Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:19:44 (3682012): wrapper (7.7.26015): starting
13:19:44 (3682012): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 13:19:44] Arguments: --nthreads 11
[2025-10-12 13:19:44] Threads: 11
[2025-10-12 13:19:44] Checking for CVMFS
[2025-10-12 13:19:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:19:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:19:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:19:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:19:46] 2.13.2.0 2408171 129537 256572 151629 1 66 28402311 32935937 19521 16776704 0 190004484 99.603 207279238 30484 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 13:19:46] CVMFS is ok
[2025-10-12 13:19:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:19:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:19:47] Further information can be found at the LHC@home message board.
[2025-10-12 13:19:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:19:47] Checking for apptainer binary...
[2025-10-12 13:19:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:19:47] Running /usr/bin/apptainer --version
[2025-10-12 13:19:47] apptainer version 1.4.3-1.el9
[2025-10-12 13:19:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:19:47] c6-5-7-3.aglt2.org
[2025-10-12 13:19:47] apptainer works
[2025-10-12 13:19:47] Set ATHENA_PROC_NUMBER=11
[2025-10-12 13:19:47] Set ATHENA_CORE_NUMBER=11
[2025-10-12 13:19:48] Starting ATLAS job with PandaID=6840225859
[2025-10-12 13:19:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:25:23]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:25:23] 2025-10-12 22:24:17,803 | INFO     | monitor loop #1051: job 0:6840225859 is in state 'finished'
[2025-10-12 18:25:23] 2025-10-12 22:24:17,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:25:23] 2025-10-12 22:24:17,805 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2823.169910714286
[2025-10-12 18:25:23] 2025-10-12 22:24:17,832 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6840225859/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:25:23] 2025-10-12 22:24:17,832 | INFO     | extracted standard info from prmon json
[2025-10-12 18:25:23] 2025-10-12 22:24:17,832 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:25:23] 2025-10-12 22:24:17,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:25:23] 2025-10-12 22:24:17,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:25:23] 2025-10-12 22:24:17,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:25:23] 2025-10-12 22:24:17,838 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:25:23] 2025-10-12 22:24:17,839 | INFO     | sum of square deviations: 8042520185.915513
[2025-10-12 18:25:23] 2025-10-12 22:24:17,841 | INFO     | sum of deviations: 24066132709.858128
[2025-10-12 18:25:23] 2025-10-12 22:24:17,841 | INFO     | mean x: 1760298760.266892
[2025-10-12 18:25:23] 2025-10-12 22:24:17,841 | INFO     | mean y: 2241583.128378378
[2025-10-12 18:25:23] 2025-10-12 22:24:17,841 | INFO     | -- intersect: -5265209737.388182
[2025-10-12 18:25:23] 2025-10-12 22:24:17,841 | INFO     | intersect: -5265209737.388182
[2025-10-12 18:25:23] 2025-10-12 22:24:17,842 | INFO     | chi2: 3.2232746861605475
[2025-10-12 18:25:23] 2025-10-12 22:24:17,842 | INFO     | sum of square deviations: 7641840160.109961
[2025-10-12 18:25:23] 2025-10-12 22:24:17,844 | INFO     | sum of deviations: 42047995450.14778
[2025-10-12 18:25:23] 2025-10-12 22:24:17,844 | INFO     | mean x: 1760298607.766323
[2025-10-12 18:25:23] 2025-10-12 22:24:17,844 | INFO     | mean y: 2248343.8109965636
[2025-10-12 18:25:23] 2025-10-12 22:24:17,844 | INFO     | -- intersect: -9683511407.698223
