Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:03:26 (1945455): wrapper (7.7.26015): starting
23:03:26 (1945455): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 23:03:26] Arguments: --nthreads 12
[2025-10-12 23:03:26] Threads: 12
[2025-10-12 23:03:26] Checking for CVMFS
[2025-10-12 23:03:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:03:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:03:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:03:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:03:26] 2.13.2.0 8715 29563 234988 151636 3 188 40381890 46080001 6445 130560 0 200117734 99.890 56051055 21598 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-12 23:03:26] CVMFS is ok
[2025-10-12 23:03:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:03:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:03:26] Further information can be found at the LHC@home message board.
[2025-10-12 23:03:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:03:26] Checking for apptainer binary...
[2025-10-12 23:03:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:03:26] Running /usr/bin/apptainer --version
[2025-10-12 23:03:26] apptainer version 1.4.2-1.el9
[2025-10-12 23:03:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:03:26] mff2104.farm.particle.cz
[2025-10-12 23:03:26] apptainer works
[2025-10-12 23:03:26] Set ATHENA_PROC_NUMBER=12
[2025-10-12 23:03:26] Set ATHENA_CORE_NUMBER=12
[2025-10-12 23:03:26] Starting ATLAS job with PandaID=6839928196
[2025-10-12 23:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:00:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:00:09]  replicas=None
[2025-10-13 00:00:09]  scope=mc23_13p6TeV
[2025-10-13 00:00:09]  status=None
[2025-10-13 00:00:09]  status_code=0
[2025-10-13 00:00:09]  storage_token=
[2025-10-13 00:00:09]  surl=/scratch/.boinc/slots/6/PanDA_Pilot-6839928196/log.46676269._077635.job.log.tgz.1
[2025-10-13 00:00:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/96/log.46676269._077635.job.log.tgz.1
[2025-10-13 00:00:09]  workdir=None
[2025-10-13 00:00:09] ]
[2025-10-13 00:00:09] 2025-10-12 21:59:28,800 | INFO     | transferring file log.46676269._077635.job.log.tgz.1 from /scratch/.boinc/slots/6/PanDA_Pilot-6839928196/log.46676269._077635.job.log.tgz.1 to /scratch/.boinc/slot
[2025-10-13 00:00:09] 2025-10-12 21:59:28,800 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/6/PanDA_Pilot-6839928196/log.46676269._077635.job.log.tgz.1 /scratch/.boinc/slots/6/log.46676269._077635.j
[2025-10-13 00:00:09] 2025-10-12 21:59:28,828 | INFO     | adding to output.list: log.46676269._077635.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/96/log.46676269._077635.job.log.tg
[2025-10-13 00:00:09] 2025-10-12 21:59:28,829 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:00:09] 2025-10-12 21:59:28,829 | INFO     | summary of transferred files:
[2025-10-13 00:00:09] 2025-10-12 21:59:28,829 | INFO     |  -- lfn=log.46676269._077635.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:00:09] 2025-10-12 21:59:28,830 | INFO     | stage-out finished correctly
[2025-10-13 00:00:09] 2025-10-12 21:59:28,924 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:00:09] 2025-10-12 21:59:30,126 | INFO     | time since job start (3351s) is within the limit (172800.0s)
[2025-10-13 00:00:09] 2025-10-12 21:59:31,891 | INFO     | job 6839928196 has state=finished
[2025-10-13 00:00:09] 2025-10-12 21:59:31,892 | INFO     | preparing for final server update for job 6839928196 in state='finished'
[2025-10-13 00:00:09] 2025-10-12 21:59:31,892 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:00:09] 2025-10-12 21:59:31,892 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:00:09] 2025-10-12 21:59:31,892 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:00:09] 2025-10-12 21:59:31,893 | INFO     | job 6839928196 has finished - writing final server update
[2025-10-13 00:00:09] 2025-10-12 21:59:31,893 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:00:09] 2025-10-12 21:59:31,894 | INFO     | executing command: lscpu
[2025-10-13 00:00:09] 2025-10-12 21:59:31,971 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:00:09] 2025-10-12 21:59:32,136 | INFO     | time since job start (3353s) is within the limit (172800.0s)
[2025-10-13 00:00:09] 2025-10-12 21:59:32,343 | WARNING  | process 1956613 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 00:00:09] 2025-10-12 21:59:32,344 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6839928196/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:00:09] 2025-10-12 21:59:32,678 | INFO     | number of running child processes to parent process 1956613: 1
[2025-10-13 00:00:09] 2025-10-12 21:59:32,678 | INFO     | maximum number of monitored processes: 6
[2025-10-13 00:00:09] 2025-10-12 21:59:34,142 | INFO     | time since job start (3355s) is within the limit (172800.0s)
[2025-10-13 00:00:09] 2025-10-12 21:59:35,181 | INFO     | monitor loop #242: job 0:6839928196 is in state 'finished'
[2025-10-13 00:00:09] 2025-10-12 21:59:35,182 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:00:09] 2025-10-12 21:59:36,147 | INFO     | time since job start (3357s) is within the limit (172800.0s)
[2025-10-13 00:00:09] 2025-10-12 21:59:36,925 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:00:09] 2025-10-12 21:59:36,940 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2704.6584166666657
[2025-10-13 00:00:09] 2025-10-12 21:59:36,957 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6839928196/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:00:09] 2025-10-12 21:59:36,958 | INFO     | extracted standard info from prmon json
[2025-10-13 00:00:09] 2025-10-12 21:59:36,958 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:00:09] 2025-10-12 21:59:36,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:00:09] 2025-10-12 21:59:36,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:00:09] 2025-10-12 21:59:36,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:00:09] 2025-10-12 21:59:36,960 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:00:09] 2025-10-12 21:59:36,960 | INFO     | sum of square deviations: 34277852.0
[2025-10-13 00:00:09] 2025-10-12 21:59:36,961 | INFO     | sum of deviations: 519957930.4999998
[2025-10-13 00:00:09] 2025-10-12 21:59:36,961 | INFO     | mean x: 1760304787.5
[2025-10-13 00:00:09] 2025-10-12 21:59:36,961 | INFO     | mean y: 2685374.2708333335
[2025-10-13 00:00:09] 2025-10-12 21:59:36,961 | INFO     | -- intersect: -26699233822.93388
[2025-10-13 00:00:09] 2025-10-12 21:59:36,961 | INFO     | intersect: -26699233822.93388
[2025-10-13 00:00:09] 2025-10-12 21:59:36,961 | INFO     | chi2: 0.00101080048395353
[2025-10-13 00:00:09] 2025-10-12 21:59:36,961 | INFO     | -- intersect: -26699233822.93388
[2025-10-13 00:00:09] 2025-10-12 21:59:36,961 | INFO     | current memory leak: 15.17 B/s (using 48 data points, chi2=0.00)
[2025-10-13 00:00:09] 2025-10-12 21:59:36,961 | INFO     | could have reported an average CPU frequency of 2743 MHz (5 samples)
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | ..............................
