Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:47:16 (1074159): wrapper (7.7.26015): starting
15:47:16 (1074159): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 15:47:16] Arguments: --nthreads 9
[2025-10-12 15:47:16] Threads: 9
[2025-10-12 15:47:16] Checking for CVMFS
[2025-10-12 15:47:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:47:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:47:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:47:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:47:17] 2.13.2.0 3029961 129679 514328 151635 0 244 31901329 40960000 24174 16776704 20 268328551 99.689 221228205 21356 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:47:17] CVMFS is ok
[2025-10-12 15:47:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:47:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:47:17] Further information can be found at the LHC@home message board.
[2025-10-12 15:47:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:47:17] Checking for apptainer binary...
[2025-10-12 15:47:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:47:17] Running /usr/bin/apptainer --version
[2025-10-12 15:47:17] apptainer version 1.4.3-1.el9
[2025-10-12 15:47:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:47:18] c7-11-14.aglt2.org
[2025-10-12 15:47:18] apptainer works
[2025-10-12 15:47:18] Set ATHENA_PROC_NUMBER=9
[2025-10-12 15:47:18] Set ATHENA_CORE_NUMBER=9
[2025-10-12 15:47:18] Starting ATLAS job with PandaID=6839928895
[2025-10-12 15:47:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:12:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:12:29] 2025-10-13 00:11:54,448 | INFO     | sum of square deviations: 5387904697.44402
[2025-10-12 20:12:29] 2025-10-13 00:11:54,450 | INFO     | sum of deviations: -21389958439.841694
[2025-10-12 20:12:29] 2025-10-13 00:11:54,450 | INFO     | mean x: 1760306415.6679537
[2025-10-12 20:12:29] 2025-10-13 00:11:54,450 | INFO     | mean y: 2179065.525096525
[2025-10-12 20:12:29] 2025-10-13 00:11:54,450 | INFO     | -- intersect: 6990587953.007175
[2025-10-12 20:12:29] 2025-10-13 00:11:54,450 | INFO     | intersect: 6990587953.007175
[2025-10-12 20:12:29] 2025-10-13 00:11:54,451 | INFO     | chi2: 2.779489205395994
[2025-10-12 20:12:29] 2025-10-13 00:11:54,451 | INFO     | sum of square deviations: 5081933117.66925
[2025-10-12 20:12:29] 2025-10-13 00:11:54,452 | INFO     | sum of deviations: -5809488813.850379
[2025-10-12 20:12:29] 2025-10-13 00:11:54,453 | INFO     | mean x: 1760306263.1811023
[2025-10-12 20:12:29] 2025-10-13 00:11:54,453 | INFO     | mean y: 2186710.322834646
[2025-10-12 20:12:29] 2025-10-13 00:11:54,453 | INFO     | -- intersect: 2014507476.478764
[2025-10-12 20:12:29] 2025-10-13 00:11:54,453 | INFO     | intersect: 2014507476.478764
[2025-10-12 20:12:29] 2025-10-13 00:11:54,453 | INFO     | chi2: 2.011244726580226
[2025-10-12 20:12:29] 2025-10-13 00:11:54,453 | INFO     | current chi2=2.011244726580226 (change=27.63977198847643 %)
[2025-10-12 20:12:29] 2025-10-13 00:11:54,453 | INFO     | sum of square deviations: 4787760097.188722
[2025-10-12 20:12:29] 2025-10-13 00:11:54,455 | INFO     | sum of deviations: -5724430073.967865
[2025-10-12 20:12:29] 2025-10-13 00:11:54,455 | INFO     | mean x: 1760306110.690763
