Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:22:33 (26949): wrapper (7.7.26015): starting
13:22:33 (26949): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:22:33] Arguments: --nthreads 8
[2025-10-12 13:22:33] Threads: 8
[2025-10-12 13:22:33] Checking for CVMFS
[2025-10-12 13:22:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:22:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:22:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:22:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:22:33] 2.11.2.0 6956 53151 130736 151629 2 56 10295091 18432000 1833 130560 0 48241702 99.973 2395580 39857 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:22:33] CVMFS is ok
[2025-10-12 13:22:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:22:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:22:33] Further information can be found at the LHC@home message board.
[2025-10-12 13:22:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:22:33] Checking for apptainer binary...
[2025-10-12 13:22:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:22:33] Running /usr/bin/apptainer --version
[2025-10-12 13:22:34] apptainer version 1.3.2-1.el7
[2025-10-12 13:22:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:22:34] c-206-16.aglt2.org
[2025-10-12 13:22:34] apptainer works
[2025-10-12 13:22:34] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:22:34] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:22:34] Starting ATLAS job with PandaID=6838990910
[2025-10-12 13:22:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:23:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:23:09] 2025-10-12 20:22:27,728 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:23:09] 2025-10-12 20:22:27,728 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,729 | INFO     | sum of deviations: 4127250850.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,729 | INFO     | mean x: 1760295158.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,729 | INFO     | mean y: 2457754.903954802
[2025-10-12 16:23:09] 2025-10-12 20:22:27,729 | INFO     | -- intersect: -4222885538.801449
[2025-10-12 16:23:09] 2025-10-12 20:22:27,729 | INFO     | intersect: -4222885538.801449
[2025-10-12 16:23:09] 2025-10-12 20:22:27,729 | INFO     | chi2: 2.0739145290761636
[2025-10-12 16:23:09] 2025-10-12 20:22:27,730 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,730 | INFO     | sum of deviations: 15358891648.999996
[2025-10-12 16:23:09] 2025-10-12 20:22:27,731 | INFO     | mean x: 1760295005.5
[2025-10-12 16:23:09] 2025-10-12 20:22:27,731 | INFO     | mean y: 2469562.2558139535
[2025-10-12 16:23:09] 2025-10-12 20:22:27,731 | INFO     | -- intersect: -17133009433.836882
[2025-10-12 16:23:09] 2025-10-12 20:22:27,731 | INFO     | intersect: -17133009433.836882
[2025-10-12 16:23:09] 2025-10-12 20:22:27,731 | INFO     | chi2: 1.302652811491569
[2025-10-12 16:23:09] 2025-10-12 20:22:27,731 | INFO     | current chi2=1.302652811491569 (change=37.18869349587696 %)
[2025-10-12 16:23:09] 2025-10-12 20:22:27,732 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,732 | INFO     | sum of deviations: 14864731625.000008
[2025-10-12 16:23:09] 2025-10-12 20:22:27,732 | INFO     | mean x: 1760294853.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,733 | INFO     | mean y: 2468998.3173652696
[2025-10-12 16:23:09] 2025-10-12 20:22:27,733 | INFO     | -- intersect: -18116364199.342037
[2025-10-12 16:23:09] 2025-10-12 20:22:27,733 | INFO     | intersect: -18116364199.342037
