Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:25:06 (3730425): wrapper (7.7.26015): starting
13:25:06 (3730425): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:25:06] Arguments: --nthreads 8
[2025-10-12 13:25:06] Threads: 8
[2025-10-12 13:25:06] Checking for CVMFS
[2025-10-12 13:25:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:25:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:25:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:25:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:25:08] 2.13.2.0 2356181 129559 271772 151629 0 465 28865468 32935937 25181 16776704 0 122838259 99.727 92506769 30478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 13:25:08] CVMFS is ok
[2025-10-12 13:25:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:25:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:25:08] Further information can be found at the LHC@home message board.
[2025-10-12 13:25:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:25:08] Checking for apptainer binary...
[2025-10-12 13:25:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:25:08] Running /usr/bin/apptainer --version
[2025-10-12 13:25:08] apptainer version 1.4.3-1.el9
[2025-10-12 13:25:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:25:09] c-6-2.aglt2.org
[2025-10-12 13:25:09] apptainer works
[2025-10-12 13:25:09] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:25:09] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:25:09] Starting ATLAS job with PandaID=6840225969
[2025-10-12 13:25:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:32:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:32:22] 2025-10-12 22:31:25,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:32:22] 2025-10-12 22:31:25,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:32:22] 2025-10-12 22:31:25,606 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:32:22] 2025-10-12 22:31:25,607 | INFO     | sum of square deviations: 8288555731.946475
[2025-10-12 18:32:22] 2025-10-12 22:31:25,609 | INFO     | sum of deviations: 79025228978.84958
[2025-10-12 18:32:22] 2025-10-12 22:31:25,610 | INFO     | mean x: 1760299126.5518394
[2025-10-12 18:32:22] 2025-10-12 22:31:25,610 | INFO     | mean y: 2101341.364548495
[2025-10-12 18:32:22] 2025-10-12 22:31:25,610 | INFO     | -- intersect: -16781044727.240103
[2025-10-12 18:32:22] 2025-10-12 22:31:25,610 | INFO     | intersect: -16781044727.240103
[2025-10-12 18:32:22] 2025-10-12 22:31:25,611 | INFO     | chi2: 2.2452092028062696
[2025-10-12 18:32:22] 2025-10-12 22:31:25,611 | INFO     | sum of square deviations: 7879696062.897993
[2025-10-12 18:32:22] 2025-10-12 22:31:25,614 | INFO     | sum of deviations: 77864091419.34702
[2025-10-12 18:32:22] 2025-10-12 22:31:25,614 | INFO     | mean x: 1760298974.0612245
[2025-10-12 18:32:22] 2025-10-12 22:31:25,614 | INFO     | mean y: 2100913.425170068
[2025-10-12 18:32:22] 2025-10-12 22:31:25,614 | INFO     | -- intersect: -17392488820.442883
[2025-10-12 18:32:22] 2025-10-12 22:31:25,615 | INFO     | intersect: -17392488820.442883
[2025-10-12 18:32:22] 2025-10-12 22:31:25,615 | INFO     | chi2: 2.239804608777905
[2025-10-12 18:32:22] 2025-10-12 22:31:25,615 | INFO     | current chi2=2.239804608777905 (change=0.240716723484365 %)
[2025-10-12 18:32:22] 2025-10-12 22:31:25,615 | INFO     | right removable region: 293
