Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:13:56 (1458): wrapper (7.7.26015): starting
04:13:56 (1458): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:13:56] Arguments: --nthreads 8
[2025-10-13 04:13:56] Threads: 8
[2025-10-13 04:13:56] Checking for CVMFS
[2025-10-13 04:13:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:13:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:13:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:13:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:13:59] 2.11.2.0 22894 17592 68100 151644 1 60 20730105 25165825 4632 130560 0 4908268 99.955 1638714 1284 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 04:13:59] CVMFS is ok
[2025-10-13 04:13:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:13:59] Checking for apptainer binary...
[2025-10-13 04:13:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:13:59] Running /usr/bin/apptainer --version
[2025-10-13 04:13:59] apptainer version 1.3.2-1.el7
[2025-10-13 04:13:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:14:19] cg-vwn425.simple-grid.lan
[2025-10-13 04:14:19] apptainer works
[2025-10-13 04:14:19] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:14:19] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:14:19] Starting ATLAS job with PandaID=6840181282
[2025-10-13 04:14:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:20:41]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:20:41] 2025-10-13 06:20:05,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:20:41] 2025-10-13 06:20:05,647 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:20:41] 2025-10-13 06:20:05,653 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:20:41] 2025-10-13 06:20:05,653 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,655 | INFO     | sum of deviations: 35803690811.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,655 | INFO     | mean x: 1760329303.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,655 | INFO     | mean y: 2467237.9563318775
[2025-10-13 08:20:41] 2025-10-13 06:20:05,656 | INFO     | -- intersect: -16923173843.343527
[2025-10-13 08:20:41] 2025-10-13 06:20:05,656 | INFO     | intersect: -16923173843.343527
[2025-10-13 08:20:41] 2025-10-13 06:20:05,656 | INFO     | chi2: 6.064371814542403
[2025-10-13 08:20:41] 2025-10-13 06:20:05,656 | INFO     | sum of square deviations: 3485088600.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,658 | INFO     | sum of deviations: 50282912409.5
[2025-10-13 08:20:41] 2025-10-13 06:20:05,658 | INFO     | mean x: 1760329150.5
[2025-10-13 08:20:41] 2025-10-13 06:20:05,658 | INFO     | mean y: 2476319.84375
[2025-10-13 08:20:41] 2025-10-13 06:20:05,659 | INFO     | -- intersect: -25395579983.941765
[2025-10-13 08:20:41] 2025-10-13 06:20:05,659 | INFO     | intersect: -25395579983.941765
[2025-10-13 08:20:41] 2025-10-13 06:20:05,659 | INFO     | chi2: 5.345419937261326
[2025-10-13 08:20:41] 2025-10-13 06:20:05,659 | INFO     | current chi2=5.345419937261326 (change=11.855339666954878 %)
[2025-10-13 08:20:41] 2025-10-13 06:20:05,659 | INFO     | right removable region: 223
[2025-10-13 08:20:41] 2025-10-13 06:20:05,660 | INFO     | sum of square deviations: 3485088600.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,661 | INFO     | sum of deviations: -39954053554.5
[2025-10-13 08:20:41] 2025-10-13 06:20:05,662 | INFO     | mean x: 1760329455.5
[2025-10-13 08:20:41] 2025-10-13 06:20:05,662 | INFO     | mean y: 2515595.3616071427
[2025-10-13 08:20:41] 2025-10-13 06:20:05,662 | INFO     | -- intersect: 20183436487.476322
[2025-10-13 08:20:41] 2025-10-13 06:20:05,662 | INFO     | intersect: 20183436487.476322