[2025-10-12 16:23:09] 2025-10-12 20:22:27,733 | INFO     | chi2: 1.30371163473534
[2025-10-12 16:23:09] 2025-10-12 20:22:27,733 | INFO     | current chi2=1.30371163473534 (change=-0.08128207565594982 %)
[2025-10-12 16:23:09] 2025-10-12 20:22:27,733 | INFO     | right removable region: 166
[2025-10-12 16:23:09] 2025-10-12 20:22:27,733 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,734 | INFO     | sum of deviations: -18731112681.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,734 | INFO     | mean x: 1760295310.5
[2025-10-12 16:23:09] 2025-10-12 20:22:27,734 | INFO     | mean y: 2482003.906976744
[2025-10-12 16:23:09] 2025-10-12 20:22:27,735 | INFO     | -- intersect: 20900255805.986507
[2025-10-12 16:23:09] 2025-10-12 20:22:27,735 | INFO     | intersect: 20900255805.986507
[2025-10-12 16:23:09] 2025-10-12 20:22:27,735 | INFO     | chi2: 0.8282393857583655
[2025-10-12 16:23:09] 2025-10-12 20:22:27,735 | INFO     | current chi2=0.8282393857583655 (change=60.06395759581715 %)
[2025-10-12 16:23:09] 2025-10-12 20:22:27,735 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,736 | INFO     | sum of deviations: -17992531635.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,736 | INFO     | mean x: 1760295463.0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,736 | INFO     | mean y: 2481127.1856287424
[2025-10-12 16:23:09] 2025-10-12 20:22:27,736 | INFO     | -- intersect: 21933841927.59701
[2025-10-12 16:23:09] 2025-10-12 20:22:27,737 | INFO     | intersect: 21933841927.59701
[2025-10-12 16:23:09] 2025-10-12 20:22:27,737 | INFO     | chi2: 0.8236144825830104
[2025-10-12 16:23:09] 2025-10-12 20:22:27,737 | INFO     | current chi2=0.8236144825830104 (change=0.5584017440948436 %)
[2025-10-12 16:23:09] 2025-10-12 20:22:27,737 | INFO     | left removable region: 20
[2025-10-12 16:23:09] 2025-10-12 20:22:27,737 | INFO     | sum of square deviations: 964976232.5
[2025-10-12 16:23:09] 2025-10-12 20:22:27,738 | INFO     | sum of deviations: -1540836576.0000002
[2025-10-12 16:23:09] 2025-10-12 20:22:27,738 | INFO     | mean x: 1760295432.5
[2025-10-12 16:23:09] 2025-10-12 20:22:27,738 | INFO     | mean y: 2487295.6438356163
[2025-10-12 16:23:09] 2025-10-12 20:22:27,738 | INFO     | -- intersect: 2813258686.287117
[2025-10-12 16:23:09] 2025-10-12 20:22:27,738 | INFO     | intersect: 2813258686.287117
[2025-10-12 16:23:09] 2025-10-12 20:22:27,738 | INFO     | chi2: 0.01602014948822131
[2025-10-12 16:23:09] 2025-10-12 20:22:27,739 | INFO     | -- intersect: 2813258686.287117
[2025-10-12 16:23:09] 2025-10-12 20:22:27,739 | INFO     | current memory leak: -1.60 B/s (using 146 data points, chi2=0.02)
[2025-10-12 16:23:09] 2025-10-12 20:22:27,739 | INFO     | could have reported an average CPU frequency of 2533 MHz (9 samples)
[2025-10-12 16:23:09] 2025-10-12 20:22:27,739 | INFO     | ..............................
[2025-10-12 16:23:09] 2025-10-12 20:22:27,739 | INFO     | . Timing measurements:
[2025-10-12 16:23:09] 2025-10-12 20:22:27,739 | INFO     | . get job = 0 s
[2025-10-12 16:23:09] 2025-10-12 20:22:27,740 | INFO     | . initial setup = 2 s
[2025-10-12 16:23:09] 2025-10-12 20:22:27,740 | INFO     | . payload setup = 4 s
[2025-10-12 16:23:09] 2025-10-12 20:22:27,740 | INFO     | . stage-in = 0 s
[2025-10-12 16:23:09] 2025-10-12 20:22:27,740 | INFO     | . payload execution = 10751 s
[2025-10-12 16:23:09] 2025-10-12 20:22:27,740 | INFO     | . stage-out = 1 s
[2025-10-12 16:23:09] 2025-10-12 20:22:27,740 | INFO     | . log creation = 0 s
[2025-10-12 16:23:09] 2025-10-12 20:22:27,740 | INFO     | ..............................