[2025-10-12 18:32:22] 2025-10-12 22:31:25,616 | INFO     | sum of square deviations: 7879595412.897993
[2025-10-12 18:32:22] 2025-10-12 22:31:25,633 | INFO     | sum of deviations: 24328256343.30612
[2025-10-12 18:32:22] 2025-10-12 22:31:25,633 | INFO     | mean x: 1760299279.0612245
[2025-10-12 18:32:22] 2025-10-12 22:31:25,633 | INFO     | mean y: 2121660.482993197
[2025-10-12 18:32:22] 2025-10-12 22:31:25,633 | INFO     | -- intersect: -5432803593.653634
[2025-10-12 18:32:22] 2025-10-12 22:31:25,633 | INFO     | intersect: -5432803593.653634
[2025-10-12 18:32:22] 2025-10-12 22:31:25,634 | INFO     | chi2: 0.27752273251234405
[2025-10-12 18:32:22] 2025-10-12 22:31:25,634 | INFO     | current chi2=0.27752273251234405 (change=87.63933747619285 %)
[2025-10-12 18:32:22] 2025-10-12 22:31:25,634 | INFO     | sum of square deviations: 7484380769.307916
[2025-10-12 18:32:22] 2025-10-12 22:31:25,653 | INFO     | sum of deviations: 16478543818.858135
[2025-10-12 18:32:22] 2025-10-12 22:31:25,653 | INFO     | mean x: 1760299431.5570934
[2025-10-12 18:32:22] 2025-10-12 22:31:25,653 | INFO     | mean y: 2124651.069204152
[2025-10-12 18:32:22] 2025-10-12 22:31:25,653 | INFO     | -- intersect: -3873569572.8507977
[2025-10-12 18:32:22] 2025-10-12 22:31:25,654 | INFO     | intersect: -3873569572.8507977
[2025-10-12 18:32:22] 2025-10-12 22:31:25,654 | INFO     | chi2: 0.18512350544357545
[2025-10-12 18:32:22] 2025-10-12 22:31:25,654 | INFO     | current chi2=0.18512350544357545 (change=33.29429132968728 %)
[2025-10-12 18:32:22] 2025-10-12 22:31:25,655 | INFO     | sum of square deviations: 7102644106.404918
[2025-10-12 18:32:22] 2025-10-12 22:31:25,674 | INFO     | sum of deviations: 19487590765.85916
[2025-10-12 18:32:22] 2025-10-12 22:31:25,674 | INFO     | mean x: 1760299584.0457747
[2025-10-12 18:32:22] 2025-10-12 22:31:25,675 | INFO     | mean y: 2123447.5492957747
[2025-10-12 18:32:22] 2025-10-12 22:31:25,675 | INFO     | -- intersect: -4827626910.949169
[2025-10-12 18:32:22] 2025-10-12 22:31:25,675 | INFO     | intersect: -4827626910.949169
[2025-10-12 18:32:22] 2025-10-12 22:31:25,675 | INFO     | chi2: 0.1753400467572913
[2025-10-12 18:32:22] 2025-10-12 22:31:25,675 | INFO     | current chi2=0.1753400467572913 (change=5.284827911421586 %)
[2025-10-12 18:32:22] 2025-10-12 22:31:25,676 | INFO     | left removable region: 30
[2025-10-12 18:32:22] 2025-10-12 22:31:25,676 | INFO     | sum of square deviations: 5640810297.536121
[2025-10-12 18:32:22] 2025-10-12 22:31:25,684 | INFO     | sum of deviations: 24060243912.699627
[2025-10-12 18:32:22] 2025-10-12 22:31:25,685 | INFO     | mean x: 1760299858.528517
[2025-10-12 18:32:22] 2025-10-12 22:31:25,685 | INFO     | mean y: 2122168.9733840306
[2025-10-12 18:32:22] 2025-10-12 22:31:25,685 | INFO     | -- intersect: -7506239524.059699
[2025-10-12 18:32:22] 2025-10-12 22:31:25,685 | INFO     | intersect: -7506239524.059699
[2025-10-12 18:32:22] 2025-10-12 22:31:25,685 | INFO     | chi2: 0.12762609474379208
[2025-10-12 18:32:22] 2025-10-12 22:31:25,686 | INFO     | -- intersect: -7506239524.059699
[2025-10-12 18:32:22] 2025-10-12 22:31:25,686 | INFO     | current memory leak: 4.27 B/s (using 263 data points, chi2=0.13)
[2025-10-12 18:32:22] 2025-10-12 22:31:25,686 | INFO     | could have reported an average CPU frequency of 2600 MHz (13 samples)
[2025-10-12 18:32:22] 2025-10-12 22:31:25,687 | INFO     | ..............................
