Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:45:21 (15882): wrapper (7.7.26015): starting
15:45:21 (15882): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 15:45:21] Arguments: --nthreads 9
[2025-10-12 15:45:21] Threads: 9
[2025-10-12 15:45:21] Checking for CVMFS
[2025-10-12 15:45:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:45:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:45:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:45:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:45:23] 2.13.2.0 169449 125442 529952 151635 1 367 21963480 32935937 37100 16776704 0 256071174 99.588 268739389 21004 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:45:23] CVMFS is ok
[2025-10-12 15:45:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:45:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:45:23] Further information can be found at the LHC@home message board.
[2025-10-12 15:45:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:45:23] Checking for apptainer binary...
[2025-10-12 15:45:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:45:23] Running /usr/bin/apptainer --version
[2025-10-12 15:45:24] apptainer version 1.4.3-1.el9
[2025-10-12 15:45:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:45:25] c6-12-27-4.aglt2.org
[2025-10-12 15:45:25] apptainer works
[2025-10-12 15:45:25] Set ATHENA_PROC_NUMBER=9
[2025-10-12 15:45:25] Set ATHENA_CORE_NUMBER=9
[2025-10-12 15:45:25] Starting ATLAS job with PandaID=6840225921
[2025-10-12 15:45:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:30:30 (2202154): wrapper (7.7.26015): starting
21:30:30 (2202154): wrapper: running run_atlas (--nthreads 11)
[2025-10-13 21:30:30] Arguments: --nthreads 11
[2025-10-13 21:30:30] Threads: 11
[2025-10-13 21:30:30] This job has been restarted, cleaning up previous attempt
[2025-10-13 21:30:30] Checking for CVMFS
[2025-10-13 21:30:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 21:30:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 21:30:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 21:30:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 21:30:30] 2.13.2.0 169449 127227 513924 151679 0 276 29386348 32935936 27119 16776704 0 262691962 99.586 276879784 20753 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 21:30:30] CVMFS is ok
[2025-10-13 21:30:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 21:30:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 21:30:30] Further information can be found at the LHC@home message board.
[2025-10-13 21:30:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 21:30:30] Checking for apptainer binary...
[2025-10-13 21:30:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 21:30:30] Running /usr/bin/apptainer --version
[2025-10-13 21:30:30] apptainer version 1.4.3-1.el9
[2025-10-13 21:30:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 21:30:31] c6-12-27-4.aglt2.org
[2025-10-13 21:30:31] apptainer works
[2025-10-13 21:30:31] Set ATHENA_PROC_NUMBER=11
[2025-10-13 21:30:31] Set ATHENA_CORE_NUMBER=11