[2025-10-12 16:23:09] 2025-10-12 20:22:27,818 | INFO     | 
[2025-10-12 16:23:09] 2025-10-12 20:22:27,818 | INFO     | job summary report
[2025-10-12 16:23:09] 2025-10-12 20:22:27,818 | INFO     | --------------------------------------------------
[2025-10-12 16:23:09] 2025-10-12 20:22:27,818 | INFO     | PanDA job id: 6838990910
[2025-10-12 16:23:09] 2025-10-12 20:22:27,818 | INFO     | task id: 46676269
[2025-10-12 16:23:09] 2025-10-12 20:22:27,818 | INFO     | errors: (none)
[2025-10-12 16:23:09] 2025-10-12 20:22:27,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:23:09] 2025-10-12 20:22:27,818 | INFO     | pilot state: finished 
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | transexitcode: 0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | exeerrorcode: 0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | exeerrordiag: 
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | exitcode: 0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | exitmsg: OK
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | cpuconsumptiontime: 81113 s
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | nevents: 400
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | neventsw: 0
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | pid: 5995
[2025-10-12 16:23:09] 2025-10-12 20:22:27,819 | INFO     | pgrp: 5995
[2025-10-12 16:23:09] 2025-10-12 20:22:27,820 | INFO     | corecount: 8
[2025-10-12 16:23:09] 2025-10-12 20:22:27,820 | INFO     | event service: False
[2025-10-12 16:23:09] 2025-10-12 20:22:27,820 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 4: 2349175, 12: 2349203, 10759: 2378277, 10760: 2378404, 10761: 2387514, 10767: 2387716}
[2025-10-12 16:23:09] 2025-10-12 20:22:27,820 | INFO     | --------------------------------------------------
[2025-10-12 16:23:09] 2025-10-12 20:22:27,820 | INFO     | 
[2025-10-12 16:23:09] 2025-10-12 20:22:27,820 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 16:23:09] 2025-10-12 20:22:27,832 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,833 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,833 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,833 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,834 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:23:09] 2025-10-12 20:22:27,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,835 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:23:09] 2025-10-12 20:22:27,835 | INFO     | job 6838990910 has completed (purged errors)
[2025-10-12 16:23:09] 2025-10-12 20:22:27,835 | INFO     | overall cleanup function is called
[2025-10-12 16:23:09] 2025-10-12 20:22:28,842 | INFO     | --- collectZombieJob: --- 10, [5995]
[2025-10-12 16:23:09] 2025-10-12 20:22:28,842 | INFO     | zombie collector waiting for pid 5995
[2025-10-12 16:23:09] 2025-10-12 20:22:28,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:23:09] 2025-10-12 20:22:28,843 | INFO     | collected zombie processes
[2025-10-12 16:23:09] 2025-10-12 20:22:28,843 | INFO     | will attempt to kill all subprocesses of pid=5995
[2025-10-12 16:23:09] 2025-10-12 20:22:28,988 | INFO     | process IDs to be killed: [5995] (in reverse order)
[2025-10-12 16:23:09] 2025-10-12 20:22:29,029 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:23:09] 2025-10-12 20:22:29,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:23:09] 2025-10-12 20:22:29,035 | INFO     | did not find any defunct processes belonging to 5995
[2025-10-12 16:23:09] 2025-10-12 20:22:29,040 | INFO     | did not find any defunct processes belonging to 5995
[2025-10-12 16:23:09] 2025-10-12 20:22:29,040 | INFO     | ready for new job
[2025-10-12 16:23:09] 2025-10-12 20:22:29,040 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:23:09] 2025-10-12 20:22:29,042 | INFO     | ***************************************
[2025-10-12 16:23:09] 2025-10-12 20:22:29,042 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:23:09] 2025-10-12 20:22:29,043 | INFO     | ***************************************
[2025-10-12 16:23:09] 2025-10-12 20:22:29,043 | INFO     | 
[2025-10-12 16:23:09] 2025-10-12 20:22:29,044 | INFO     | architecture information:
[2025-10-12 16:23:09] 2025-10-12 20:22:29,044 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:23:09] 2025-10-12 20:22:29,054 | INFO     | cat /etc/os-release:
[2025-10-12 16:23:09] NAME="CentOS Linux"
[2025-10-12 16:23:09] VERSION="7 (Core)"
[2025-10-12 16:23:09] ID="centos"
[2025-10-12 16:23:09] ID_LIKE="rhel fedora"
[2025-10-12 16:23:09] VERSION_ID="7"
[2025-10-12 16:23:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:23:09] ANSI_COLOR="0;31"