[2025-10-12 20:12:29] 2025-10-13 00:11:54,455 | INFO     | mean y: 2186758.8835341367
[2025-10-12 20:12:29] 2025-10-13 00:11:54,455 | INFO     | -- intersect: 2106876433.1519833
[2025-10-12 20:12:29] 2025-10-13 00:11:54,455 | INFO     | intersect: 2106876433.1519833
[2025-10-12 20:12:29] 2025-10-13 00:11:54,455 | INFO     | chi2: 2.009978942454869
[2025-10-12 20:12:29] 2025-10-13 00:11:54,456 | INFO     | current chi2=2.009978942454869 (change=0.06293536080559248 %)
[2025-10-12 20:12:29] 2025-10-13 00:11:54,456 | INFO     | right removable region: 248
[2025-10-12 20:12:29] 2025-10-13 00:11:54,456 | INFO     | sum of square deviations: 5081827587.66925
[2025-10-12 20:12:29] 2025-10-13 00:11:54,457 | INFO     | sum of deviations: -58549043754.96062
[2025-10-12 20:12:29] 2025-10-13 00:11:54,457 | INFO     | mean x: 1760306568.1811023
[2025-10-12 20:12:29] 2025-10-13 00:11:54,458 | INFO     | mean y: 2197423.716535433
[2025-10-12 20:12:29] 2025-10-13 00:11:54,458 | INFO     | -- intersect: 20283142517.69398
[2025-10-12 20:12:29] 2025-10-13 00:11:54,458 | INFO     | intersect: 20283142517.69398
[2025-10-12 20:12:29] 2025-10-13 00:11:54,458 | INFO     | chi2: 1.1529450506468044
[2025-10-12 20:12:29] 2025-10-13 00:11:54,458 | INFO     | current chi2=1.1529450506468044 (change=58.519534869625645 %)
[2025-10-12 20:12:29] 2025-10-13 00:11:54,458 | INFO     | sum of square deviations: 4787564652.803196
[2025-10-12 20:12:29] 2025-10-13 00:11:54,460 | INFO     | sum of deviations: -57669607627.27312
[2025-10-12 20:12:29] 2025-10-13 00:11:54,460 | INFO     | mean x: 1760306720.6947792
[2025-10-12 20:12:29] 2025-10-13 00:11:54,460 | INFO     | mean y: 2196931.9437751006
[2025-10-12 20:12:29] 2025-10-13 00:11:54,460 | INFO     | -- intersect: 21206338337.466183
[2025-10-12 20:12:29] 2025-10-13 00:11:54,460 | INFO     | intersect: 21206338337.466183
[2025-10-12 20:12:29] 2025-10-13 00:11:54,460 | INFO     | chi2: 1.1089193974667926
[2025-10-12 20:12:29] 2025-10-13 00:11:54,460 | INFO     | current chi2=1.1089193974667926 (change=3.8185387200641836 %)
[2025-10-12 20:12:29] 2025-10-13 00:11:54,461 | INFO     | left removable region: 20
[2025-10-12 20:12:29] 2025-10-13 00:11:54,461 | INFO     | sum of square deviations: 3675670734.140358
[2025-10-12 20:12:29] 2025-10-13 00:11:54,462 | INFO     | sum of deviations: -20044693341.26315
[2025-10-12 20:12:29] 2025-10-13 00:11:54,462 | INFO     | mean x: 1760306690.2280703
[2025-10-12 20:12:29] 2025-10-13 00:11:54,462 | INFO     | mean y: 2193298.197368421
[2025-10-12 20:12:29] 2025-10-13 00:11:54,462 | INFO     | -- intersect: 9601749500.134415
[2025-10-12 20:12:29] 2025-10-13 00:11:54,462 | INFO     | intersect: 9601749500.134415
[2025-10-12 20:12:29] 2025-10-13 00:11:54,463 | INFO     | chi2: 0.20438033718272186
[2025-10-12 20:12:29] 2025-10-13 00:11:54,463 | INFO     | -- intersect: 9601749500.134415
[2025-10-12 20:12:29] 2025-10-13 00:11:54,463 | INFO     | current memory leak: -5.45 B/s (using 228 data points, chi2=0.20)
[2025-10-12 20:12:29] 2025-10-13 00:11:54,463 | INFO     | could have reported an average CPU frequency of 3288 MHz (12 samples)
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | ..............................