[2025-10-13 21:30:31] Starting ATLAS job with PandaID=6840225921
[2025-10-13 21:30:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 01:22:24]  *** The last 200 lines of the pilot log: ***
[2025-10-14 01:22:24] 2025-10-14 05:21:49,870 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 01:22:24] 2025-10-14 05:21:49,870 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 01:22:24] 2025-10-14 05:21:49,874 | INFO     | fitting pss+swap vs Time
[2025-10-14 01:22:24] 2025-10-14 05:21:49,875 | INFO     | sum of square deviations: 3627122971.8678393
[2025-10-14 01:22:24] 2025-10-14 05:21:49,876 | INFO     | sum of deviations: 13499033783.308365
[2025-10-14 01:22:24] 2025-10-14 05:21:49,876 | INFO     | mean x: 1760412389.0969162
[2025-10-14 01:22:24] 2025-10-14 05:21:49,876 | INFO     | mean y: 2433780.4405286345
[2025-10-14 01:22:24] 2025-10-14 05:21:49,876 | INFO     | -- intersect: -6549278553.904815
[2025-10-14 01:22:24] 2025-10-14 05:21:49,876 | INFO     | intersect: -6549278553.904815
[2025-10-14 01:22:24] 2025-10-14 05:21:49,877 | INFO     | chi2: 2.57574964772448
[2025-10-14 01:22:24] 2025-10-14 05:21:49,877 | INFO     | sum of square deviations: 3392697379.319822
[2025-10-14 01:22:24] 2025-10-14 05:21:49,878 | INFO     | sum of deviations: 28238161460.009007
[2025-10-14 01:22:24] 2025-10-14 05:21:49,879 | INFO     | mean x: 1760412236.5990992
[2025-10-14 01:22:24] 2025-10-14 05:21:49,879 | INFO     | mean y: 2443208.045045045
[2025-10-14 01:22:24] 2025-10-14 05:21:49,879 | INFO     | -- intersect: -14649852418.518354
[2025-10-14 01:22:24] 2025-10-14 05:21:49,879 | INFO     | intersect: -14649852418.518354
[2025-10-14 01:22:24] 2025-10-14 05:21:49,879 | INFO     | chi2: 1.8955470324811659
[2025-10-14 01:22:24] 2025-10-14 05:21:49,879 | INFO     | current chi2=1.8955470324811659 (change=26.407947520995766 %)
[2025-10-14 01:22:24] 2025-10-14 05:21:49,879 | INFO     | sum of square deviations: 3168584140.967751
[2025-10-14 01:22:24] 2025-10-14 05:21:49,881 | INFO     | sum of deviations: 27715524009.871
[2025-10-14 01:22:24] 2025-10-14 05:21:49,881 | INFO     | mean x: 1760412084.096774
[2025-10-14 01:22:24] 2025-10-14 05:21:49,881 | INFO     | mean y: 2442851.6728110597
[2025-10-14 01:22:24] 2025-10-14 05:21:49,881 | INFO     | -- intersect: -15395836383.906992
[2025-10-14 01:22:24] 2025-10-14 05:21:49,881 | INFO     | intersect: -15395836383.906992
[2025-10-14 01:22:24] 2025-10-14 05:21:49,881 | INFO     | chi2: 1.8965121392897193
[2025-10-14 01:22:24] 2025-10-14 05:21:49,882 | INFO     | current chi2=1.8965121392897193 (change=-0.050914421642715375 %)
[2025-10-14 01:22:24] 2025-10-14 05:21:49,882 | INFO     | right removable region: 216
[2025-10-14 01:22:24] 2025-10-14 05:21:49,882 | INFO     | sum of square deviations: 3392683959.319822
[2025-10-14 01:22:24] 2025-10-14 05:21:49,883 | INFO     | sum of deviations: -27601218417.225227
[2025-10-14 01:22:24] 2025-10-14 05:21:49,883 | INFO     | mean x: 1760412541.5990992
[2025-10-14 01:22:24] 2025-10-14 05:21:49,884 | INFO     | mean y: 2460318.873873874