[2025-10-12 18:25:23] 2025-10-12 22:24:17,844 | INFO     | intersect: -9683511407.698223
[2025-10-12 18:25:23] 2025-10-12 22:24:17,845 | INFO     | chi2: 2.5527734434857474
[2025-10-12 18:25:23] 2025-10-12 22:24:17,845 | INFO     | current chi2=2.5527734434857474 (change=20.801864810146782 %)
[2025-10-12 18:25:23] 2025-10-12 22:24:17,845 | INFO     | right removable region: 290
[2025-10-12 18:25:23] 2025-10-12 22:24:17,845 | INFO     | sum of square deviations: 7641773667.924402
[2025-10-12 18:25:23] 2025-10-12 22:24:17,847 | INFO     | sum of deviations: -34178703503.40548
[2025-10-12 18:25:23] 2025-10-12 22:24:17,847 | INFO     | mean x: 1760298912.7800686
[2025-10-12 18:25:23] 2025-10-12 22:24:17,847 | INFO     | mean y: 2263665.274914089
[2025-10-12 18:25:23] 2025-10-12 22:24:17,848 | INFO     | -- intersect: 7875401137.248544
[2025-10-12 18:25:23] 2025-10-12 22:24:17,848 | INFO     | intersect: 7875401137.248544
[2025-10-12 18:25:23] 2025-10-12 22:24:17,848 | INFO     | chi2: 1.1862160921636349
[2025-10-12 18:25:23] 2025-10-12 22:24:17,848 | INFO     | current chi2=1.1862160921636349 (change=63.1984175206422 %)
[2025-10-12 18:25:23] 2025-10-12 22:24:17,849 | INFO     | sum of square deviations: 7254562287.328654
[2025-10-12 18:25:23] 2025-10-12 22:24:17,850 | INFO     | sum of deviations: -45288895068.74827
[2025-10-12 18:25:23] 2025-10-12 22:24:17,851 | INFO     | mean x: 1760299065.2937062
[2025-10-12 18:25:23] 2025-10-12 22:24:17,851 | INFO     | mean y: 2268010.6398601397
[2025-10-12 18:25:23] 2025-10-12 22:24:17,851 | INFO     | -- intersect: 10991490585.3706
[2025-10-12 18:25:23] 2025-10-12 22:24:17,851 | INFO     | intersect: 10991490585.3706
[2025-10-12 18:25:23] 2025-10-12 22:24:17,851 | INFO     | chi2: 1.067517373883437
[2025-10-12 18:25:23] 2025-10-12 22:24:17,851 | INFO     | current chi2=1.067517373883437 (change=10.006500423012625 %)
[2025-10-12 18:25:23] 2025-10-12 22:24:17,851 | INFO     | left removable region: 20
[2025-10-12 18:25:23] 2025-10-12 22:24:17,852 | INFO     | sum of square deviations: 6103866577.866683
[2025-10-12 18:25:23] 2025-10-12 22:24:17,853 | INFO     | sum of deviations: -3265650173.4666715
[2025-10-12 18:25:23] 2025-10-12 22:24:17,853 | INFO     | mean x: 1760299187.3111112
[2025-10-12 18:25:23] 2025-10-12 22:24:17,854 | INFO     | mean y: 2265719.422222222
[2025-10-12 18:25:23] 2025-10-12 22:24:17,854 | INFO     | -- intersect: 944049304.1487571
[2025-10-12 18:25:23] 2025-10-12 22:24:17,854 | INFO     | intersect: 944049304.1487571
[2025-10-12 18:25:23] 2025-10-12 22:24:17,854 | INFO     | chi2: 0.24807053278430383
[2025-10-12 18:25:23] 2025-10-12 22:24:17,854 | INFO     | -- intersect: 944049304.1487571
[2025-10-12 18:25:23] 2025-10-12 22:24:17,854 | INFO     | current memory leak: -0.54 B/s (using 270 data points, chi2=0.25)
[2025-10-12 18:25:23] 2025-10-12 22:24:17,855 | INFO     | could have reported an average CPU frequency of 2746 MHz (13 samples)
[2025-10-12 18:25:23] 2025-10-12 22:24:17,855 | INFO     | ..............................
[2025-10-12 18:25:23] 2025-10-12 22:24:17,855 | INFO     | . Timing measurements:
[2025-10-12 18:25:23] 2025-10-12 22:24:17,855 | INFO     | . get job = 0 s
[2025-10-12 18:25:23] 2025-10-12 22:24:17,855 | INFO     | . initial setup = 4 s
[2025-10-12 18:25:23] 2025-10-12 22:24:17,855 | INFO     | . payload setup = 35 s
[2025-10-12 18:25:23] 2025-10-12 22:24:17,856 | INFO     | . stage-in = 0 s
[2025-10-12 18:25:23] 2025-10-12 22:24:17,856 | INFO     | . payload execution = 18080 s
[2025-10-12 18:25:23] 2025-10-12 22:24:17,856 | INFO     | . stage-out = 3 s
[2025-10-12 18:25:23] 2025-10-12 22:24:17,856 | INFO     | . log creation = 0 s
[2025-10-12 18:25:23] 2025-10-12 22:24:17,856 | INFO     | ..............................