[2025-10-12 16:23:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:23:09] HOME_URL="https://www.centos.org/"
[2025-10-12 16:23:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:23:09] 
[2025-10-12 16:23:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:23:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:23:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:23:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:23:09] 
[2025-10-12 16:23:09] 2025-10-12 20:22:29,055 | INFO     | ***************************************
[2025-10-12 16:23:09] 2025-10-12 20:22:29,557 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 16:23:09] 2025-10-12 20:22:29,571 | INFO     | sufficient remaining disk space (28215083008 B)
[2025-10-12 16:23:09] 2025-10-12 20:22:29,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:23:09] 2025-10-12 20:22:29,577 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:23:09] 2025-10-12 20:22:29,577 | INFO     | update_server=False
[2025-10-12 16:23:09] 2025-10-12 20:22:29,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:23:09] 2025-10-12 20:22:29,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:23:09] 2025-10-12 20:22:29,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:23:09] 2025-10-12 20:22:29,878 | INFO     | all job control threads have been joined
[2025-10-12 16:23:09] 2025-10-12 20:22:30,024 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:23:09] 2025-10-12 20:22:30,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:23:09] 2025-10-12 20:22:30,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:23:09] 2025-10-12 20:22:30,024 | INFO     | will abort loop
[2025-10-12 16:23:09] 2025-10-12 20:22:30,187 | INFO     | all data control threads have been joined
[2025-10-12 16:23:09] 2025-10-12 20:22:30,583 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:30,584 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:30,881 | INFO     | [job] control thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:30,987 | INFO     | all payload control threads have been joined
[2025-10-12 16:23:09] 2025-10-12 20:22:30,998 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,030 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,057 | INFO     | [job] validate thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,063 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,193 | INFO     | [data] control thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,601 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,737 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,846 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,871 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,950 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,976 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:31,993 | INFO     | [payload] control thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:32,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:23:09] 2025-10-12 20:22:36,261 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:23:09] 2025-10-12 20:22:43,628 [wrapper] supervise_pilot (15 min periods counter: 13)
[2025-10-12 16:23:09] 2025-10-12 20:23:00,640 | INFO     | PID=31191 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 16:23:09] 2025-10-12 20:23:00,641 | INFO     | .. there are 3 such processes running
[2025-10-12 16:23:09] 2025-10-12 20:23:00,641 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:23:09] 2025-10-12 20:23:00,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:23:09] 2025-10-12 20:23:00,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:23:09] 2025-10-12 20:23:03,212 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:23:09] 2025-10-12 20:23:04,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648637441856)>', '<ExcThread(monitor, started 139647900444416)>']
[2025-10-12 16:23:09] 2025-10-12 20:23:04,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:23:09] 2025-10-12 20:23:04,661 | INFO     | [monitor] control thread has ended
[2025-10-12 16:23:09] 2025-10-12 20:23:09,650 | INFO     | all workflow threads have been joined
[2025-10-12 16:23:09] 2025-10-12 20:23:09,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:23:09] 2025-10-12 20:23:09,651 | INFO     | traces error code: 0
[2025-10-12 16:23:09] 2025-10-12 20:23:09,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:23:09] 2025-10-12 20:23:09,774 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:23:09] 2025-10-12 20:23:09,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:23:09] 2025-10-12 20:23:09,779 [wrapper] pilotpid: 31191
[2025-10-12 16:23:09] 2025-10-12 20:23:09,782 [wrapper] Pilot exit status: 0