[2025-10-14 01:22:24] 2025-10-14 05:21:49,884 | INFO     | -- intersect: 14324316303.019459
[2025-10-14 01:22:24] 2025-10-14 05:21:49,884 | INFO     | intersect: 14324316303.019459
[2025-10-14 01:22:24] 2025-10-14 05:21:49,884 | INFO     | chi2: 0.8492872134665487
[2025-10-14 01:22:24] 2025-10-14 05:21:49,884 | INFO     | current chi2=0.8492872134665487 (change=67.02757140171434 %)
[2025-10-14 01:22:24] 2025-10-14 05:21:49,884 | INFO     | sum of square deviations: 3168570721.7695885
[2025-10-14 01:22:24] 2025-10-14 05:21:49,886 | INFO     | sum of deviations: -34398874622.29494
[2025-10-14 01:22:24] 2025-10-14 05:21:49,886 | INFO     | mean x: 1760412694.1013825
[2025-10-14 01:22:24] 2025-10-14 05:21:49,886 | INFO     | mean y: 2464907.649769585
[2025-10-14 01:22:24] 2025-10-14 05:21:49,886 | INFO     | -- intersect: 19113988955.965904
[2025-10-14 01:22:24] 2025-10-14 05:21:49,886 | INFO     | intersect: 19113988955.965904
[2025-10-14 01:22:24] 2025-10-14 05:21:49,886 | INFO     | chi2: 0.7826486165181511
[2025-10-14 01:22:24] 2025-10-14 05:21:49,886 | INFO     | current chi2=0.7826486165181511 (change=7.84641472186986 %)
[2025-10-14 01:22:24] 2025-10-14 05:21:49,886 | INFO     | left removable region: 20
[2025-10-14 01:22:24] 2025-10-14 05:21:49,887 | INFO     | sum of square deviations: 2334821378.7500005
[2025-10-14 01:22:24] 2025-10-14 05:21:49,888 | INFO     | sum of deviations: -11073523996.892859
[2025-10-14 01:22:24] 2025-10-14 05:21:49,888 | INFO     | mean x: 1760412663.607143
[2025-10-14 01:22:24] 2025-10-14 05:21:49,888 | INFO     | mean y: 2469968.7806122447
[2025-10-14 01:22:24] 2025-10-14 05:21:49,888 | INFO     | -- intersect: 8351704754.922716
[2025-10-14 01:22:24] 2025-10-14 05:21:49,888 | INFO     | intersect: 8351704754.922716
[2025-10-14 01:22:24] 2025-10-14 05:21:49,888 | INFO     | chi2: 0.0706402235586344
[2025-10-14 01:22:24] 2025-10-14 05:21:49,888 | INFO     | -- intersect: 8351704754.922716
[2025-10-14 01:22:24] 2025-10-14 05:21:49,889 | INFO     | current memory leak: -4.74 B/s (using 196 data points, chi2=0.07)
[2025-10-14 01:22:24] 2025-10-14 05:21:49,889 | INFO     | could have reported an average CPU frequency of 2595 MHz (11 samples)
[2025-10-14 01:22:24] 2025-10-14 05:21:49,889 | INFO     | ..............................
[2025-10-14 01:22:24] 2025-10-14 05:21:49,890 | INFO     | . Timing measurements:
[2025-10-14 01:22:24] 2025-10-14 05:21:49,890 | INFO     | . get job = 0 s
[2025-10-14 01:22:24] 2025-10-14 05:21:49,890 | INFO     | . initial setup = 3 s
[2025-10-14 01:22:24] 2025-10-14 05:21:49,890 | INFO     | . payload setup = 14 s
[2025-10-14 01:22:24] 2025-10-14 05:21:49,890 | INFO     | . stage-in = 0 s
[2025-10-14 01:22:24] 2025-10-14 05:21:49,890 | INFO     | . payload execution = 13812 s
[2025-10-14 01:22:24] 2025-10-14 05:21:49,890 | INFO     | . stage-out = 2 s
[2025-10-14 01:22:24] 2025-10-14 05:21:49,890 | INFO     | . log creation = 0 s
[2025-10-14 01:22:24] 2025-10-14 05:21:49,890 | INFO     | ..............................