[2025-10-12 18:25:23] 2025-10-12 22:24:18,033 | INFO     | 
[2025-10-12 18:25:23] 2025-10-12 22:24:18,035 | INFO     | job summary report
[2025-10-12 18:25:23] 2025-10-12 22:24:18,035 | INFO     | --------------------------------------------------
[2025-10-12 18:25:23] 2025-10-12 22:24:18,035 | INFO     | PanDA job id: 6840225859
[2025-10-12 18:25:23] 2025-10-12 22:24:18,035 | INFO     | task id: 46676269
[2025-10-12 18:25:23] 2025-10-12 22:24:18,035 | INFO     | errors: (none)
[2025-10-12 18:25:23] 2025-10-12 22:24:18,035 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:25:23] 2025-10-12 22:24:18,035 | INFO     | pilot state: finished 
[2025-10-12 18:25:23] 2025-10-12 22:24:18,036 | INFO     | transexitcode: 0
[2025-10-12 18:25:23] 2025-10-12 22:24:18,036 | INFO     | exeerrorcode: 0
[2025-10-12 18:25:23] 2025-10-12 22:24:18,036 | INFO     | exeerrordiag: 
[2025-10-12 18:25:23] 2025-10-12 22:24:18,036 | INFO     | exitcode: 0
[2025-10-12 18:25:23] 2025-10-12 22:24:18,036 | INFO     | exitmsg: OK
[2025-10-12 18:25:23] 2025-10-12 22:24:18,036 | INFO     | cpuconsumptiontime: 45986 s
[2025-10-12 18:25:23] 2025-10-12 22:24:18,036 | INFO     | nevents: 400
[2025-10-12 18:25:23] 2025-10-12 22:24:18,036 | INFO     | neventsw: 0
[2025-10-12 18:25:23] 2025-10-12 22:24:18,037 | INFO     | pid: 3700699
[2025-10-12 18:25:23] 2025-10-12 22:24:18,037 | INFO     | pgrp: 3700699
[2025-10-12 18:25:23] 2025-10-12 22:24:18,071 | INFO     | corecount: 11
[2025-10-12 18:25:23] 2025-10-12 22:24:18,072 | INFO     | event service: False
[2025-10-12 18:25:23] 2025-10-12 22:24:18,072 | INFO     | sizes: {0: 2348856, 1: 2348856, 12: 2348884, 23: 2348912, 27: 2349202, 34: 2349230, 18120: 2381518, 18126: 2390516, 18129: 2390572, 18156: 2390766}
[2025-10-12 18:25:23] 2025-10-12 22:24:18,072 | INFO     | --------------------------------------------------
[2025-10-12 18:25:23] 2025-10-12 22:24:18,072 | INFO     | 
[2025-10-12 18:25:23] 2025-10-12 22:24:18,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 18:25:23] 2025-10-12 22:24:18,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,235 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,235 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,235 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:25:23] 2025-10-12 22:24:18,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:25:23] 2025-10-12 22:24:18,237 | INFO     | job 6840225859 has completed (purged errors)
[2025-10-12 18:25:23] 2025-10-12 22:24:18,238 | INFO     | overall cleanup function is called
[2025-10-12 18:25:23] 2025-10-12 22:24:19,312 | INFO     | --- collectZombieJob: --- 10, [3700699]
[2025-10-12 18:25:23] 2025-10-12 22:24:19,312 | INFO     | zombie collector waiting for pid 3700699
[2025-10-12 18:25:23] 2025-10-12 22:24:19,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:25:23] 2025-10-12 22:24:19,313 | INFO     | collected zombie processes
[2025-10-12 18:25:23] 2025-10-12 22:24:19,313 | INFO     | will attempt to kill all subprocesses of pid=3700699
[2025-10-12 18:25:23] 2025-10-12 22:24:19,868 | INFO     | PID=3691273 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:25:23] 2025-10-12 22:24:19,868 | INFO     | .. there are 21 such processes running
[2025-10-12 18:25:23] 2025-10-12 22:24:20,463 | INFO     | process IDs to be killed: [3700699] (in reverse order)
[2025-10-12 18:25:23] 2025-10-12 22:24:20,702 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:25:23] 2025-10-12 22:24:20,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:25:23] 2025-10-12 22:24:20,725 | INFO     | did not find any defunct processes belonging to 3700699
[2025-10-12 18:25:23] 2025-10-12 22:24:20,751 | INFO     | did not find any defunct processes belonging to 3700699
[2025-10-12 18:25:23] 2025-10-12 22:24:20,751 | INFO     | ready for new job
[2025-10-12 18:25:23] 2025-10-12 22:24:20,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:25:23] 2025-10-12 22:24:20,759 | INFO     | ***************************************
[2025-10-12 18:25:23] 2025-10-12 22:24:20,759 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:25:23] 2025-10-12 22:24:20,759 | INFO     | ***************************************
[2025-10-12 18:25:23] 2025-10-12 22:24:20,759 | INFO     | 
[2025-10-12 18:25:23] 2025-10-12 22:24:20,776 | INFO     | architecture information:
[2025-10-12 18:25:23] 2025-10-12 22:24:20,781 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:25:23] 2025-10-12 22:24:20,837 | INFO     | cat /etc/os-release:
[2025-10-12 18:25:23] NAME="CentOS Linux"
[2025-10-12 18:25:23] VERSION="7 (Core)"
