 6840181303
[2025-10-12 16:54:29] 2025-10-12 20:53:56,953 | INFO     | task id: 46676269
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | errors: (none)
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | pilot state: finished 
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | transexitcode: 0
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | exeerrorcode: 0
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | exeerrordiag: 
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | exitcode: 0
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | exitmsg: OK
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | cpuconsumptiontime: 33575 s
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | nevents: 400
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | neventsw: 0
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | pid: 219648
[2025-10-12 16:54:29] 2025-10-12 20:53:56,954 | INFO     | pgrp: 219648
[2025-10-12 16:54:29] 2025-10-12 20:53:56,955 | INFO     | corecount: 10
[2025-10-12 16:54:29] 2025-10-12 20:53:56,955 | INFO     | event service: False
[2025-10-12 16:54:29] 2025-10-12 20:53:56,955 | INFO     | sizes: {0: 2348628, 1: 2348883, 5: 2349145, 12: 2349201, 4475: 2375285, 4476: 2384467, 4482: 2384605}
[2025-10-12 16:54:29] 2025-10-12 20:53:56,955 | INFO     | --------------------------------------------------
[2025-10-12 16:54:29] 2025-10-12 20:53:56,955 | INFO     | 
[2025-10-12 16:54:29] 2025-10-12 20:53:56,955 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 16:54:29] 2025-10-12 20:53:56,975 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,975 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,975 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,975 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:54:29] 2025-10-12 20:53:56,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,977 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:54:29] 2025-10-12 20:53:56,977 | INFO     | job 6840181303 has completed (purged errors)
[2025-10-12 16:54:29] 2025-10-12 20:53:56,977 | INFO     | overall cleanup function is called
[2025-10-12 16:54:29] 2025-10-12 20:53:57,985 | INFO     | --- collectZombieJob: --- 10, [219648]
[2025-10-12 16:54:29] 2025-10-12 20:53:57,985 | INFO     | zombie collector waiting for pid 219648
[2025-10-12 16:54:29] 2025-10-12 20:53:57,985 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:54:29] 2025-10-12 20:53:57,985 | INFO     | collected zombie processes
[2025-10-12 16:54:29] 2025-10-12 20:53:57,985 | INFO     | will attempt to kill all subprocesses of pid=219648
[2025-10-12 16:54:29] 2025-10-12 20:53:58,288 | INFO     | process IDs to be killed: [219648] (in reverse order)
[2025-10-12 16:54:29] 2025-10-12 20:53:58,392 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:54:29] 2025-10-12 20:53:58,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:54:29] 2025-10-12 20:53:58,403 | INFO     | did not find any defunct processes belonging to 219648
[2025-10-12 16:54:29] 2025-10-12 20:53:58,414 | INFO     | did not find any defunct processes belonging to 219648
[2025-10-12 16:54:29] 2025-10-12 20:53:58,415 | INFO     | ready for new job
[2025-10-12 16:54:29] 2025-10-12 20:53:58,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:54:29] 2025-10-12 20:53:58,416 | INFO     | ***************************************
[2025-10-12 16:54:29] 2025-10-12 20:53:58,416 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:54:29] 2025-10-12 20:53:58,416 | INFO     | ***************************************
[2025-10-12 16:54:29] 2025-10-12 20:53:58,416 | INFO     | 
[2025-10-12 16:54:29] 2025-10-12 20:53:58,419 | INFO     | architecture information:
[2025-10-12 16:54:29] 2025-10-12 20:53:58,420 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:54:29] 2025-10-12 20:53:58,431 | INFO     | cat /etc/os-release:
[2025-10-12 16:54:29] NAME="CentOS Linux"
[2025-10-12 16:54:29] VERSION="7 (Core)"
[2025-10-12 16:54:29] ID="centos"
[2025-10-12 16:54:29] ID_LIKE="rhel fedora"
[2025-10-12 16:54:29] VERSION_ID="7"
[2025-10-12 16:54:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:54:29] ANSI_COLOR="0;31"
[2025-10-12 16:54:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:54:29] HOME_URL="https://www.centos.org/"
[2025-10-12 16:54:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:54:29] 
[2025-10-12 16:54:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:54:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:54:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:54:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:54:29] 
[2025-10-12 16:54:29] 2025-10-12 20:53:58,432 | INFO     | ***************************************
[2025-10-12 16:54:29] 2025-10-12 20:53:58,935 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 16:54:29] 2025-10-12 20:53:58,971 | INFO     | sufficient remaining disk space (127222677504 B)
[2025-10-12 16:54:29] 2025-10-12 20:53:58,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:54:29] 2025-10-12 20:53:58,971 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:54:29] 2025-10-12 20:53:58,971 | INFO     | update_server=False
[2025-10-12 16:54:29] 2025-10-12 20:53:58,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:54:29] 2025-10-12 20:53:58,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:54:29] 2025-10-12 20:53:58,972 | INFO     | aborting loop
[2025-10-12 16:54:29] 2025-10-12 20:53:59,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:54:29] 2025-10-12 20:53:59,236 | INFO     | all job control threads have been joined
[2025-10-12 16:54:29] 2025-10-12 20:53:59,836 | INFO     | all data control threads have been joined
[2025-10-12 16:54:29] 2025-10-12 20:53:59,976 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:53:59,977 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:00,020 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:00,242 | INFO     | [job] control thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:00,372 | INFO     | all payload control threads have been joined