[2025-10-13 08:20:41] 2025-10-13 06:20:05,662 | INFO     | chi2: 1.7565780288946646
[2025-10-13 08:20:41] 2025-10-13 06:20:05,662 | INFO     | current chi2=1.7565780288946646 (change=71.03446024397154 %)
[2025-10-13 08:20:41] 2025-10-13 06:20:05,663 | INFO     | sum of square deviations: 3256879670.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,664 | INFO     | sum of deviations: -65810888403.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,665 | INFO     | mean x: 1760329608.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,665 | INFO     | mean y: 2532720.703196347
[2025-10-13 08:20:41] 2025-10-13 06:20:05,665 | INFO     | -- intersect: 35573037965.86159
[2025-10-13 08:20:41] 2025-10-13 06:20:05,665 | INFO     | intersect: 35573037965.86159
[2025-10-13 08:20:41] 2025-10-13 06:20:05,665 | INFO     | chi2: 0.9900107879287687
[2025-10-13 08:20:41] 2025-10-13 06:20:05,666 | INFO     | current chi2=0.9900107879287687 (change=43.63980582452475 %)
[2025-10-13 08:20:41] 2025-10-13 06:20:05,666 | INFO     | sum of square deviations: 3038856977.5
[2025-10-13 08:20:41] 2025-10-13 06:20:05,668 | INFO     | sum of deviations: -60703264859.5
[2025-10-13 08:20:41] 2025-10-13 06:20:05,668 | INFO     | mean x: 1760329760.5
[2025-10-13 08:20:41] 2025-10-13 06:20:05,668 | INFO     | mean y: 2529137.0607476635
[2025-10-13 08:20:41] 2025-10-13 06:20:05,668 | INFO     | -- intersect: 35166330685.76055
[2025-10-13 08:20:41] 2025-10-13 06:20:05,668 | INFO     | intersect: 35166330685.76055
[2025-10-13 08:20:41] 2025-10-13 06:20:05,669 | INFO     | chi2: 0.9878734897057199
[2025-10-13 08:20:41] 2025-10-13 06:20:05,669 | INFO     | current chi2=0.9878734897057199 (change=0.21588635690731944 %)
[2025-10-13 08:20:41] 2025-10-13 06:20:05,669 | INFO     | left removable region: 30
[2025-10-13 08:20:41] 2025-10-13 06:20:05,670 | INFO     | sum of square deviations: 2229146912.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,671 | INFO     | sum of deviations: -24872292012.000008
[2025-10-13 08:20:41] 2025-10-13 06:20:05,671 | INFO     | mean x: 1760330035.0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,671 | INFO     | mean y: 2524135.92746114
[2025-10-13 08:20:41] 2025-10-13 06:20:05,671 | INFO     | -- intersect: 19643868738.34826
[2025-10-13 08:20:41] 2025-10-13 06:20:05,672 | INFO     | intersect: 19643868738.34826
[2025-10-13 08:20:41] 2025-10-13 06:20:05,672 | INFO     | chi2: 0.1552717877060636
[2025-10-13 08:20:41] 2025-10-13 06:20:05,672 | INFO     | -- intersect: 19643868738.34826
[2025-10-13 08:20:41] 2025-10-13 06:20:05,672 | INFO     | current memory leak: -11.16 B/s (using 193 data points, chi2=0.16)
[2025-10-13 08:20:41] 2025-10-13 06:20:05,673 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 08:20:41] 2025-10-13 06:20:05,673 | INFO     | ..............................
[2025-10-13 08:20:41] 2025-10-13 06:20:05,673 | INFO     | . Timing measurements:
[2025-10-13 08:20:41] 2025-10-13 06:20:05,674 | INFO     | . get job = 0 s
[2025-10-13 08:20:41] 2025-10-13 06:20:05,674 | INFO     | . initial setup = 6 s
[2025-10-13 08:20:41] 2025-10-13 06:20:05,674 | INFO     | . payload setup = 133 s
[2025-10-13 08:20:41] 2025-10-13 06:20:05,674 | INFO     | . stage-in = 0 s
[2025-10-13 08:20:41] 2025-10-13 06:20:05,674 | INFO     | . payload execution = 14110 s
[2025-10-13 08:20:41] 2025-10-13 06:20:05,674 | INFO     | . stage-out = 3 s
[2025-10-13 08:20:41] 2025-10-13 06:20:05,674 | INFO     | . log creation = 1 s
[2025-10-13 08:20:41] 2025-10-13 06:20:05,674 | INFO     | ..............................
