Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:46:36 (540811): wrapper (7.7.26015): starting
10:46:36 (540811): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 10:46:36] Arguments: --nthreads 12
[2025-10-12 10:46:36] Threads: 12
[2025-10-12 10:46:36] Checking for CVMFS
[2025-10-12 10:46:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:46:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:46:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:46:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:46:37] 2.11.5.0 2461 31445 218588 151629 1 219 28244465 45568001 11033 130560 0 313941956 99.868 126075118 11871 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 10:46:37] CVMFS is ok
[2025-10-12 10:46:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:46:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:46:37] Further information can be found at the LHC@home message board.
[2025-10-12 10:46:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:46:37] Checking for apptainer binary...
[2025-10-12 10:46:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:46:37] Running /usr/bin/apptainer --version
[2025-10-12 10:46:37] apptainer version 1.4.1-1.el9
[2025-10-12 10:46:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:46:38] wns0083.triumf.lcg
[2025-10-12 10:46:38] apptainer works
[2025-10-12 10:46:38] Set ATHENA_PROC_NUMBER=12
[2025-10-12 10:46:38] Set ATHENA_CORE_NUMBER=12
[2025-10-12 10:46:38] Starting ATLAS job with PandaID=6840181780
[2025-10-12 10:46:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:51:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:51:11] 2025-10-12 17:50:36,926 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:51:11] 2025-10-12 17:50:36,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:51:11] 2025-10-12 17:50:36,926 | WARNING  | wrong length of table data, x=[1760291282.0], y=[676.0] (must be same and length>=4)
[2025-10-12 10:51:11] 2025-10-12 17:50:36,927 | INFO     | could have reported an average CPU frequency of 2483 MHz (4 samples)
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | ..............................
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . Timing measurements:
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . get job = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . initial setup = 3 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . payload setup = 13 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . stage-in = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . payload execution = 34 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | . stage-out = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | . log creation = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | ..............................
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840181780/pilotlog.txt
[2025-10-12 10:51:11] 2025-10-12 17:50:36,960 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 10:51:11] - Log from pilotlog.txt -
[2025-10-12 10:51:11] 2025-10-12 17:50:36,925 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840181780/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:51:11] 2025-10-12 17:50:36,925 | INFO     | extracted standard info from prmon json
[2025-10-12 10:51:11] 2025-10-12 17:50:36,925 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:51:11] 2025-10-12 17:50:36,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:51:11] 2025-10-12 17:50:36,926 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:51:11] 2025-10-12 17:50:36,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:51:11] 2025-10-12 17:50:36,926 | WARNING  | wrong length of table data, x=[1760291282.0], y=[676.0] (must be same and length>=4)
[2025-10-12 10:51:11] 2025-10-12 17:50:36,927 | INFO     | could have reported an average CPU frequency of 2483 MHz (4 samples)
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | ..............................
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . Timing measurements:
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . get job = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . initial setup = 3 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . payload setup = 13 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . stage-in = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . payload execution = 34 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | . stage-out = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | . log creation = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | ..............................
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840181780/pilotlog.txt
[2025-10-12 10:51:11] 2025-10-12 17:50:36,960 | WARNING  | 
[2025-10-12 10:51:11] [begin log extracts]
[2025-10-12 10:51:11] - Log from pilotlog.txt -
[2025-10-12 10:51:11] 2025-10-12 17:50:36,925 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840181780/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:51:11] 2025-10-12 17:50:36,925 | INFO     | extracted standard info from prmon json
[2025-10-12 10:51:11] 2025-10-12 17:50:36,925 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:51:11] 2025-10-12 17:50:36,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:51:11] 2025-10-12 17:50:36,926 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:51:11] 2025-10-12 17:50:36,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:51:11] 2025-10-12 17:50:36,926 | WARNING  | wrong length of table data, x=[1760291282.0], y=[676.0] (must be same and length>=4)
[2025-10-12 10:51:11] 2025-10-12 17:50:36,927 | INFO     | could have reported an average CPU frequency of 2483 MHz (4 samples)
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | ..............................