[2025-10-12 18:25:23] ID="centos"
[2025-10-12 18:25:23] ID_LIKE="rhel fedora"
[2025-10-12 18:25:23] VERSION_ID="7"
[2025-10-12 18:25:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:25:23] ANSI_COLOR="0;31"
[2025-10-12 18:25:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:25:23] HOME_URL="https://www.centos.org/"
[2025-10-12 18:25:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:25:23] 
[2025-10-12 18:25:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:25:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:25:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:25:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:25:23] 
[2025-10-12 18:25:23] 2025-10-12 22:24:20,838 | INFO     | ***************************************
[2025-10-12 18:25:23] 2025-10-12 22:24:21,366 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 18:25:23] 2025-10-12 22:24:21,473 | INFO     | sufficient remaining disk space (75092721664 B)
[2025-10-12 18:25:23] 2025-10-12 22:24:21,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:25:23] 2025-10-12 22:24:21,473 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:25:23] 2025-10-12 22:24:21,473 | INFO     | update_server=False
[2025-10-12 18:25:23] 2025-10-12 22:24:21,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:25:23] 2025-10-12 22:24:21,481 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:25:23] 2025-10-12 22:24:21,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:25:23] 2025-10-12 22:24:21,519 | INFO     | aborting loop
[2025-10-12 18:25:23] 2025-10-12 22:24:21,637 | INFO     | all data control threads have been joined
[2025-10-12 18:25:23] 2025-10-12 22:24:22,264 | INFO     | all job control threads have been joined
[2025-10-12 18:25:23] 2025-10-12 22:24:22,479 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:22,524 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:22,627 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:22,628 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:22,643 | INFO     | [data] control thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:22,742 | INFO     | all payload control threads have been joined
[2025-10-12 18:25:23] 2025-10-12 22:24:22,937 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:23,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:25:23] 2025-10-12 22:24:23,194 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:23,199 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:23,269 | INFO     | [job] control thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:23,526 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:23,746 | INFO     | [job] validate thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:23,748 | INFO     | [payload] control thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:23,754 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:23,827 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:24,069 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:24,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:25:23] 2025-10-12 22:24:28,134 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:25:23] 2025-10-12 22:24:53,758 | INFO     | PID=3691273 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:25:23] 2025-10-12 22:24:53,758 | INFO     | .. there are 21 such processes running
[2025-10-12 18:25:23] 2025-10-12 22:24:53,764 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:25:23] 2025-10-12 22:24:53,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:25:23] 2025-10-12 22:24:53,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:25:23] 2025-10-12 22:25:15,840 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:25:23] 2025-10-12 22:25:16,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481771489088)>', '<ExcThread(monitor, started 140481056990976)>']
[2025-10-12 18:25:23] 2025-10-12 22:25:16,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:25:23] 2025-10-12 22:25:16,953 | INFO     | [monitor] control thread has ended
[2025-10-12 18:25:23] 2025-10-12 22:25:21,259 | INFO     | all workflow threads have been joined
[2025-10-12 18:25:23] 2025-10-12 22:25:21,259 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:25:23] 2025-10-12 22:25:21,260 | INFO     | traces error code: 0
[2025-10-12 18:25:23] 2025-10-12 22:25:21,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:25:23] 2025-10-12 22:25:22,140 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:25:23] 2025-10-12 22:25:22,170 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:25:23] 2025-10-12 22:25:22,209 [wrapper] pilotpid: 3691273