[2025-10-13 08:20:41] 2025-10-13 06:20:05,799 | INFO     | 
[2025-10-13 08:20:41] 2025-10-13 06:20:05,799 | INFO     | job summary report
[2025-10-13 08:20:41] 2025-10-13 06:20:05,799 | INFO     | --------------------------------------------------
[2025-10-13 08:20:41] 2025-10-13 06:20:05,799 | INFO     | PanDA job id: 6840181282
[2025-10-13 08:20:41] 2025-10-13 06:20:05,799 | INFO     | task id: 46676269
[2025-10-13 08:20:41] 2025-10-13 06:20:05,799 | INFO     | errors: (none)
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | pilot state: finished 
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | transexitcode: 0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | exeerrorcode: 0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | exeerrordiag: 
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | exitcode: 0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | exitmsg: OK
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | cpuconsumptiontime: 53201 s
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | nevents: 400
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | neventsw: 0
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | pid: 11841
[2025-10-13 08:20:41] 2025-10-13 06:20:05,800 | INFO     | pgrp: 11841
[2025-10-13 08:20:41] 2025-10-13 06:20:05,801 | INFO     | corecount: 8
[2025-10-13 08:20:41] 2025-10-13 06:20:05,801 | INFO     | event service: False
[2025-10-13 08:20:41] 2025-10-13 06:20:05,801 | INFO     | sizes: {0: 2348581, 1: 2348836, 2: 2348836, 12: 2348864, 23: 2348892, 34: 2348920, 45: 2349076, 55: 2349104, 66: 2349132, 77: 2349160, 88: 2349216, 90: 2349786, 98
[2025-10-13 08:20:41] 2025-10-13 06:20:05,801 | INFO     | --------------------------------------------------
[2025-10-13 08:20:41] 2025-10-13 06:20:05,801 | INFO     | 
[2025-10-13 08:20:41] 2025-10-13 06:20:05,801 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-10-13 08:20:41] 2025-10-13 06:20:06,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | job 6840181282 has completed (purged errors)
[2025-10-13 08:20:41] 2025-10-13 06:20:06,307 | INFO     | overall cleanup function is called
[2025-10-13 08:20:41] 2025-10-13 06:20:07,316 | INFO     | --- collectZombieJob: --- 10, [11841]
[2025-10-13 08:20:41] 2025-10-13 06:20:07,316 | INFO     | zombie collector waiting for pid 11841
[2025-10-13 08:20:41] 2025-10-13 06:20:07,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:20:41] 2025-10-13 06:20:07,316 | INFO     | collected zombie processes
[2025-10-13 08:20:41] 2025-10-13 06:20:07,316 | INFO     | will attempt to kill all subprocesses of pid=11841
[2025-10-13 08:20:41] 2025-10-13 06:20:07,457 | INFO     | process IDs to be killed: [11841] (in reverse order)
[2025-10-13 08:20:41] 2025-10-13 06:20:08,083 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:20:41] 2025-10-13 06:20:08,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:20:41] 2025-10-13 06:20:08,087 | INFO     | did not find any defunct processes belonging to 11841
[2025-10-13 08:20:41] 2025-10-13 06:20:08,090 | INFO     | did not find any defunct processes belonging to 11841
[2025-10-13 08:20:41] 2025-10-13 06:20:08,091 | INFO     | ready for new job
[2025-10-13 08:20:41] 2025-10-13 06:20:08,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:20:41] 2025-10-13 06:20:08,093 | INFO     | ***************************************
[2025-10-13 08:20:41] 2025-10-13 06:20:08,093 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:20:41] 2025-10-13 06:20:08,093 | INFO     | ***************************************
[2025-10-13 08:20:41] 2025-10-13 06:20:08,093 | INFO     | 
[2025-10-13 08:20:41] 2025-10-13 06:20:08,094 | INFO     | pilot is running in a VM
[2025-10-13 08:20:41] 2025-10-13 06:20:08,094 | INFO     | architecture information:
[2025-10-13 08:20:41] 2025-10-13 06:20:08,106 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:20:41] 2025-10-13 06:20:08,466 | INFO     | cat /etc/os-release:
[2025-10-13 08:20:41] NAME="CentOS Linux"
[2025-10-13 08:20:41] VERSION="7 (Core)"
[2025-10-13 08:20:41] ID="centos"
[2025-10-13 08:20:41] ID_LIKE="rhel fedora"
[2025-10-13 08:20:41] VERSION_ID="7"
[2025-10-13 08:20:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:20:41] ANSI_COLOR="0;31"
[2025-10-13 08:20:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:20:41] HOME_URL="https://www.centos.org/"
[2025-10-13 08:20:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:20:41] 