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . Timing measurements:
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . get job = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . initial setup = 3 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . payload setup = 13 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . stage-in = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,929 | INFO     | . payload execution = 34 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | . stage-out = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | . log creation = 0 s
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | ..............................
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 10:51:11] 2025-10-12 17:50:36,930 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840181780/pilotlog.txt
[2025-10-12 10:51:11] [end log extracts]
[2025-10-12 10:51:11] 2025-10-12 17:50:36,961 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 10:51:11] 2025-10-12 17:50:36,961 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 10:51:11] 2025-10-12 17:50:37,108 | INFO     | time since job start (216s) is within the limit (172800.0s)
[2025-10-12 10:51:11] 2025-10-12 17:50:37,154 | INFO     | 
[2025-10-12 10:51:11] 2025-10-12 17:50:37,154 | INFO     | job summary report
[2025-10-12 10:51:11] 2025-10-12 17:50:37,155 | INFO     | --------------------------------------------------
[2025-10-12 10:51:11] 2025-10-12 17:50:37,155 | INFO     | PanDA job id: 6840181780
[2025-10-12 10:51:11] 2025-10-12 17:50:37,155 | INFO     | task id: 46676269
[2025-10-12 10:51:11] 2025-10-12 17:50:37,155 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 10:48:19,425 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 10:51:11] 2025-10-12 17:50:37,155 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:51:11] 2025-10-12 17:50:37,155 | INFO     | pilot state: failed 
[2025-10-12 10:51:11] 2025-10-12 17:50:37,155 | INFO     | transexitcode: 65
[2025-10-12 10:51:11] 2025-10-12 17:50:37,155 | INFO     | exeerrorcode: 65
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | exitcode: 65
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | nevents: 0
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | neventsw: 0
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | pid: 553018
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | pgrp: 553018
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | corecount: 12
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | event service: False
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | sizes: {0: 2348854, 1: 2348854, 11: 2349172, 22: 2349172, 52: 2372489, 53: 2376781, 54: 2376937, 182: 2377103}
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | --------------------------------------------------
[2025-10-12 10:51:11] 2025-10-12 17:50:37,156 | INFO     | 
[2025-10-12 10:51:11] 2025-10-12 17:50:37,157 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 10:51:11] 2025-10-12 17:50:37,200 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:51:11] 2025-10-12 17:50:37,201 | INFO     | job 6840181780 has completed (purged errors)
[2025-10-12 10:51:11] 2025-10-12 17:50:37,202 | INFO     | overall cleanup function is called
[2025-10-12 10:51:11] 2025-10-12 17:50:38,211 | INFO     | --- collectZombieJob: --- 10, [553018]
[2025-10-12 10:51:11] 2025-10-12 17:50:38,212 | INFO     | zombie collector waiting for pid 553018
[2025-10-12 10:51:11] 2025-10-12 17:50:38,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:51:11] 2025-10-12 17:50:38,212 | INFO     | collected zombie processes
[2025-10-12 10:51:11] 2025-10-12 17:50:38,212 | INFO     | will attempt to kill all subprocesses of pid=553018
[2025-10-12 10:51:11] 2025-10-12 17:50:38,486 | INFO     | process IDs to be killed: [553018] (in reverse order)
[2025-10-12 10:51:11] 2025-10-12 17:50:38,643 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:51:11] 2025-10-12 17:50:38,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:51:11] 2025-10-12 17:50:38,653 | INFO     | did not find any defunct processes belonging to 553018
[2025-10-12 10:51:11] 2025-10-12 17:50:38,662 | INFO     | did not find any defunct processes belonging to 553018
[2025-10-12 10:51:11] 2025-10-12 17:50:38,662 | INFO     | ready for new job
[2025-10-12 10:51:11] 2025-10-12 17:50:38,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:51:11] 2025-10-12 17:50:38,663 | INFO     | ***************************************
[2025-10-12 10:51:11] 2025-10-12 17:50:38,664 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:51:11] 2025-10-12 17:50:38,664 | INFO     | ***************************************
[2025-10-12 10:51:11] 2025-10-12 17:50:38,664 | INFO     | 