[2025-10-12 18:32:22] 2025-10-12 22:31:25,687 | INFO     | . Timing measurements:
[2025-10-12 18:32:22] 2025-10-12 22:31:25,687 | INFO     | . get job = 0 s
[2025-10-12 18:32:22] 2025-10-12 22:31:25,687 | INFO     | . initial setup = 5 s
[2025-10-12 18:32:22] 2025-10-12 22:31:25,687 | INFO     | . payload setup = 24 s
[2025-10-12 18:32:22] 2025-10-12 22:31:25,687 | INFO     | . stage-in = 0 s
[2025-10-12 18:32:22] 2025-10-12 22:31:25,687 | INFO     | . payload execution = 18244 s
[2025-10-12 18:32:22] 2025-10-12 22:31:25,687 | INFO     | . stage-out = 3 s
[2025-10-12 18:32:22] 2025-10-12 22:31:25,704 | INFO     | . log creation = 0 s
[2025-10-12 18:32:22] 2025-10-12 22:31:25,704 | INFO     | ..............................
[2025-10-12 18:32:22] 2025-10-12 22:31:26,037 | INFO     | 
[2025-10-12 18:32:22] 2025-10-12 22:31:26,037 | INFO     | job summary report
[2025-10-12 18:32:22] 2025-10-12 22:31:26,037 | INFO     | --------------------------------------------------
[2025-10-12 18:32:22] 2025-10-12 22:31:26,037 | INFO     | PanDA job id: 6840225969
[2025-10-12 18:32:22] 2025-10-12 22:31:26,037 | INFO     | task id: 46676269
[2025-10-12 18:32:22] 2025-10-12 22:31:26,037 | INFO     | errors: (none)
[2025-10-12 18:32:22] 2025-10-12 22:31:26,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | pilot state: finished 
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | transexitcode: 0
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | exeerrorcode: 0
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | exeerrordiag: 
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | exitcode: 0
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | exitmsg: OK
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | cpuconsumptiontime: 49146 s
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | nevents: 400
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | neventsw: 0
[2025-10-12 18:32:22] 2025-10-12 22:31:26,038 | INFO     | pid: 3747055
[2025-10-12 18:32:22] 2025-10-12 22:31:26,039 | INFO     | pgrp: 3747055
[2025-10-12 18:32:22] 2025-10-12 22:31:26,039 | INFO     | corecount: 8
[2025-10-12 18:32:22] 2025-10-12 22:31:26,039 | INFO     | event service: False
[2025-10-12 18:32:22] 2025-10-12 22:31:26,039 | INFO     | sizes: {0: 2348685, 1: 2348884, 13: 2348884, 24: 2349202, 35: 2349230, 18272: 2381444, 18273: 2381571, 18278: 2390681, 18294: 2390819}
[2025-10-12 18:32:22] 2025-10-12 22:31:26,039 | INFO     | --------------------------------------------------
[2025-10-12 18:32:22] 2025-10-12 22:31:26,039 | INFO     | 
[2025-10-12 18:32:22] 2025-10-12 22:31:26,039 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 18:32:22] 2025-10-12 22:31:26,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:32:22] 2025-10-12 22:31:26,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:32:22] 2025-10-12 22:31:26,071 | INFO     | job 6840225969 has completed (purged errors)
[2025-10-12 18:32:22] 2025-10-12 22:31:26,071 | INFO     | overall cleanup function is called
[2025-10-12 18:32:22] 2025-10-12 22:31:27,080 | INFO     | --- collectZombieJob: --- 10, [3747055]
[2025-10-12 18:32:22] 2025-10-12 22:31:27,081 | INFO     | zombie collector waiting for pid 3747055
[2025-10-12 18:32:22] 2025-10-12 22:31:27,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:32:22] 2025-10-12 22:31:27,081 | INFO     | collected zombie processes
[2025-10-12 18:32:22] 2025-10-12 22:31:27,081 | INFO     | will attempt to kill all subprocesses of pid=3747055
[2025-10-12 18:32:22] 2025-10-12 22:31:27,603 | INFO     | process IDs to be killed: [3747055] (in reverse order)
[2025-10-12 18:32:22] 2025-10-12 22:31:27,759 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:32:22] 2025-10-12 22:31:27,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:32:22] 2025-10-12 22:31:27,789 | INFO     | did not find any defunct processes belonging to 3747055
[2025-10-12 18:32:22] 2025-10-12 22:31:27,805 | INFO     | did not find any defunct processes belonging to 3747055
[2025-10-12 18:32:22] 2025-10-12 22:31:27,806 | INFO     | ready for new job
[2025-10-12 18:32:22] 2025-10-12 22:31:27,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:32:22] 2025-10-12 22:31:27,808 | INFO     | ***************************************
[2025-10-12 18:32:22] 2025-10-12 22:31:27,808 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:32:22] 2025-10-12 22:31:27,808 | INFO     | ***************************************
[2025-10-12 18:32:22] 2025-10-12 22:31:27,808 | INFO     | 
[2025-10-12 18:32:22] 2025-10-12 22:31:27,835 | INFO     | architecture information:
[2025-10-12 18:32:22] 2025-10-12 22:31:27,845 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:32:22] 2025-10-12 22:31:27,890 | INFO     | cat /etc/os-release:
[2025-10-12 18:32:22] NAME="CentOS Linux"
[2025-10-12 18:32:22] VERSION="7 (Core)"
[2025-10-12 18:32:22] ID="centos"
[2025-10-12 18:32:22] ID_LIKE="rhel fedora"
[2025-10-12 18:32:22] VERSION_ID="7"
[2025-10-12 18:32:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:32:22] ANSI_COLOR="0;31"
[2025-10-12 18:32:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:32:22] HOME_URL="https://www.centos.org/"
[2025-10-12 18:32:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:32:22] 
[2025-10-12 18:32:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:32:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:32:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:32:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:32:22] 
[2025-10-12 18:32:22] 2025-10-12 22:31:27,890 | INFO     | ***************************************
[2025-10-12 18:32:22] 2025-10-12 22:31:28,394 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 18:32:22] 2025-10-12 22:31:28,558 | INFO     | sufficient remaining disk space (75725012992 B)
[2025-10-12 18:32:22] 2025-10-12 22:31:28,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:32:22] 2025-10-12 22:31:28,558 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:32:22] 2025-10-12 22:31:28,559 | INFO     | update_server=False
[2025-10-12 18:32:22] 2025-10-12 22:31:28,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:32:22] 2025-10-12 22:31:28,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:32:22] 2025-10-12 22:31:28,966 | INFO     | all data control threads have been joined
[2025-10-12 18:32:22] 2025-10-12 22:31:28,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:32:22] 2025-10-12 22:31:28,979 | INFO     | aborting loop
[2025-10-12 18:32:22] 2025-10-12 22:31:28,983 | INFO     | all payload control threads have been joined
[2025-10-12 18:32:22] 2025-10-12 22:31:29,480 | INFO     | all job control threads have been joined
[2025-10-12 18:32:22] 2025-10-12 22:31:29,581 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:29,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:32:22] 2025-10-12 22:31:29,972 | INFO     | [data] control thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:29,984 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:29,984 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:29,990 | INFO     | [payload] control thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:30,142 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:30,418 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:30,488 | INFO     | [job] control thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:30,575 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:30,629 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:30,733 | INFO     | [job] validate thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:30,950 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:30,987 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:31,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:32:22] 2025-10-12 22:31:32,073 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:33,596 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:38,783 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:32:22] 2025-10-12 22:31:39,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:32:22] 2025-10-12 22:31:59,758 | INFO     | PID=3734558 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:32:22] 2025-10-12 22:31:59,759 | INFO     | .. there are 29 such processes running
[2025-10-12 18:32:22] 2025-10-12 22:31:59,760 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:32:22] 2025-10-12 22:31:59,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:32:22] 2025-10-12 22:31:59,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:32:22] 2025-10-12 22:32:14,969 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:32:22] 2025-10-12 22:32:15,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713814337344)>', '<ExcThread(monitor, started 140713035548416)>']
[2025-10-12 18:32:22] 2025-10-12 22:32:16,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:32:22] 2025-10-12 22:32:16,919 | INFO     | [monitor] control thread has ended
[2025-10-12 18:32:22] 2025-10-12 22:32:21,008 | INFO     | all workflow threads have been joined
[2025-10-12 18:32:22] 2025-10-12 22:32:21,012 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:32:22] 2025-10-12 22:32:21,013 | INFO     | traces error code: 0
[2025-10-12 18:32:22] 2025-10-12 22:32:21,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:32:22] 2025-10-12 22:32:21,478 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:32:22] 2025-10-12 22:32:21,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:32:22] 2025-10-12 22:32:21,538 [wrapper] pilotpid: 3734558
