Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:21:36 (16680): wrapper (7.7.26015): starting
13:21:36 (16680): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 13:21:36] Arguments: --nthreads 12
[2025-10-12 13:21:36] Threads: 12
[2025-10-12 13:21:36] Checking for CVMFS
[2025-10-12 13:21:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:21:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:21:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:21:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:21:36] 2.11.2.0 2916 223129 100072 151629 1 56 19563127 20275201 1 130560 1 108558949 99.984 13421534 12512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:21:36] CVMFS is ok
[2025-10-12 13:21:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:21:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:21:36] Further information can be found at the LHC@home message board.
[2025-10-12 13:21:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:21:36] Checking for apptainer binary...
[2025-10-12 13:21:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:21:36] Running /usr/bin/apptainer --version
[2025-10-12 13:21:36] apptainer version 1.3.2-1.el7
[2025-10-12 13:21:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:21:38] c-205-23.aglt2.org
[2025-10-12 13:21:38] apptainer works
[2025-10-12 13:21:38] Set ATHENA_PROC_NUMBER=12
[2025-10-12 13:21:38] Set ATHENA_CORE_NUMBER=12
[2025-10-12 13:21:38] Starting ATLAS job with PandaID=6840080956
[2025-10-12 13:21:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:38:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:38:07]  scope=mc23_13p6TeV
[2025-10-12 14:38:07]  status=None
[2025-10-12 14:38:07]  status_code=0
[2025-10-12 14:38:07]  storage_token=
[2025-10-12 14:38:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840080956/log.46676269._079328.job.log.tgz.1
[2025-10-12 14:38:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/cf/log.46676269._079328.job.log.tgz.1
[2025-10-12 14:38:07]  workdir=None
[2025-10-12 14:38:07] ]
[2025-10-12 14:38:07] 2025-10-12 18:37:07,771 | INFO     | transferring file log.46676269._079328.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840080956/log.46676269._079328.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 14:38:07] 2025-10-12 18:37:07,771 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840080956/log.46676269._079328.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._079328.job
[2025-10-12 14:38:07] 2025-10-12 18:37:07,794 | INFO     | adding to output.list: log.46676269._079328.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/cf/log.46676269._079328.job.log.tg
[2025-10-12 14:38:07] 2025-10-12 18:37:07,795 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 14:38:07] 2025-10-12 18:37:07,795 | INFO     | summary of transferred files:
[2025-10-12 14:38:07] 2025-10-12 18:37:07,795 | INFO     |  -- lfn=log.46676269._079328.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 14:38:07] 2025-10-12 18:37:07,796 | INFO     | stage-out finished correctly
[2025-10-12 14:38:07] 2025-10-12 18:37:07,927 | INFO     | time since job start (4514s) is within the limit (172800.0s)
[2025-10-12 14:38:07] 2025-10-12 18:37:09,638 | INFO     | monitor loop #336: job 0:6840080956 is in state 'finished'
[2025-10-12 14:38:07] 2025-10-12 18:37:09,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:38:07] 2025-10-12 18:37:09,674 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:38:07] 2025-10-12 18:37:09,933 | INFO     | time since job start (4516s) is within the limit (172800.0s)
[2025-10-12 14:38:07] 2025-10-12 18:37:11,914 | INFO     | job 6840080956 has state=finished
[2025-10-12 14:38:07] 2025-10-12 18:37:11,914 | INFO     | preparing for final server update for job 6840080956 in state='finished'