[2025-10-12 10:51:11] 2025-10-12 17:50:38,669 | INFO     | architecture information:
[2025-10-12 10:51:11] 2025-10-12 17:50:38,674 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:51:11] 2025-10-12 17:50:38,702 | INFO     | cat /etc/os-release:
[2025-10-12 10:51:11] NAME="CentOS Linux"
[2025-10-12 10:51:11] VERSION="7 (Core)"
[2025-10-12 10:51:11] ID="centos"
[2025-10-12 10:51:11] ID_LIKE="rhel fedora"
[2025-10-12 10:51:11] VERSION_ID="7"
[2025-10-12 10:51:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:51:11] ANSI_COLOR="0;31"
[2025-10-12 10:51:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:51:11] HOME_URL="https://www.centos.org/"
[2025-10-12 10:51:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:51:11] 
[2025-10-12 10:51:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:51:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:51:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:51:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:51:11] 
[2025-10-12 10:51:11] 2025-10-12 17:50:38,703 | INFO     | ***************************************
[2025-10-12 10:51:11] 2025-10-12 17:50:39,205 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 10:51:11] 2025-10-12 17:50:39,228 | INFO     | sufficient remaining disk space (2084809211904 B)
[2025-10-12 10:51:11] 2025-10-12 17:50:39,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:51:11] 2025-10-12 17:50:39,229 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:51:11] 2025-10-12 17:50:39,229 | INFO     | update_server=False
[2025-10-12 10:51:11] 2025-10-12 17:50:39,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:51:11] 2025-10-12 17:50:39,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:51:11] 2025-10-12 17:50:39,230 | INFO     | aborting loop
[2025-10-12 10:51:11] 2025-10-12 17:50:39,277 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:51:11] 2025-10-12 17:50:39,309 | INFO     | all payload control threads have been joined
[2025-10-12 10:51:11] 2025-10-12 17:50:40,198 | INFO     | all data control threads have been joined
[2025-10-12 10:51:11] 2025-10-12 17:50:40,235 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:40,236 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:40,250 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:40,293 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:40,315 | INFO     | [payload] control thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:40,464 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:40,533 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:40,674 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:40,889 | INFO     | all job control threads have been joined
[2025-10-12 10:51:11] 2025-10-12 17:50:41,204 | INFO     | [data] control thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:41,285 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:41,451 | INFO     | [job] validate thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:41,514 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:41,667 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:41,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:51:11] 2025-10-12 17:50:41,896 | INFO     | [job] control thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:42,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:51:11] 2025-10-12 17:50:43,122 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:50:45,764 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:51:11] 2025-10-12 17:51:01,545 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:51:11] 2025-10-12 17:51:02,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919453128512)>', '<ExcThread(monitor, started 139918676317952)>']
[2025-10-12 10:51:11] 2025-10-12 17:51:07,042 | INFO     | all workflow threads have been joined
[2025-10-12 10:51:11] 2025-10-12 17:51:07,043 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:51:11] 2025-10-12 17:51:07,043 | INFO     | traces error code: 0
[2025-10-12 10:51:11] 2025-10-12 17:51:07,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:51:11] 2025-10-12 17:51:10,513 | INFO     | PID=544679 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 10:51:11] 2025-10-12 17:51:10,513 | INFO     | .. there are 28 such processes running
[2025-10-12 10:51:11] 2025-10-12 17:51:10,514 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:51:11] 2025-10-12 17:51:10,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:51:11] 2025-10-12 17:51:10,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:51:11] 2025-10-12 17:51:10,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:51:11] 2025-10-12 17:51:10,514 | INFO     | [monitor] control thread has ended