[2025-10-14 01:22:24] 2025-10-14 05:21:50,090 | INFO     | time since job start (13859s) is within the limit (172800.0s)
[2025-10-14 01:22:24] 2025-10-14 05:21:50,204 | INFO     | 
[2025-10-14 01:22:24] 2025-10-14 05:21:50,205 | INFO     | job summary report
[2025-10-14 01:22:24] 2025-10-14 05:21:50,205 | INFO     | --------------------------------------------------
[2025-10-14 01:22:24] 2025-10-14 05:21:50,205 | INFO     | PanDA job id: 6840225921
[2025-10-14 01:22:24] 2025-10-14 05:21:50,205 | INFO     | task id: 46676269
[2025-10-14 01:22:24] 2025-10-14 05:21:50,205 | INFO     | errors: (none)
[2025-10-14 01:22:24] 2025-10-14 05:21:50,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 01:22:24] 2025-10-14 05:21:50,205 | INFO     | pilot state: finished 
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | transexitcode: 0
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | exeerrorcode: 0
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | exeerrordiag: 
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | exitcode: 0
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | exitmsg: OK
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | cpuconsumptiontime: 50656 s
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | nevents: 400
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | neventsw: 0
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | pid: 2221393
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | pgrp: 2221393
[2025-10-14 01:22:24] 2025-10-14 05:21:50,206 | INFO     | corecount: 11
[2025-10-14 01:22:24] 2025-10-14 05:21:50,207 | INFO     | event service: False
[2025-10-14 01:22:24] 2025-10-14 05:21:50,207 | INFO     | sizes: {0: 2348686, 1: 2348885, 11: 2349147, 12: 2349175, 13831: 2379723, 13833: 2388721, 13834: 2388905, 13839: 2389099}
[2025-10-14 01:22:24] 2025-10-14 05:21:50,207 | INFO     | --------------------------------------------------
[2025-10-14 01:22:24] 2025-10-14 05:21:50,207 | INFO     | 
[2025-10-14 01:22:24] 2025-10-14 05:21:50,207 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 01:22:24] 2025-10-14 05:21:50,233 | INFO     | job 6840225921 has completed (purged errors)
[2025-10-14 01:22:24] 2025-10-14 05:21:50,234 | INFO     | overall cleanup function is called
[2025-10-14 01:22:24] 2025-10-14 05:21:51,242 | INFO     | --- collectZombieJob: --- 10, [2221393]
[2025-10-14 01:22:24] 2025-10-14 05:21:51,243 | INFO     | zombie collector waiting for pid 2221393
[2025-10-14 01:22:24] 2025-10-14 05:21:51,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 01:22:24] 2025-10-14 05:21:51,243 | INFO     | collected zombie processes
[2025-10-14 01:22:24] 2025-10-14 05:21:51,243 | INFO     | will attempt to kill all subprocesses of pid=2221393
[2025-10-14 01:22:24] 2025-10-14 05:21:51,646 | INFO     | process IDs to be killed: [2221393] (in reverse order)
[2025-10-14 01:22:24] 2025-10-14 05:21:51,807 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 01:22:24] 2025-10-14 05:21:51,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 01:22:24] 2025-10-14 05:21:51,830 | INFO     | did not find any defunct processes belonging to 2221393
[2025-10-14 01:22:24] 2025-10-14 05:21:51,855 | INFO     | did not find any defunct processes belonging to 2221393
[2025-10-14 01:22:24] 2025-10-14 05:21:51,855 | INFO     | ready for new job
[2025-10-14 01:22:24] 2025-10-14 05:21:51,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 01:22:24] 2025-10-14 05:21:51,858 | INFO     | ***************************************
[2025-10-14 01:22:24] 2025-10-14 05:21:51,859 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 01:22:24] 2025-10-14 05:21:51,859 | INFO     | ***************************************
[2025-10-14 01:22:24] 2025-10-14 05:21:51,859 | INFO     | 
[2025-10-14 01:22:24] 2025-10-14 05:21:51,879 | INFO     | architecture information:
[2025-10-14 01:22:24] 2025-10-14 05:21:51,879 | INFO     | executing command: cat /etc/os-release
[2025-10-14 01:22:24] 2025-10-14 05:21:51,903 | INFO     | cat /etc/os-release:
[2025-10-14 01:22:24] NAME="CentOS Linux"
[2025-10-14 01:22:24] VERSION="7 (Core)"
[2025-10-14 01:22:24] ID="centos"
[2025-10-14 01:22:24] ID_LIKE="rhel fedora"
[2025-10-14 01:22:24] VERSION_ID="7"
[2025-10-14 01:22:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 01:22:24] ANSI_COLOR="0;31"
[2025-10-14 01:22:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 01:22:24] HOME_URL="https://www.centos.org/"
[2025-10-14 01:22:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 01:22:24] 