[2025-10-12 14:38:07] 2025-10-12 18:37:11,915 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:38:07] 2025-10-12 18:37:11,915 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:38:07] 2025-10-12 18:37:11,915 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:38:07] 2025-10-12 18:37:11,916 | INFO     | job 6840080956 has finished - writing final server update
[2025-10-12 14:38:07] 2025-10-12 18:37:11,916 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:38:07] 2025-10-12 18:37:11,917 | INFO     | executing command: lscpu
[2025-10-12 14:38:07] 2025-10-12 18:37:11,936 | INFO     | time since job start (4518s) is within the limit (172800.0s)
[2025-10-12 14:38:07] 2025-10-12 18:37:11,943 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:38:07] 2025-10-12 18:37:12,142 | INFO     | monitor loop #337: job 0:6840080956 is in state 'finished'
[2025-10-12 14:38:07] 2025-10-12 18:37:12,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:38:07] 2025-10-12 18:37:13,942 | INFO     | time since job start (4520s) is within the limit (172800.0s)
[2025-10-12 14:38:07] 2025-10-12 18:37:14,646 | INFO     | monitor loop #338: job 0:6840080956 is in state 'finished'
[2025-10-12 14:38:07] 2025-10-12 18:37:14,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:38:07] 2025-10-12 18:37:15,947 | INFO     | time since job start (4522s) is within the limit (172800.0s)
[2025-10-12 14:38:07] 2025-10-12 18:37:16,711 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 14:38:07] 2025-10-12 18:37:16,715 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 14:38:07] 2025-10-12 18:37:16,717 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840080956/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:38:07] 2025-10-12 18:37:16,718 | INFO     | extracted standard info from prmon json
[2025-10-12 14:38:07] 2025-10-12 18:37:16,718 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:38:07] 2025-10-12 18:37:16,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:38:07] 2025-10-12 18:37:16,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:38:07] 2025-10-12 18:37:16,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:38:07] 2025-10-12 18:37:16,721 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:38:07] 2025-10-12 18:37:16,721 | INFO     | sum of square deviations: 93240818.0
[2025-10-12 14:38:07] 2025-10-12 18:37:16,721 | INFO     | sum of deviations: -7011290590.000001
[2025-10-12 14:38:07] 2025-10-12 18:37:16,722 | INFO     | mean x: 1760292060.0
[2025-10-12 14:38:07] 2025-10-12 18:37:16,722 | INFO     | mean y: 2773065.7164179105
[2025-10-12 14:38:07] 2025-10-12 18:37:16,722 | INFO     | -- intersect: 132368827125.10614
[2025-10-12 14:38:07] 2025-10-12 18:37:16,722 | INFO     | intersect: 132368827125.10614
[2025-10-12 14:38:07] 2025-10-12 18:37:16,722 | INFO     | chi2: 0.08477549178785282
[2025-10-12 14:38:07] 2025-10-12 18:37:16,722 | INFO     | -- intersect: 132368827125.10614
[2025-10-12 14:38:07] 2025-10-12 18:37:16,722 | INFO     | current memory leak: -75.20 B/s (using 67 data points, chi2=0.08)
[2025-10-12 14:38:07] 2025-10-12 18:37:16,723 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-12 14:38:07] 2025-10-12 18:37:16,723 | INFO     | ..............................
[2025-10-12 14:38:07] 2025-10-12 18:37:16,723 | INFO     | . Timing measurements:
[2025-10-12 14:38:07] 2025-10-12 18:37:16,723 | INFO     | . get job = 0 s
[2025-10-12 14:38:07] 2025-10-12 18:37:16,723 | INFO     | . initial setup = 2 s
[2025-10-12 14:38:07] 2025-10-12 18:37:16,723 | INFO     | . payload setup = 7 s
[2025-10-12 14:38:07] 2025-10-12 18:37:16,723 | INFO     | . stage-in = 0 s
[2025-10-12 14:38:07] 2025-10-12 18:37:16,723 | INFO     | . payload execution = 4486 s
[2025-10-12 14:38:07] 2025-10-12 18:37:16,724 | INFO     | . stage-out = 1 s
[2025-10-12 14:38:07] 2025-10-12 18:37:16,724 | INFO     | . log creation = 0 s
[2025-10-12 14:38:07] 2025-10-12 18:37:16,724 | INFO     | ..............................
