Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:22:31 (2881606): wrapper (7.7.26015): starting
09:22:31 (2881606): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 09:22:31] Arguments: --nthreads 3
[2025-10-13 09:22:31] Threads: 3
[2025-10-13 09:22:31] Checking for CVMFS
[2025-10-13 09:22:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:22:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:22:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:22:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:22:31] 2.9.2.0 1212649 5545 83936 151653 0 57 3877939 36864001 0 130560 0 4404158 99.991 189388 842 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 09:22:31] CVMFS is ok
[2025-10-13 09:22:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:22:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:22:31] Further information can be found at the LHC@home message board.
[2025-10-13 09:22:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:22:31] Checking for apptainer binary...
[2025-10-13 09:22:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:22:31] Running /usr/bin/apptainer --version
[2025-10-13 09:22:32] apptainer version 1.4.1-1.1
[2025-10-13 09:22:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:22:32] thA325a
[2025-10-13 09:22:32] apptainer works
[2025-10-13 09:22:32] Set ATHENA_PROC_NUMBER=3
[2025-10-13 09:22:32] Set ATHENA_CORE_NUMBER=3
[2025-10-13 09:22:32] Starting ATLAS job with PandaID=6840181765
[2025-10-13 09:22:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:45:49]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:45:49] 2025-10-13 08:44:53,729 | INFO     | aborting loop
[2025-10-13 10:45:49] 2025-10-13 08:44:54,255 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:54,255 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:54,276 | INFO     | all payload control threads have been joined
[2025-10-13 10:45:49] 2025-10-13 08:44:54,562 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:54,609 | INFO     | [data] control thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:54,734 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:54,742 | INFO     | all job control threads have been joined
[2025-10-13 10:45:49] 2025-10-13 08:44:54,749 | INFO     | [job] validate thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:54,823 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:54,841 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:55,107 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:55,255 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:55,281 | INFO     | [payload] control thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:55,718 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:55,734 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:55,748 | INFO     | [job] control thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:44:57,256 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:45:04,217 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:45:49] 2025-10-13 08:45:05,222 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:45:49] 2025-10-13 08:45:23,452 | INFO     | PID=2885320 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:45:49] 2025-10-13 08:45:23,453 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:45:49] 2025-10-13 08:45:23,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:45:49] 2025-10-13 08:45:23,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:45:49] 2025-10-13 08:45:43,122 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:45:49] 2025-10-13 08:45:44,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202230978368)>', '<ExcThread(monitor, started 140201741506304)>']
[2025-10-13 10:45:49] 2025-10-13 08:45:45,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:45:49] 2025-10-13 08:45:45,570 | INFO     | [monitor] control thread has ended
[2025-10-13 10:45:49] 2025-10-13 08:45:49,676 | INFO     | all workflow threads have been joined
[2025-10-13 10:45:49] 2025-10-13 08:45:49,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:45:49] 2025-10-13 08:45:49,676 | INFO     | traces error code: 0
[2025-10-13 10:45:49] 2025-10-13 08:45:49,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:45:49] 2025-10-13 08:45:49,727 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:45:49] 2025-10-13 08:45:49,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:45:49] 2025-10-13 08:45:49,731 [wrapper] pilotpid: 2885320
[2025-10-13 10:45:49] 2025-10-13 08:45:49,734 [wrapper] Pilot exit status: 0