[2025-10-14 01:22:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 01:22:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 01:22:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 01:22:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 01:22:24] 
[2025-10-14 01:22:24] 2025-10-14 05:21:51,904 | INFO     | ***************************************
[2025-10-14 01:22:24] 2025-10-14 05:21:52,409 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-14 01:22:24] 2025-10-14 05:21:52,434 | INFO     | sufficient remaining disk space (96182730752 B)
[2025-10-14 01:22:24] 2025-10-14 05:21:52,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 01:22:24] 2025-10-14 05:21:52,435 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 01:22:24] 2025-10-14 05:21:52,435 | INFO     | update_server=False
[2025-10-14 01:22:24] 2025-10-14 05:21:52,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 01:22:24] 2025-10-14 05:21:52,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 01:22:24] 2025-10-14 05:21:52,435 | INFO     | aborting loop
[2025-10-14 01:22:24] 2025-10-14 05:21:52,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 01:22:24] 2025-10-14 05:21:52,630 | INFO     | all payload control threads have been joined
[2025-10-14 01:22:24] 2025-10-14 05:21:53,134 | INFO     | all data control threads have been joined
[2025-10-14 01:22:24] 2025-10-14 05:21:53,442 | INFO     | [job] job monitor thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:53,442 | INFO     | [job] retrieve thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:53,638 | INFO     | [payload] control thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:53,639 | INFO     | all job control threads have been joined
[2025-10-14 01:22:24] 2025-10-14 05:21:53,667 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:53,744 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:54,140 | INFO     | [data] control thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:54,323 | INFO     | [payload] validate_post thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:54,397 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:54,406 | INFO     | [job] validate thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:54,581 | INFO     | [data] copytool_out thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:54,645 | INFO     | [job] control thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:54,699 | INFO     | [payload] failed_post thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:54,840 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:54,914 | INFO     | [data] copytool_in thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:55,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 01:22:24] 2025-10-14 05:21:55,166 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 01:22:24] 2025-10-14 05:21:56,009 | INFO     | [job] queue monitor thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:21:59,172 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 01:22:24] 2025-10-14 05:22:15,151 | INFO     | [monitor] cgroup control has ended
[2025-10-14 01:22:24] 2025-10-14 05:22:17,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548164085568)>', '<ExcThread(monitor, started 140547217938176)>']
[2025-10-14 01:22:24] 2025-10-14 05:22:22,259 | INFO     | all workflow threads have been joined
[2025-10-14 01:22:24] 2025-10-14 05:22:22,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 01:22:24] 2025-10-14 05:22:22,260 | INFO     | traces error code: 0
[2025-10-14 01:22:24] 2025-10-14 05:22:22,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 01:22:24] 2025-10-14 05:22:23,720 | INFO     | PID=2209584 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 01:22:24] 2025-10-14 05:22:23,721 | INFO     | .. there are 32 such processes running
[2025-10-14 01:22:24] 2025-10-14 05:22:23,723 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 01:22:24] 2025-10-14 05:22:23,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 01:22:24] 2025-10-14 05:22:23,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 01:22:24] 2025-10-14 05:22:23,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 01:22:24] 2025-10-14 05:22:23,723 | INFO     | [monitor] control thread has ended
[2025-10-14 01:22:24] 2025-10-14 05:22:24,023 [wrapper] ==== pilot stdout END ====
[2025-10-14 01:22:24] 2025-10-14 05:22:24,027 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 01:22:24] 2025-10-14 05:22:24,030 [wrapper] pilotpid: 2209584
[2025-10-14 01:22:24] 2025-10-14 05:22:24,034 [wrapper] Pilot exit status: 0
[2025-10-14 01:22:24] 2025-10-14 05:22:24,047 [wrapper] pandaids: 6840225921