[2025-10-12 10:51:11] 2025-10-12 17:51:10,684 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:51:11] 2025-10-12 17:51:10,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:51:11] 2025-10-12 17:51:10,702 [wrapper] pilotpid: 544679
[2025-10-12 10:51:11] 2025-10-12 17:51:10,710 [wrapper] Pilot exit status: 0
[2025-10-12 10:51:11] 2025-10-12 17:51:10,736 [wrapper] pandaids: 6840181780
[2025-10-12 10:51:11] 2025-10-12 17:51:10,798 [wrapper] cleanup supervisor_pilot  544685 544680
[2025-10-12 10:51:11] 2025-10-12 17:51:10,803 [wrapper] Test setup, not cleaning
[2025-10-12 10:51:11] 2025-10-12 17:51:10,815 [wrapper] apfmon messages muted
[2025-10-12 10:51:11] 2025-10-12 17:51:10,821 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:51:11] 2025-10-12 17:51:10,829 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:51:11]  *** Error codes and diagnostics ***
[2025-10-12 10:51:11]     "exeErrorCode": 65,
[2025-10-12 10:51:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 10:51:11]     "pilotErrorCode": 1305,
[2025-10-12 10:51:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 10:51:11]  *** Listing of results directory ***
[2025-10-12 10:51:11] total 218912
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:55 pilot3.tar.gz
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:23 queuedata.json
[2025-10-12 10:51:11] -rwx------. 1 boinc boinc     36292 Oct 12 07:24 runpilot2-wrapper.sh
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc       100 Oct 12 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:51:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 10:46 run_atlas
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc       105 Oct 12 10:46 job.xml
[2025-10-12 10:51:11] -rw-r--r--. 2 boinc boinc 220042116 Oct 12 10:46 EVNT.46676267._004231.pool.root.1
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc      6594 Oct 12 10:46 init_data.xml
[2025-10-12 10:51:11] -rw-r--r--. 2 boinc boinc     15120 Oct 12 10:46 start_atlas.sh
[2025-10-12 10:51:11] drwxrwx--x. 2 boinc boinc      4096 Oct 12 10:46 shared
[2025-10-12 10:51:11] -rw-r--r--. 2 boinc boinc    569681 Oct 12 10:46 input.tar.gz
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc         0 Oct 12 10:46 boinc_lockfile
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc      2550 Oct 12 10:46 pandaJob.out
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc    975528 Oct 12 10:46 agis_schedconf.cvmfs.json
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc   1560580 Oct 12 10:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:51:11] drwx------. 5 boinc boinc      4096 Oct 12 10:47 pilot3
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc       523 Oct 12 10:48 boinc_task_state.xml
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc       987 Oct 12 10:48 memory_monitor_summary.json
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc     22426 Oct 12 10:48 log.46676269._080655.job.log.tgz.1
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc      8432 Oct 12 10:50 heartbeat.json
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc        22 Oct 12 10:51 wrapper_checkpoint.txt
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc      8192 Oct 12 10:51 boinc_mmap_file
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc        95 Oct 12 10:51 pilot_heartbeat.json
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc       822 Oct 12 10:51 pilotlog.txt
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc     88865 Oct 12 10:51 log.46676269._080655.job.log.1
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc       188 Oct 12 10:51 output.list
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc       620 Oct 12 10:51 runtime_log
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc    133120 Oct 12 10:51 result.tar.gz
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc       644 Oct 12 10:51 zYiMDmnACS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUEkNDmvr4Ppn.diag
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc      8528 Oct 12 10:51 runtime_log.err
[2025-10-12 10:51:11] -rw-r--r--. 1 boinc boinc     21796 Oct 12 10:51 stderr.txt
[2025-10-12 10:51:11] No HITS result produced
[2025-10-12 10:51:11]  *** Contents of shared directory: ***
[2025-10-12 10:51:11] total 215596
[2025-10-12 10:51:11] -rw-r--r--. 2 boinc boinc 220042116 Oct 12 10:46 ATLAS.root_0
[2025-10-12 10:51:11] -rw-r--r--. 2 boinc boinc     15120 Oct 12 10:46 start_atlas.sh
[2025-10-12 10:51:11] -rw-r--r--. 2 boinc boinc    569681 Oct 12 10:46 input.tar.gz
[2025-10-12 10:51:11] -rw-------. 1 boinc boinc    133120 Oct 12 10:51 result.tar.gz
10:51:13 (540811): run_atlas exited; CPU time 25.287932
10:51:13 (540811): called boinc_finish(0)

</stderr_txt>
]]>

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