[2025-10-13 08:20:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:20:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:20:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:20:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:20:41] 
[2025-10-13 08:20:41] 2025-10-13 06:20:08,467 | INFO     | ***************************************
[2025-10-13 08:20:41] 2025-10-13 06:20:08,970 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-10-13 08:20:41] 2025-10-13 06:20:09,238 | INFO     | sufficient remaining disk space (495922970624 B)
[2025-10-13 08:20:41] 2025-10-13 06:20:09,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:20:41] 2025-10-13 06:20:09,238 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:20:41] 2025-10-13 06:20:09,238 | INFO     | update_server=False
[2025-10-13 08:20:41] 2025-10-13 06:20:09,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:20:41] 2025-10-13 06:20:09,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:20:41] 2025-10-13 06:20:09,264 | INFO     | aborting loop
[2025-10-13 08:20:41] 2025-10-13 06:20:09,279 | INFO     | all job control threads have been joined
[2025-10-13 08:20:41] 2025-10-13 06:20:09,368 | INFO     | all data control threads have been joined
[2025-10-13 08:20:41] 2025-10-13 06:20:09,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:20:41] 2025-10-13 06:20:10,244 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:10,270 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:10,285 | INFO     | [job] control thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:10,374 | INFO     | [data] control thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:10,472 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:10,499 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:10,613 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:10,700 | INFO     | all payload control threads have been joined
[2025-10-13 08:20:41] 2025-10-13 06:20:10,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:20:41] 2025-10-13 06:20:10,833 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:10,963 | INFO     | [job] validate thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:11,081 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:11,394 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:11,411 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:11,480 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:20:41] 2025-10-13 06:20:11,706 | INFO     | [payload] control thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:11,814 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:11,820 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:11,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:20:41] 2025-10-13 06:20:15,881 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:20:41] 2025-10-13 06:20:17,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871900333888)>', '<ExcThread(monitor, started 139871238743808)>']
[2025-10-13 08:20:41] 2025-10-13 06:20:22,065 | INFO     | all workflow threads have been joined
[2025-10-13 08:20:41] 2025-10-13 06:20:22,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:20:41] 2025-10-13 06:20:22,065 | INFO     | traces error code: 0
[2025-10-13 08:20:41] 2025-10-13 06:20:22,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:20:41] 2025-10-13 06:20:37,519 | INFO     | PID=5225 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 08:20:41] 2025-10-13 06:20:37,519 | INFO     | .. there are 9 such processes running
[2025-10-13 08:20:41] 2025-10-13 06:20:37,521 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:20:41] 2025-10-13 06:20:37,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:20:41] 2025-10-13 06:20:37,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:20:41] 2025-10-13 06:20:37,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:20:41] 2025-10-13 06:20:37,522 | INFO     | [monitor] control thread has ended
[2025-10-13 08:20:41] 2025-10-13 06:20:37,899 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:20:41] 2025-10-13 06:20:38,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:20:41] 2025-10-13 06:20:38,107 [wrapper] pilotpid: 5225
[2025-10-13 08:20:41] 2025-10-13 06:20:38,169 [wrapper] Pilot exit status: 0
[2025-10-13 08:20:41] 2025-10-13 06:20:38,647 [wrapper] pandaids: 6840181282
[2025-10-13 08:20:41] 2025-10-13 06:20:39,483 [wrapper] cleanup supervisor_pilot  6095 5226
[2025-10-13 08:20:41] 2025-10-13 06:20:39,574 [wrapper] Test setup, not cleaning