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | . Timing measurements:
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | . get job = 0 s
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | . initial setup = 3 s
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | . payload setup = 22 s
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | . stage-in = 0 s
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | . payload execution = 15761 s
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | . stage-out = 2 s
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | . log creation = 0 s
[2025-10-12 20:12:29] 2025-10-13 00:11:54,464 | INFO     | ..............................
[2025-10-12 20:12:29] 2025-10-13 00:11:54,985 | INFO     | time since job start (15840s) is within the limit (172800.0s)
[2025-10-12 20:12:29] 2025-10-13 00:11:55,007 | INFO     | 
[2025-10-12 20:12:29] 2025-10-13 00:11:55,007 | INFO     | job summary report
[2025-10-12 20:12:29] 2025-10-13 00:11:55,007 | INFO     | --------------------------------------------------
[2025-10-12 20:12:29] 2025-10-13 00:11:55,007 | INFO     | PanDA job id: 6839928895
[2025-10-12 20:12:29] 2025-10-13 00:11:55,007 | INFO     | task id: 46676269
[2025-10-12 20:12:29] 2025-10-13 00:11:55,007 | INFO     | errors: (none)
[2025-10-12 20:12:29] 2025-10-13 00:11:55,007 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | pilot state: finished 
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | transexitcode: 0
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | exeerrorcode: 0
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | exeerrordiag: 
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | exitcode: 0
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | exitmsg: OK
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | cpuconsumptiontime: 33093 s
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | nevents: 400
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | neventsw: 0
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | pid: 1085650
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | pgrp: 1085650
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | corecount: 9
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | event service: False
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 15: 2349175, 23: 2349203, 15787: 2380626, 15792: 2389624, 15794: 2389680, 15803: 2389874}
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | --------------------------------------------------
[2025-10-12 20:12:29] 2025-10-13 00:11:55,008 | INFO     | 
[2025-10-12 20:12:29] 2025-10-13 00:11:55,009 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 20:12:29] 2025-10-13 00:11:55,037 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:12:29] 2025-10-13 00:11:55,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:12:29] 2025-10-13 00:11:55,039 | INFO     | job 6839928895 has completed (purged errors)
[2025-10-12 20:12:29] 2025-10-13 00:11:55,039 | INFO     | overall cleanup function is called
[2025-10-12 20:12:29] 2025-10-13 00:11:56,052 | INFO     | --- collectZombieJob: --- 10, [1085650]
[2025-10-12 20:12:29] 2025-10-13 00:11:56,052 | INFO     | zombie collector waiting for pid 1085650
[2025-10-12 20:12:29] 2025-10-13 00:11:56,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:12:29] 2025-10-13 00:11:56,069 | INFO     | collected zombie processes
[2025-10-12 20:12:29] 2025-10-13 00:11:56,069 | INFO     | will attempt to kill all subprocesses of pid=1085650
[2025-10-12 20:12:29] 2025-10-13 00:11:57,650 | INFO     | PID=1078522 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 20:12:29] 2025-10-13 00:11:57,651 | INFO     | .. there are 25 such processes running
[2025-10-12 20:12:29] 2025-10-13 00:11:57,694 | INFO     | process IDs to be killed: [1085650] (in reverse order)
[2025-10-12 20:12:29] 2025-10-13 00:11:57,861 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:12:29] 2025-10-13 00:11:57,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:12:29] 2025-10-13 00:11:57,878 | INFO     | did not find any defunct processes belonging to 1085650
[2025-10-12 20:12:29] 2025-10-13 00:11:57,893 | INFO     | did not find any defunct processes belonging to 1085650
[2025-10-12 20:12:29] 2025-10-13 00:11:57,893 | INFO     | ready for new job
[2025-10-12 20:12:29] 2025-10-13 00:11:57,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:12:29] 2025-10-13 00:11:57,896 | INFO     | ***************************************
[2025-10-12 20:12:29] 2025-10-13 00:11:57,898 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:12:29] 2025-10-13 00:11:57,898 | INFO     | ***************************************
[2025-10-12 20:12:29] 2025-10-13 00:11:57,898 | INFO     | 