[2025-10-12 14:38:07] 2025-10-12 18:37:16,810 | INFO     | 
[2025-10-12 14:38:07] 2025-10-12 18:37:16,810 | INFO     | job summary report
[2025-10-12 14:38:07] 2025-10-12 18:37:16,810 | INFO     | --------------------------------------------------
[2025-10-12 14:38:07] 2025-10-12 18:37:16,810 | INFO     | PanDA job id: 6840080956
[2025-10-12 14:38:07] 2025-10-12 18:37:16,811 | INFO     | task id: 46676269
[2025-10-12 14:38:07] 2025-10-12 18:37:16,811 | INFO     | errors: (none)
[2025-10-12 14:38:07] 2025-10-12 18:37:16,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:38:07] 2025-10-12 18:37:16,811 | INFO     | pilot state: finished 
[2025-10-12 14:38:07] 2025-10-12 18:37:16,811 | INFO     | transexitcode: 0
[2025-10-12 14:38:07] 2025-10-12 18:37:16,811 | INFO     | exeerrorcode: 0
[2025-10-12 14:38:07] 2025-10-12 18:37:16,812 | INFO     | exeerrordiag: 
[2025-10-12 14:38:07] 2025-10-12 18:37:16,812 | INFO     | exitcode: 0
[2025-10-12 14:38:07] 2025-10-12 18:37:16,812 | INFO     | exitmsg: OK
[2025-10-12 14:38:07] 2025-10-12 18:37:16,812 | INFO     | cpuconsumptiontime: 47596 s
[2025-10-12 14:38:07] 2025-10-12 18:37:16,812 | INFO     | nevents: 400
[2025-10-12 14:38:07] 2025-10-12 18:37:16,812 | INFO     | neventsw: 0
[2025-10-12 14:38:07] 2025-10-12 18:37:16,813 | INFO     | pid: 26827
[2025-10-12 14:38:07] 2025-10-12 18:37:16,813 | INFO     | pgrp: 26827
[2025-10-12 14:38:07] 2025-10-12 18:37:16,813 | INFO     | corecount: 12
[2025-10-12 14:38:07] 2025-10-12 18:37:16,813 | INFO     | event service: False
[2025-10-12 14:38:07] 2025-10-12 18:37:16,813 | INFO     | sizes: {0: 2348807, 5: 2349069, 11: 2349125, 4496: 2375203, 4497: 2375202, 4498: 2384284, 4500: 2384468, 4507: 2384662}
[2025-10-12 14:38:07] 2025-10-12 18:37:16,813 | INFO     | --------------------------------------------------
[2025-10-12 14:38:07] 2025-10-12 18:37:16,814 | INFO     | 
[2025-10-12 14:38:07] 2025-10-12 18:37:16,814 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:38:07] 2025-10-12 18:37:16,838 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,838 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,838 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,838 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,839 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,839 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,839 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,840 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,840 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,840 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,840 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,840 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,840 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,840 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,840 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,840 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:38:07] 2025-10-12 18:37:16,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:38:07] 2025-10-12 18:37:16,841 | INFO     | job 6840080956 has completed (purged errors)
[2025-10-12 14:38:07] 2025-10-12 18:37:16,841 | INFO     | overall cleanup function is called
[2025-10-12 14:38:07] 2025-10-12 18:37:17,848 | INFO     | --- collectZombieJob: --- 10, [26827]
[2025-10-12 14:38:07] 2025-10-12 18:37:17,849 | INFO     | zombie collector waiting for pid 26827
[2025-10-12 14:38:07] 2025-10-12 18:37:17,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:38:07] 2025-10-12 18:37:17,849 | INFO     | collected zombie processes
[2025-10-12 14:38:07] 2025-10-12 18:37:17,849 | INFO     | will attempt to kill all subprocesses of pid=26827
[2025-10-12 14:38:07] 2025-10-12 18:37:17,941 | INFO     | process IDs to be killed: [26827] (in reverse order)
[2025-10-12 14:38:07] 2025-10-12 18:37:17,993 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:38:07] 2025-10-12 18:37:17,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:38:07] 2025-10-12 18:37:17,997 | INFO     | did not find any defunct processes belonging to 26827
[2025-10-12 14:38:07] 2025-10-12 18:37:18,000 | INFO     | did not find any defunct processes belonging to 26827
[2025-10-12 14:38:07] 2025-10-12 18:37:18,000 | INFO     | ready for new job
[2025-10-12 14:38:07] 2025-10-12 18:37:18,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:38:07] 2025-10-12 18:37:18,001 | INFO     | ***************************************
[2025-10-12 14:38:07] 2025-10-12 18:37:18,001 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:38:07] 2025-10-12 18:37:18,001 | INFO     | ***************************************
[2025-10-12 14:38:07] 2025-10-12 18:37:18,001 | INFO     | 
[2025-10-12 14:38:07] 2025-10-12 18:37:18,002 | INFO     | architecture information:
[2025-10-12 14:38:07] 2025-10-12 18:37:18,003 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:38:07] 2025-10-12 18:37:18,017 | INFO     | cat /etc/os-release:
[2025-10-12 14:38:07] NAME="CentOS Linux"
[2025-10-12 14:38:07] VERSION="7 (Core)"
[2025-10-12 14:38:07] ID="centos"
[2025-10-12 14:38:07] ID_LIKE="rhel fedora"
[2025-10-12 14:38:07] VERSION_ID="7"
[2025-10-12 14:38:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:38:07] ANSI_COLOR="0;31"
[2025-10-12 14:38:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:38:07] HOME_URL="https://www.centos.org/"
[2025-10-12 14:38:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:38:07] 
[2025-10-12 14:38:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:38:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:38:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:38:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:38:07] 
[2025-10-12 14:38:07] 2025-10-12 18:37:18,017 | INFO     | ***************************************
[2025-10-12 14:38:07] 2025-10-12 18:37:18,520 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:38:07] 2025-10-12 18:37:18,536 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-10-12 14:38:07] 2025-10-12 18:37:18,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:38:07] 2025-10-12 18:37:18,537 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:38:07] 2025-10-12 18:37:18,537 | INFO     | update_server=False
[2025-10-12 14:38:07] 2025-10-12 18:37:18,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:38:07] 2025-10-12 18:37:18,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:38:07] 2025-10-12 18:37:18,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:38:07] 2025-10-12 18:37:18,538 | INFO     | aborting loop
[2025-10-12 14:38:07] 2025-10-12 18:37:18,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:38:07] 2025-10-12 18:37:18,659 | INFO     | all job control threads have been joined
[2025-10-12 14:38:07] 2025-10-12 18:37:18,840 | INFO     | all data control threads have been joined
[2025-10-12 14:38:07] 2025-10-12 18:37:19,543 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:19,543 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:19,544 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:19,664 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:19,664 | INFO     | [job] control thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:19,843 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:19,846 | INFO     | [data] control thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:19,955 | INFO     | all payload control threads have been joined
[2025-10-12 14:38:07] 2025-10-12 18:37:20,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:38:07] 2025-10-12 18:37:20,455 | INFO     | [job] validate thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:20,544 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:20,582 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:20,708 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:20,763 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:20,788 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:20,961 | INFO     | [payload] control thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:24,275 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:28,708 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:38:07] 2025-10-12 18:37:29,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:38:07] 2025-10-12 18:37:49,155 | INFO     | PID=20364 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 14:38:07] 2025-10-12 18:37:49,156 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:38:07] 2025-10-12 18:37:49,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:38:07] 2025-10-12 18:37:49,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:38:07] 2025-10-12 18:38:00,217 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:38:07] 2025-10-12 18:38:01,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819372668736)>', '<ExcThread(monitor, started 139818029807360)>']
[2025-10-12 14:38:07] 2025-10-12 18:38:02,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:38:07] 2025-10-12 18:38:02,222 | INFO     | [monitor] control thread has ended
[2025-10-12 14:38:07] 2025-10-12 18:38:06,839 | INFO     | all workflow threads have been joined
[2025-10-12 14:38:07] 2025-10-12 18:38:06,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:38:07] 2025-10-12 18:38:06,839 | INFO     | traces error code: 0
[2025-10-12 14:38:07] 2025-10-12 18:38:06,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:38:07] 2025-10-12 18:38:06,936 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:38:07] 2025-10-12 18:38:06,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:38:07] 2025-10-12 18:38:06,944 [wrapper] pilotpid: 20364