[2025-10-12 16:23:09] 2025-10-12 20:23:09,791 [wrapper] pandaids: 6838990910
[2025-10-12 16:23:09] 2025-10-12 20:23:09,825 [wrapper] cleanup supervisor_pilot 23358 31192
[2025-10-12 16:23:09] 2025-10-12 20:23:09,830 [wrapper] Test setup, not cleaning
[2025-10-12 16:23:09] 2025-10-12 20:23:09,832 [wrapper] apfmon messages muted
[2025-10-12 16:23:09] 2025-10-12 20:23:09,834 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:23:09] 2025-10-12 20:23:09,836 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:23:09]  *** Error codes and diagnostics ***
[2025-10-12 16:23:09]     "exeErrorCode": 0,
[2025-10-12 16:23:09]     "exeErrorDiag": "",
[2025-10-12 16:23:09]     "pilotErrorCode": 0,
[2025-10-12 16:23:09]     "pilotErrorDiag": "",
[2025-10-12 16:23:09]  *** Listing of results directory ***
[2025-10-12 16:23:09] total 412580
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 18:57 queuedata.json
[2025-10-12 16:23:09] -rwx------ 1 boincer umatlas     36292 Oct 11 18:57 runpilot2-wrapper.sh
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:23:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:22 run_atlas
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:22 job.xml
[2025-10-12 16:23:09] -rw-r--r-- 2 boincer umatlas 220826484 Oct 12 13:22 EVNT.46676267._002675.pool.root.1
[2025-10-12 16:23:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:22 start_atlas.sh
[2025-10-12 16:23:09] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:22 shared
[2025-10-12 16:23:09] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 13:22 input.tar.gz
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:22 boinc_lockfile
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:22 pandaJob.out
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas    975528 Oct 12 13:22 agis_schedconf.cvmfs.json
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas   1560580 Oct 12 13:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:23:09] drwx------ 5 boincer umatlas      4096 Oct 12 13:22 pilot3
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas      5950 Oct 12 16:21 init_data.xml
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas 193892447 Oct 12 16:21 HITS.46676269._066399.pool.root.1
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas       530 Oct 12 16:22 boinc_task_state.xml
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas      1053 Oct 12 16:22 memory_monitor_summary.json
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas    418892 Oct 12 16:22 log.46676269._066399.job.log.tgz.1
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas      7854 Oct 12 16:22 heartbeat.json
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas        95 Oct 12 16:22 pilot_heartbeat.json
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas        28 Oct 12 16:22 wrapper_checkpoint.txt
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 16:22 boinc_mmap_file
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas      5007 Oct 12 16:23 pilotlog.txt
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas   1512139 Oct 12 16:23 log.46676269._066399.job.log.1
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas       357 Oct 12 16:23 output.list
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas       620 Oct 12 16:23 runtime_log
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas   1945600 Oct 12 16:23 result.tar.gz
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 16:23 runtime_log.err
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas       662 Oct 12 16:23 lUYKDmEixR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmajSMDmVF1sEm.diag
[2025-10-12 16:23:09] -rw-r--r-- 1 boincer umatlas     20903 Oct 12 16:23 stderr.txt
[2025-10-12 16:23:09] HITS file was successfully produced:
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas 193892447 Oct 12 16:21 shared/HITS.pool.root.1
[2025-10-12 16:23:09]  *** Contents of shared directory: ***
[2025-10-12 16:23:09] total 407484
[2025-10-12 16:23:09] -rw-r--r-- 2 boincer umatlas 220826484 Oct 12 13:22 ATLAS.root_0
[2025-10-12 16:23:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:22 start_atlas.sh
[2025-10-12 16:23:09] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 13:22 input.tar.gz
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas 193892447 Oct 12 16:21 HITS.pool.root.1
[2025-10-12 16:23:09] -rw------- 1 boincer umatlas   1945600 Oct 12 16:23 result.tar.gz
16:23:11 (26949): run_atlas exited; CPU time 81279.123629
16:23:11 (26949): called boinc_finish(0)

</stderr_txt>
]]>

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