[2025-10-12 18:25:23] 2025-10-12 22:25:22,241 [wrapper] Pilot exit status: 0
[2025-10-12 18:25:23] 2025-10-12 22:25:22,359 [wrapper] pandaids: 6840225859
[2025-10-12 18:25:23] 2025-10-12 22:25:22,998 [wrapper] cleanup supervisor_pilot  217739 3691274
[2025-10-12 18:25:23] 2025-10-12 22:25:23,054 [wrapper] Test setup, not cleaning
[2025-10-12 18:25:23] 2025-10-12 22:25:23,075 [wrapper] apfmon messages muted
[2025-10-12 18:25:23] 2025-10-12 22:25:23,101 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:25:23] 2025-10-12 22:25:23,123 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:25:23]  *** Error codes and diagnostics ***
[2025-10-12 18:25:23]     "exeErrorCode": 0,
[2025-10-12 18:25:23]     "exeErrorDiag": "",
[2025-10-12 18:25:23]     "pilotErrorCode": 0,
[2025-10-12 18:25:23]     "pilotErrorDiag": "",
[2025-10-12 18:25:23]  *** Listing of results directory ***
[2025-10-12 18:25:23] total 417668
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 18:25:23] -rwx------. 1 boincer umatlas     36292 Oct 12 11:58 runpilot2-wrapper.sh
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:58 queuedata.json
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:25:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:19 run_atlas
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:19 job.xml
[2025-10-12 18:25:23] -rw-r--r--. 2 boincer umatlas 218693777 Oct 12 13:19 EVNT.46676267._004598.pool.root.1
[2025-10-12 18:25:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:19 start_atlas.sh
[2025-10-12 18:25:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:19 shared
[2025-10-12 18:25:23] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 13:19 input.tar.gz
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:19 boinc_lockfile
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 13:19 pandaJob.out
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas    975528 Oct 12 13:20 agis_schedconf.cvmfs.json
[2025-10-12 18:25:23] drwx------. 5 boincer umatlas      4096 Oct 12 13:20 pilot3
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 18:20 init_data.xml
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas 199605492 Oct 12 18:21 HITS.46676269._082899.pool.root.1
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas       530 Oct 12 18:22 boinc_task_state.xml
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas      1043 Oct 12 18:23 memory_monitor_summary.json
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas    542894 Oct 12 18:23 log.46676269._082899.job.log.tgz.1
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas      7830 Oct 12 18:24 heartbeat.json
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas        95 Oct 12 18:24 pilot_heartbeat.json
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas      4824 Oct 12 18:25 pilotlog.txt
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:25 boinc_mmap_file
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas        28 Oct 12 18:25 wrapper_checkpoint.txt
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas   2201555 Oct 12 18:25 log.46676269._082899.job.log.1
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas       357 Oct 12 18:25 output.list
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:25 runtime_log
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas   2764800 Oct 12 18:25 result.tar.gz
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 18:25 runtime_log.err
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas       656 Oct 12 18:25 3PyLDmXdDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmdMUMDmNmmnkn.diag
[2025-10-12 18:25:23] -rw-r--r--. 1 boincer umatlas     21340 Oct 12 18:25 stderr.txt
[2025-10-12 18:25:23] HITS file was successfully produced:
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas 199605492 Oct 12 18:21 shared/HITS.pool.root.1
[2025-10-12 18:25:23]  *** Contents of shared directory: ***
[2025-10-12 18:25:23] total 411780
[2025-10-12 18:25:23] -rw-r--r--. 2 boincer umatlas 218693777 Oct 12 13:19 ATLAS.root_0
[2025-10-12 18:25:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:19 start_atlas.sh
[2025-10-12 18:25:23] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 13:19 input.tar.gz
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas 199605492 Oct 12 18:21 HITS.pool.root.1
[2025-10-12 18:25:23] -rw-------. 1 boincer umatlas   2764800 Oct 12 18:25 result.tar.gz
18:25:24 (3682012): run_atlas exited; CPU time 46509.988574
18:25:24 (3682012): called boinc_finish(0)

</stderr_txt>
]]>

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