[2025-10-12 14:38:07] 2025-10-12 18:38:06,948 [wrapper] Pilot exit status: 0
[2025-10-12 14:38:07] 2025-10-12 18:38:06,963 [wrapper] pandaids: 6840080956
[2025-10-12 14:38:07] 2025-10-12 18:38:07,009 [wrapper] cleanup supervisor_pilot  9466 20365
[2025-10-12 14:38:07] 2025-10-12 18:38:07,013 [wrapper] Test setup, not cleaning
[2025-10-12 14:38:07] 2025-10-12 18:38:07,017 [wrapper] apfmon messages muted
[2025-10-12 14:38:07] 2025-10-12 18:38:07,021 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:38:07] 2025-10-12 18:38:07,025 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:38:07]  *** Error codes and diagnostics ***
[2025-10-12 14:38:07]     "exeErrorCode": 0,
[2025-10-12 14:38:07]     "exeErrorDiag": "",
[2025-10-12 14:38:07]     "pilotErrorCode": 0,
[2025-10-12 14:38:07]     "pilotErrorDiag": "",
[2025-10-12 14:38:07]  *** Listing of results directory ***
[2025-10-12 14:38:07] total 416200
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:05 pilot3.tar.gz
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:17 queuedata.json
[2025-10-12 14:38:07] -rwx------ 1 boincer umatlas     36292 Oct 12 09:17 runpilot2-wrapper.sh
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:38:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:21 run_atlas
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:21 job.xml
[2025-10-12 14:38:07] -rw-r--r-- 2 boincer umatlas 219159941 Oct 12 13:21 EVNT.46676267._001462.pool.root.1
[2025-10-12 14:38:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:21 start_atlas.sh
[2025-10-12 14:38:07] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:21 shared
[2025-10-12 14:38:07] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 13:21 input.tar.gz
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:21 boinc_lockfile
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:21 pandaJob.out
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas    975528 Oct 12 13:21 agis_schedconf.cvmfs.json
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas   1560580 Oct 12 13:21 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:38:07] drwx------ 5 boincer umatlas      4096 Oct 12 13:21 pilot3
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas 201011316 Oct 12 14:36 HITS.46676269._079328.pool.root.1
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas        95 Oct 12 14:36 pilot_heartbeat.json
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 14:36 init_data.xml
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas       529 Oct 12 14:36 boinc_task_state.xml
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas      1050 Oct 12 14:37 memory_monitor_summary.json
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas    397895 Oct 12 14:37 log.46676269._079328.job.log.tgz.1
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas      7857 Oct 12 14:37 heartbeat.json
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:37 boinc_mmap_file
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas        27 Oct 12 14:37 wrapper_checkpoint.txt
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas      4818 Oct 12 14:38 pilotlog.txt
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas    656367 Oct 12 14:38 log.46676269._079328.job.log.1
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas       357 Oct 12 14:38 output.list
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:38 runtime_log
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas   1075200 Oct 12 14:38 result.tar.gz
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 14:38 runtime_log.err
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas       659 Oct 12 14:38 KgSLDmO8AS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJzjNDmBFYbKn.diag
[2025-10-12 14:38:07] -rw-r--r-- 1 boincer umatlas     21921 Oct 12 14:38 stderr.txt
[2025-10-12 14:38:07] HITS file was successfully produced:
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas 201011316 Oct 12 14:36 shared/HITS.pool.root.1
[2025-10-12 14:38:07]  *** Contents of shared directory: ***
[2025-10-12 14:38:07] total 411960
[2025-10-12 14:38:07] -rw-r--r-- 2 boincer umatlas 219159941 Oct 12 13:21 ATLAS.root_0
[2025-10-12 14:38:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:21 start_atlas.sh
[2025-10-12 14:38:07] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 13:21 input.tar.gz
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas 201011316 Oct 12 14:36 HITS.pool.root.1
[2025-10-12 14:38:07] -rw------- 1 boincer umatlas   1075200 Oct 12 14:38 result.tar.gz
14:38:08 (16680): run_atlas exited; CPU time 47559.198610
14:38:08 (16680): called boinc_finish(0)

</stderr_txt>
]]>

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