[2025-10-12 20:12:29] 2025-10-13 00:11:57,914 | INFO     | architecture information:
[2025-10-12 20:12:29] 2025-10-13 00:11:57,915 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:12:29] 2025-10-13 00:11:57,931 | INFO     | cat /etc/os-release:
[2025-10-12 20:12:29] NAME="CentOS Linux"
[2025-10-12 20:12:29] VERSION="7 (Core)"
[2025-10-12 20:12:29] ID="centos"
[2025-10-12 20:12:29] ID_LIKE="rhel fedora"
[2025-10-12 20:12:29] VERSION_ID="7"
[2025-10-12 20:12:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:12:29] ANSI_COLOR="0;31"
[2025-10-12 20:12:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:12:29] HOME_URL="https://www.centos.org/"
[2025-10-12 20:12:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:12:29] 
[2025-10-12 20:12:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:12:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:12:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:12:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:12:29] 
[2025-10-12 20:12:29] 2025-10-13 00:11:57,931 | INFO     | ***************************************
[2025-10-12 20:12:29] 2025-10-13 00:11:58,435 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 20:12:29] 2025-10-13 00:11:58,491 | INFO     | sufficient remaining disk space (85197848576 B)
[2025-10-12 20:12:29] 2025-10-13 00:11:58,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:12:29] 2025-10-13 00:11:58,492 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:12:29] 2025-10-13 00:11:58,492 | INFO     | update_server=False
[2025-10-12 20:12:29] 2025-10-13 00:11:58,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:12:29] 2025-10-13 00:11:58,492 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 20:12:29] 2025-10-13 00:11:58,493 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:12:29] 2025-10-13 00:11:58,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:12:29] 2025-10-13 00:11:58,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:12:29] 2025-10-13 00:11:58,676 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:12:29] 2025-10-13 00:11:58,676 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:12:29] 2025-10-13 00:11:58,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:12:29] 2025-10-13 00:11:58,676 | INFO     | will abort loop
[2025-10-12 20:12:29] 2025-10-13 00:11:58,867 | INFO     | all payload control threads have been joined
[2025-10-12 20:12:29] 2025-10-13 00:11:59,173 | INFO     | all data control threads have been joined
[2025-10-12 20:12:29] 2025-10-13 00:11:59,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:12:29] 2025-10-13 00:11:59,498 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:11:59,646 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:11:59,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:12:29] 2025-10-13 00:11:59,681 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:11:59,811 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:11:59,870 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:11:59,873 | INFO     | [payload] control thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:11:59,876 | INFO     | all job control threads have been joined
[2025-10-12 20:12:29] 2025-10-13 00:12:00,044 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:00,178 | INFO     | [data] control thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:00,222 | INFO     | [job] validate thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:00,359 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:00,479 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:00,654 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:00,781 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:00,882 | INFO     | [job] control thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:01,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:12:29] 2025-10-13 00:12:01,401 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:05,252 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:12:29] 2025-10-13 00:12:21,823 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:12:29] 2025-10-13 00:12:23,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883961001792)>', '<ExcThread(monitor, started 139883175728896)>']
[2025-10-12 20:12:29] 2025-10-13 00:12:24,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:12:29] 2025-10-13 00:12:24,653 | INFO     | [monitor] control thread has ended
[2025-10-12 20:12:29] 2025-10-13 00:12:28,705 | INFO     | all workflow threads have been joined
[2025-10-12 20:12:29] 2025-10-13 00:12:28,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:12:29] 2025-10-13 00:12:28,706 | INFO     | traces error code: 0
[2025-10-12 20:12:29] 2025-10-13 00:12:28,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:12:29] 2025-10-13 00:12:28,853 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:12:29] 2025-10-13 00:12:28,856 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:12:29] 2025-10-13 00:12:28,858 [wrapper] pilotpid: 1078522