[2025-10-13 08:20:41] 2025-10-13 06:20:39,653 [wrapper] apfmon messages muted
[2025-10-13 08:20:41] 2025-10-13 06:20:39,740 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:20:41] 2025-10-13 06:20:39,850 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:20:41]  *** Error codes and diagnostics ***
[2025-10-13 08:20:41]     "exeErrorCode": 0,
[2025-10-13 08:20:41]     "exeErrorDiag": "",
[2025-10-13 08:20:41]     "pilotErrorCode": 0,
[2025-10-13 08:20:41]     "pilotErrorDiag": "",
[2025-10-13 08:20:41]  *** Listing of results directory ***
[2025-10-13 08:20:41] total 409848
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc      5112 Oct 12 16:05 queuedata.json
[2025-10-13 08:20:41] -rwx------. 1 boinc boinc     36292 Oct 12 16:06 runpilot2-wrapper.sh
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc       100 Oct 13 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:20:41] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 04:13 run_atlas
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc       105 Oct 13 04:13 job.xml
[2025-10-13 08:20:41] -rw-r--r--. 2 boinc boinc 220737488 Oct 13 04:13 EVNT.46676267._001842.pool.root.1
[2025-10-13 08:20:41] -rw-r--r--. 2 boinc boinc     15120 Oct 13 04:13 start_atlas.sh
[2025-10-13 08:20:41] drwxrwx--x. 2 boinc boinc        68 Oct 13 04:13 shared
[2025-10-13 08:20:41] -rw-r--r--. 2 boinc boinc    569689 Oct 13 04:13 input.tar.gz
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc      6391 Oct 13 04:13 init_data.xml
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc         0 Oct 13 04:13 boinc_lockfile
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc      2550 Oct 13 04:14 pandaJob.out
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc    974373 Oct 13 04:17 agis_schedconf.cvmfs.json
[2025-10-13 08:20:41] drwx------. 5 boinc boinc      4096 Oct 13 04:17 pilot3
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc 190270533 Oct 13 08:17 HITS.46676269._080241.pool.root.1
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc       531 Oct 13 08:17 boinc_task_state.xml
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc      1014 Oct 13 08:18 memory_monitor_summary.json
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc   1560580 Oct 13 08:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc    461045 Oct 13 08:18 log.46676269._080241.job.log.tgz.1
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc      7783 Oct 13 08:20 heartbeat.json
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc      8192 Oct 13 08:20 boinc_mmap_file
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc        28 Oct 13 08:20 wrapper_checkpoint.txt
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc        95 Oct 13 08:20 pilot_heartbeat.json
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc       819 Oct 13 08:20 pilotlog.txt
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc   1939531 Oct 13 08:20 log.46676269._080241.job.log.1
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc       357 Oct 13 08:20 output.list
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc       620 Oct 13 08:20 runtime_log
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc   2416640 Oct 13 08:20 result.tar.gz
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc      8717 Oct 13 08:20 runtime_log.err
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc       657 Oct 13 08:20 RUfNDmctBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm22TMDmoy9yBn.diag
[2025-10-13 08:20:41] -rw-r--r--. 1 boinc boinc     20590 Oct 13 08:20 stderr.txt
[2025-10-13 08:20:41] HITS file was successfully produced:
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc 190270533 Oct 13 08:17 shared/HITS.pool.root.1
[2025-10-13 08:20:41]  *** Contents of shared directory: ***
[2025-10-13 08:20:41] total 404312
[2025-10-13 08:20:41] -rw-r--r--. 2 boinc boinc 220737488 Oct 13 04:13 ATLAS.root_0
[2025-10-13 08:20:41] -rw-r--r--. 2 boinc boinc     15120 Oct 13 04:13 start_atlas.sh
[2025-10-13 08:20:41] -rw-r--r--. 2 boinc boinc    569689 Oct 13 04:13 input.tar.gz
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc 190270533 Oct 13 08:17 HITS.pool.root.1
[2025-10-13 08:20:41] -rw-------. 1 boinc boinc   2416640 Oct 13 08:20 result.tar.gz
08:20:42 (1458): run_atlas exited; CPU time 53399.041537
08:20:42 (1458): called boinc_finish(0)

</stderr_txt>
]]>

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