[2025-10-12 16:54:29] 2025-10-12 20:54:00,414 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:00,841 | INFO     | [data] control thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:01,002 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:01,109 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:01,174 | INFO     | [job] validate thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:01,207 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:01,237 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:01,377 | INFO     | [payload] control thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:01,412 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:01,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:54:29] 2025-10-12 20:54:01,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:54:29] 2025-10-12 20:54:02,955 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:05,882 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:06,389 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:54:29] 2025-10-12 20:54:09,148 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:54:29] 2025-10-12 20:54:10,154 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:54:29] 2025-10-12 20:54:10,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696653559616)>', '<ExcThread(monitor, started 139695866496768)>']
[2025-10-12 16:54:29] 2025-10-12 20:54:15,662 | INFO     | all workflow threads have been joined
[2025-10-12 16:54:29] 2025-10-12 20:54:15,663 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:54:29] 2025-10-12 20:54:15,663 | INFO     | traces error code: 0
[2025-10-12 16:54:29] 2025-10-12 20:54:15,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:54:29] 2025-10-12 20:54:27,233 | INFO     | 4500s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 16:54:29] 2025-10-12 20:54:28,699 | INFO     | PID=212567 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 16:54:29] 2025-10-12 20:54:28,700 | INFO     | .. there are 21 such processes running
[2025-10-12 16:54:29] 2025-10-12 20:54:28,700 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:54:29] 2025-10-12 20:54:28,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:54:29] 2025-10-12 20:54:28,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:54:29] 2025-10-12 20:54:28,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:54:29] 2025-10-12 20:54:28,701 | INFO     | [monitor] control thread has ended
[2025-10-12 16:54:29] 2025-10-12 20:54:29,032 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:54:29] 2025-10-12 20:54:29,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:54:29] 2025-10-12 20:54:29,040 [wrapper] pilotpid: 212567
[2025-10-12 16:54:29] 2025-10-12 20:54:29,051 [wrapper] Pilot exit status: 0
[2025-10-12 16:54:29] 2025-10-12 20:54:29,084 [wrapper] pandaids: 6840181303
[2025-10-12 16:54:29] 2025-10-12 20:54:29,191 [wrapper] cleanup supervisor_pilot  504201 212568
[2025-10-12 16:54:29] 2025-10-12 20:54:29,195 [wrapper] Test setup, not cleaning
[2025-10-12 16:54:29] 2025-10-12 20:54:29,199 [wrapper] apfmon messages muted
[2025-10-12 16:54:29] 2025-10-12 20:54:29,202 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:54:29] 2025-10-12 20:54:29,204 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:54:29]  *** Error codes and diagnostics ***
[2025-10-12 16:54:29]     "exeErrorCode": 0,
[2025-10-12 16:54:29]     "exeErrorDiag": "",
[2025-10-12 16:54:29]     "pilotErrorCode": 0,
[2025-10-12 16:54:29]     "pilotErrorDiag": "",
[2025-10-12 16:54:29]  *** Listing of results directory ***
[2025-10-12 16:54:29] total 407920
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:08 queuedata.json
[2025-10-12 16:54:29] -rwx------. 1 boincer umatlas     36292 Oct 12 10:09 runpilot2-wrapper.sh
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:54:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:38 run_atlas
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:38 job.xml
[2025-10-12 16:54:29] -rw-r--r--. 2 boincer umatlas 220302997 Oct 12 15:38 EVNT.46676267._004213.pool.root.1
[2025-10-12 16:54:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:38 start_atlas.sh
[2025-10-12 16:54:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:38 shared
[2025-10-12 16:54:29] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:38 input.tar.gz
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:38 boinc_lockfile
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 15:38 pandaJob.out
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas    975536 Oct 12 15:38 agis_schedconf.cvmfs.json
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:54:29] drwx------. 5 boincer umatlas      4096 Oct 12 15:38 pilot3
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas      6945 Oct 12 16:45 init_data.xml
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas 191515028 Oct 12 16:53 HITS.46676269._080262.pool.root.1
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas       529 Oct 12 16:53 boinc_task_state.xml
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas      1047 Oct 12 16:53 memory_monitor_summary.json
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas    342840 Oct 12 16:53 log.46676269._080262.job.log.tgz.1
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas      7798 Oct 12 16:53 heartbeat.json
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas        95 Oct 12 16:54 pilot_heartbeat.json
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas       937 Oct 12 16:54 pilotlog.txt
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:54 boinc_mmap_file
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas        27 Oct 12 16:54 wrapper_checkpoint.txt
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas    652025 Oct 12 16:54 log.46676269._080262.job.log.1
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas       357 Oct 12 16:54 output.list
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:54 runtime_log
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas   1013760 Oct 12 16:54 result.tar.gz
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 16:54 runtime_log.err
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas       655 Oct 12 16:54 rt6NDmYwBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmC3TMDmHztzqm.diag
[2025-10-12 16:54:29] -rw-r--r--. 1 boincer umatlas     21820 Oct 12 16:54 stderr.txt
[2025-10-12 16:54:29] HITS file was successfully produced:
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas 191515028 Oct 12 16:53 shared/HITS.pool.root.1
[2025-10-12 16:54:29]  *** Contents of shared directory: ***
[2025-10-12 16:54:29] total 403744
[2025-10-12 16:54:29] -rw-r--r--. 2 boincer umatlas 220302997 Oct 12 15:38 ATLAS.root_0
[2025-10-12 16:54:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:38 start_atlas.sh
[2025-10-12 16:54:29] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:38 input.tar.gz
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas 191515028 Oct 12 16:53 HITS.pool.root.1
[2025-10-12 16:54:29] -rw-------. 1 boincer umatlas   1013760 Oct 12 16:54 result.tar.gz
16:54:30 (208914): run_atlas exited; CPU time 33623.264544
16:54:30 (208914): called boinc_finish(0)

</stderr_txt>
]]>

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