[2025-10-12 20:12:29] 2025-10-13 00:12:28,860 [wrapper] Pilot exit status: 0
[2025-10-12 20:12:29] 2025-10-13 00:12:28,913 [wrapper] pandaids: 6839928895
[2025-10-12 20:12:29] 2025-10-13 00:12:28,999 [wrapper] cleanup supervisor_pilot 1895283 1078523
[2025-10-12 20:12:29] 2025-10-13 00:12:29,003 [wrapper] Test setup, not cleaning
[2025-10-12 20:12:29] 2025-10-13 00:12:29,006 [wrapper] apfmon messages muted
[2025-10-12 20:12:29] 2025-10-13 00:12:29,010 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:12:29] 2025-10-13 00:12:29,015 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:12:29]  *** Error codes and diagnostics ***
[2025-10-12 20:12:29]     "exeErrorCode": 0,
[2025-10-12 20:12:29]     "exeErrorDiag": "",
[2025-10-12 20:12:29]     "pilotErrorCode": 0,
[2025-10-12 20:12:29]     "pilotErrorDiag": "",
[2025-10-12 20:12:29]  *** Listing of results directory ***
[2025-10-12 20:12:29] total 423740
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 08:10 pilot3.tar.gz
[2025-10-12 20:12:29] -rwx------. 1 boincer umatlas     36292 Oct 12 08:21 runpilot2-wrapper.sh
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:21 queuedata.json
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:12:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:47 run_atlas
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:47 job.xml
[2025-10-12 20:12:29] -rw-r--r--. 2 boincer umatlas 224191169 Oct 12 15:47 EVNT.46676267._003760.pool.root.1
[2025-10-12 20:12:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:47 start_atlas.sh
[2025-10-12 20:12:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:47 shared
[2025-10-12 20:12:29] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 15:47 input.tar.gz
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:47 boinc_lockfile
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 15:47 pandaJob.out
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas    975536 Oct 12 15:47 agis_schedconf.cvmfs.json
[2025-10-12 20:12:29] drwx------. 5 boincer umatlas      4096 Oct 12 15:47 pilot3
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas        95 Oct 12 20:11 pilot_heartbeat.json
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas 201015598 Oct 12 20:11 HITS.46676269._078032.pool.root.1
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas       531 Oct 12 20:11 boinc_task_state.xml
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas      1042 Oct 12 20:11 memory_monitor_summary.json
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas    474925 Oct 12 20:11 log.46676269._078032.job.log.tgz.1
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas      7801 Oct 12 20:11 heartbeat.json
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas      6898 Oct 12 20:12 init_data.xml
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas        28 Oct 12 20:12 wrapper_checkpoint.txt
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:12 boinc_mmap_file
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas      4738 Oct 12 20:12 pilotlog.txt
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas   1926615 Oct 12 20:12 log.46676269._078032.job.log.1
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas       357 Oct 12 20:12 output.list
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:12 runtime_log
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas   2416640 Oct 12 20:12 result.tar.gz
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 20:12 runtime_log.err
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas       658 Oct 12 20:12 pbhNDmzFAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3kjNDmlAlNnn.diag
[2025-10-12 20:12:29] -rw-r--r--. 1 boincer umatlas     21103 Oct 12 20:12 stderr.txt
[2025-10-12 20:12:29] HITS file was successfully produced:
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas 201015598 Oct 12 20:11 shared/HITS.pool.root.1
[2025-10-12 20:12:29]  *** Contents of shared directory: ***
[2025-10-12 20:12:29] total 418188
[2025-10-12 20:12:29] -rw-r--r--. 2 boincer umatlas 224191169 Oct 12 15:47 ATLAS.root_0
[2025-10-12 20:12:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:47 start_atlas.sh
[2025-10-12 20:12:29] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 15:47 input.tar.gz
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas 201015598 Oct 12 20:11 HITS.pool.root.1
[2025-10-12 20:12:29] -rw-------. 1 boincer umatlas   2416640 Oct 12 20:12 result.tar.gz
20:12:30 (1074159): run_atlas exited; CPU time 33349.199698
20:12:30 (1074159): called boinc_finish(0)

</stderr_txt>
]]>

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