[2025-10-14 01:22:24] 2025-10-14 05:22:24,152 [wrapper] cleanup supervisor_pilot 3001015 2209585
[2025-10-14 01:22:24] 2025-10-14 05:22:24,159 [wrapper] Test setup, not cleaning
[2025-10-14 01:22:24] 2025-10-14 05:22:24,162 [wrapper] apfmon messages muted
[2025-10-14 01:22:24] 2025-10-14 05:22:24,167 [wrapper] ==== wrapper stdout END ====
[2025-10-14 01:22:24] 2025-10-14 05:22:24,171 [wrapper] ==== wrapper stderr END ====
[2025-10-14 01:22:24]  *** Error codes and diagnostics ***
[2025-10-14 01:22:24]     "exeErrorCode": 0,
[2025-10-14 01:22:24]     "exeErrorDiag": "",
[2025-10-14 01:22:24]     "pilotErrorCode": 0,
[2025-10-14 01:22:24]     "pilotErrorDiag": "",
[2025-10-14 01:22:24]  *** Listing of results directory ***
[2025-10-14 01:22:24] total 629172
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:59 queuedata.json
[2025-10-14 01:22:24] -rwx------. 1 boincer umatlas     36292 Oct 12 11:59 runpilot2-wrapper.sh
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 01:22:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:45 run_atlas
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:45 job.xml
[2025-10-14 01:22:24] -rw-r--r--. 3 boincer umatlas 219778533 Oct 12 15:45 EVNT.46676267._004600.pool.root.1
[2025-10-14 01:22:24] -rw-r--r--. 3 boincer umatlas 219778533 Oct 12 15:45 ATLAS.root_0
[2025-10-14 01:22:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:45 start_atlas.sh
[2025-10-14 01:22:24] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:45 shared
[2025-10-14 01:22:24] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:45 input.tar.gz
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:45 boinc_lockfile
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 21:30 pandaJob.out
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas    972807 Oct 13 21:30 agis_schedconf.cvmfs.json
[2025-10-14 01:22:24] drwx------. 5 boincer umatlas      4096 Oct 13 21:30 pilot3
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas      6863 Oct 14 01:20 init_data.xml
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas 196135975 Oct 14 01:21 HITS.46676269._082961.pool.root.1
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas       532 Oct 14 01:21 boinc_task_state.xml
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas      1058 Oct 14 01:21 memory_monitor_summary.json
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas   1560580 Oct 14 01:21 agis_ddmendpoints.agis.ALL.json
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas    513175 Oct 14 01:21 log.46676269._082961.job.log.tgz.1
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas      7863 Oct 14 01:21 heartbeat.json
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 01:22 boinc_mmap_file
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas        29 Oct 14 01:22 wrapper_checkpoint.txt
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas        95 Oct 14 01:22 pilot_heartbeat.json
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas       823 Oct 14 01:22 pilotlog.txt
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas   1827781 Oct 14 01:22 log.46676269._082961.job.log.1
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas       357 Oct 14 01:22 output.list
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas       620 Oct 14 01:22 runtime_log
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas   2355200 Oct 14 01:22 result.tar.gz
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas      8801 Oct 14 01:22 runtime_log.err
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas       788 Oct 14 01:22 gxKODmMfDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzXkNDmcFnk8m.diag
[2025-10-14 01:22:24] -rw-r--r--. 1 boincer umatlas     23179 Oct 14 01:22 stderr.txt
[2025-10-14 01:22:24] HITS file was successfully produced:
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas 196135975 Oct 14 01:21 shared/HITS.pool.root.1
[2025-10-14 01:22:24]  *** Contents of shared directory: ***
[2025-10-14 01:22:24] total 409052
[2025-10-14 01:22:24] -rw-r--r--. 3 boincer umatlas 219778533 Oct 12 15:45 ATLAS.root_0
[2025-10-14 01:22:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:45 start_atlas.sh
[2025-10-14 01:22:24] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 15:45 input.tar.gz
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas 196135975 Oct 14 01:21 HITS.pool.root.1
[2025-10-14 01:22:24] -rw-------. 1 boincer umatlas   2355200 Oct 14 01:22 result.tar.gz
01:22:46 (2202154): run_atlas exited; CPU time 51217.989862
01:22:46 (2202154): called boinc_finish(0)

</stderr_txt>
]]>

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