[2025-10-12 18:32:22] 2025-10-12 22:32:21,544 [wrapper] Pilot exit status: 0
[2025-10-12 18:32:22] 2025-10-12 22:32:21,605 [wrapper] pandaids: 6840225969
[2025-10-12 18:32:22] 2025-10-12 22:32:21,735 [wrapper] cleanup supervisor_pilot  472010 3734559
[2025-10-12 18:32:22] 2025-10-12 22:32:21,739 [wrapper] Test setup, not cleaning
[2025-10-12 18:32:22] 2025-10-12 22:32:21,742 [wrapper] apfmon messages muted
[2025-10-12 18:32:22] 2025-10-12 22:32:21,744 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:32:22] 2025-10-12 22:32:21,759 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:32:22]  *** Error codes and diagnostics ***
[2025-10-12 18:32:22]     "exeErrorCode": 0,
[2025-10-12 18:32:22]     "exeErrorDiag": "",
[2025-10-12 18:32:22]     "pilotErrorCode": 0,
[2025-10-12 18:32:22]     "pilotErrorDiag": "",
[2025-10-12 18:32:22]  *** Listing of results directory ***
[2025-10-12 18:32:22] total 418324
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 12:01 pilot3.tar.gz
[2025-10-12 18:32:22] -rwx------. 1 boincer umatlas     36292 Oct 12 12:02 runpilot2-wrapper.sh
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 12:02 queuedata.json
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:32:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:25 run_atlas
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:25 job.xml
[2025-10-12 18:32:22] -rw-r--r--. 2 boincer umatlas 224357340 Oct 12 13:25 EVNT.46676267._004602.pool.root.1
[2025-10-12 18:32:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:25 start_atlas.sh
[2025-10-12 18:32:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:25 shared
[2025-10-12 18:32:22] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 13:25 input.tar.gz
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:25 boinc_lockfile
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 13:25 pandaJob.out
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas    975528 Oct 12 13:25 agis_schedconf.cvmfs.json
[2025-10-12 18:32:22] drwx------. 5 boincer umatlas      4096 Oct 12 13:25 pilot3
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas 194592517 Oct 12 18:30 HITS.46676269._083009.pool.root.1
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas       531 Oct 12 18:30 boinc_task_state.xml
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas      1054 Oct 12 18:31 memory_monitor_summary.json
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas    514381 Oct 12 18:31 log.46676269._083009.job.log.tgz.1
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas      7816 Oct 12 18:31 heartbeat.json
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas      6656 Oct 12 18:31 init_data.xml
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas        95 Oct 12 18:31 pilot_heartbeat.json
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas        28 Oct 12 18:32 wrapper_checkpoint.txt
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:32 boinc_mmap_file
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas      4896 Oct 12 18:32 pilotlog.txt
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas   2241466 Oct 12 18:32 log.46676269._083009.job.log.1
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas       357 Oct 12 18:32 output.list
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:32 runtime_log
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas   2775040 Oct 12 18:32 result.tar.gz
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 18:32 runtime_log.err
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas       655 Oct 12 18:32 BZPLDmUhDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7MUMDmYrRxxn.diag
[2025-10-12 18:32:22] -rw-r--r--. 1 boincer umatlas     20997 Oct 12 18:32 stderr.txt
[2025-10-12 18:32:22] HITS file was successfully produced:
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas 194592517 Oct 12 18:30 shared/HITS.pool.root.1
[2025-10-12 18:32:22]  *** Contents of shared directory: ***
[2025-10-12 18:32:22] total 412424
[2025-10-12 18:32:22] -rw-r--r--. 2 boincer umatlas 224357340 Oct 12 13:25 ATLAS.root_0
[2025-10-12 18:32:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:25 start_atlas.sh
[2025-10-12 18:32:22] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 13:25 input.tar.gz
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas 194592517 Oct 12 18:30 HITS.pool.root.1
[2025-10-12 18:32:22] -rw-------. 1 boincer umatlas   2775040 Oct 12 18:32 result.tar.gz
18:32:24 (3730425): run_atlas exited; CPU time 49693.867316
18:32:24 (3730425): called boinc_finish(0)

</stderr_txt>
]]>

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