[2025-10-13 10:45:49] 2025-10-13 08:45:49,741 [wrapper] pandaids: 6840181765
[2025-10-13 10:45:49] 2025-10-13 08:45:49,757 [wrapper] cleanup supervisor_pilot 2903585 2885321
[2025-10-13 10:45:49] 2025-10-13 08:45:49,759 [wrapper] Test setup, not cleaning
[2025-10-13 10:45:49] 2025-10-13 08:45:49,762 [wrapper] apfmon messages muted
[2025-10-13 10:45:49] 2025-10-13 08:45:49,764 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:45:49] 2025-10-13 08:45:49,766 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:45:49]  *** Error codes and diagnostics ***
[2025-10-13 10:45:49]     "exeErrorCode": 0,
[2025-10-13 10:45:49]     "exeErrorDiag": "",
[2025-10-13 10:45:49]     "pilotErrorCode": 0,
[2025-10-13 10:45:49]     "pilotErrorDiag": "",
[2025-10-13 10:45:49]  *** Listing of results directory ***
[2025-10-13 10:45:49] total 410808
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:23 queuedata.json
[2025-10-13 10:45:49] -rwx------ 1 boinc boinc     36292 Oct 12 16:24 runpilot2-wrapper.sh
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:45:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:22 run_atlas
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:22 job.xml
[2025-10-13 10:45:49] -rw-r--r-- 2 boinc boinc 220042116 Oct 13 09:22 EVNT.46676267._004231.pool.root.1
[2025-10-13 10:45:49] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:22 shared
[2025-10-13 10:45:49] -rw-r--r-- 2 boinc boinc    569685 Oct 13 09:22 input.tar.gz
[2025-10-13 10:45:49] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:22 start_atlas.sh
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:22 boinc_setup_complete
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc      6439 Oct 13 09:22 init_data.xml
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:22 boinc_lockfile
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:22 pandaJob.out
[2025-10-13 10:45:49] -rw------- 1 boinc boinc    972849 Oct 13 09:22 agis_schedconf.cvmfs.json
[2025-10-13 10:45:49] -rw------- 1 boinc boinc   1560580 Oct 13 09:22 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:45:49] drwx------ 5 boinc boinc      4096 Oct 13 09:22 pilot3
[2025-10-13 10:45:49] -rw------- 1 boinc boinc 194809366 Oct 13 10:44 HITS.46676269._080640.pool.root.1
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc       529 Oct 13 10:44 boinc_task_state.xml
[2025-10-13 10:45:49] -rw------- 1 boinc boinc      1021 Oct 13 10:44 memory_monitor_summary.json
[2025-10-13 10:45:49] -rw------- 1 boinc boinc    242893 Oct 13 10:44 log.46676269._080640.job.log.tgz.1
[2025-10-13 10:45:49] -rw------- 1 boinc boinc      7764 Oct 13 10:44 heartbeat.json
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc        27 Oct 13 10:45 wrapper_checkpoint.txt
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:45 boinc_mmap_file
[2025-10-13 10:45:49] -rw------- 1 boinc boinc        95 Oct 13 10:45 pilot_heartbeat.json
[2025-10-13 10:45:49] -rw------- 1 boinc boinc      4824 Oct 13 10:45 pilotlog.txt
[2025-10-13 10:45:49] -rw------- 1 boinc boinc    724743 Oct 13 10:45 log.46676269._080640.job.log.1
[2025-10-13 10:45:49] -rw------- 1 boinc boinc       357 Oct 13 10:45 output.list
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:45 runtime_log
[2025-10-13 10:45:49] -rw------- 1 boinc boinc    983040 Oct 13 10:45 result.tar.gz
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc      8782 Oct 13 10:45 runtime_log.err
[2025-10-13 10:45:49] -rw------- 1 boinc boinc       659 Oct 13 10:45 5zBMDmnACS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFEkNDmTHMC4m.diag
[2025-10-13 10:45:49] -rw-r--r-- 1 boinc boinc      6669 Oct 13 10:45 stderr.txt
[2025-10-13 10:45:49] HITS file was successfully produced:
[2025-10-13 10:45:49] -rw------- 1 boinc boinc 194809366 Oct 13 10:44 shared/HITS.pool.root.1
[2025-10-13 10:45:49]  *** Contents of shared directory: ***
[2025-10-13 10:45:49] total 406676
[2025-10-13 10:45:49] -rw-r--r-- 2 boinc boinc 220042116 Oct 13 09:22 ATLAS.root_0
[2025-10-13 10:45:49] -rw-r--r-- 2 boinc boinc    569685 Oct 13 09:22 input.tar.gz
[2025-10-13 10:45:49] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:22 start_atlas.sh
[2025-10-13 10:45:49] -rw------- 1 boinc boinc 194809366 Oct 13 10:44 HITS.pool.root.1
[2025-10-13 10:45:49] -rw------- 1 boinc boinc    983040 Oct 13 10:45 result.tar.gz
10:45:51 (2881606): run_atlas exited; CPU time 14156.772662
10:45:51 (2881606): called boinc_finish(0)

</stderr_txt>
]]>

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