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | . Timing measurements:
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | . get job = 0 s
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | . initial setup = 1 s
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | . payload setup = 6 s
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | . stage-in = 0 s
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | . payload execution = 3321 s
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | . stage-out = 0 s
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | . log creation = 0 s
[2025-10-13 00:00:09] 2025-10-12 21:59:36,962 | INFO     | ..............................
[2025-10-13 00:00:09] 2025-10-12 21:59:37,054 | INFO     | 
[2025-10-13 00:00:09] 2025-10-12 21:59:37,055 | INFO     | job summary report
[2025-10-13 00:00:09] 2025-10-12 21:59:37,055 | INFO     | --------------------------------------------------
[2025-10-13 00:00:09] 2025-10-12 21:59:37,055 | INFO     | PanDA job id: 6839928196
[2025-10-13 00:00:09] 2025-10-12 21:59:37,055 | INFO     | task id: 46676269
[2025-10-13 00:00:09] 2025-10-12 21:59:37,055 | INFO     | errors: (none)
[2025-10-13 00:00:09] 2025-10-12 21:59:37,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:00:09] 2025-10-12 21:59:37,055 | INFO     | pilot state: finished 
[2025-10-13 00:00:09] 2025-10-12 21:59:37,055 | INFO     | transexitcode: 0
[2025-10-13 00:00:09] 2025-10-12 21:59:37,055 | INFO     | exeerrorcode: 0
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | exeerrordiag: 
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | exitcode: 0
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | exitmsg: OK
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | cpuconsumptiontime: 34588 s
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | nevents: 400
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | neventsw: 0
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | pid: 1956613
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | pgrp: 1956613
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | corecount: 12
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | event service: False
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | sizes: {0: 2348744, 1: 2348886, 6: 2349148, 11: 2349176, 3332: 2374741, 3333: 2383925, 3341: 2384095}
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | --------------------------------------------------
[2025-10-13 00:00:09] 2025-10-12 21:59:37,056 | INFO     | 
[2025-10-13 00:00:09] 2025-10-12 21:59:37,057 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-10-13 00:00:09] 2025-10-12 21:59:37,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,085 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:00:09] 2025-10-12 21:59:37,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:00:09] 2025-10-12 21:59:37,086 | INFO     | job 6839928196 has completed (purged errors)
[2025-10-13 00:00:09] 2025-10-12 21:59:37,086 | INFO     | overall cleanup function is called
[2025-10-13 00:00:09] 2025-10-12 21:59:38,095 | INFO     | --- collectZombieJob: --- 10, [1956613]
[2025-10-13 00:00:09] 2025-10-12 21:59:38,096 | INFO     | zombie collector waiting for pid 1956613
[2025-10-13 00:00:09] 2025-10-12 21:59:38,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:00:09] 2025-10-12 21:59:38,096 | INFO     | collected zombie processes
[2025-10-13 00:00:09] 2025-10-12 21:59:38,096 | INFO     | will attempt to kill all subprocesses of pid=1956613
[2025-10-13 00:00:09] 2025-10-12 21:59:38,444 | INFO     | process IDs to be killed: [1956613] (in reverse order)
[2025-10-13 00:00:09] 2025-10-12 21:59:38,596 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:00:09] 2025-10-12 21:59:38,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:00:09] 2025-10-12 21:59:38,608 | INFO     | did not find any defunct processes belonging to 1956613
[2025-10-13 00:00:09] 2025-10-12 21:59:38,618 | INFO     | did not find any defunct processes belonging to 1956613
[2025-10-13 00:00:09] 2025-10-12 21:59:38,618 | INFO     | ready for new job
[2025-10-13 00:00:09] 2025-10-12 21:59:38,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:00:09] 2025-10-12 21:59:38,620 | INFO     | ***************************************
[2025-10-13 00:00:09] 2025-10-12 21:59:38,620 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:00:09] 2025-10-12 21:59:38,620 | INFO     | ***************************************
[2025-10-13 00:00:09] 2025-10-12 21:59:38,620 | INFO     | 
[2025-10-13 00:00:09] 2025-10-12 21:59:38,626 | INFO     | architecture information:
[2025-10-13 00:00:09] 2025-10-12 21:59:38,627 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:00:09] 2025-10-12 21:59:38,645 | INFO     | cat /etc/os-release:
[2025-10-13 00:00:09] NAME="CentOS Linux"
[2025-10-13 00:00:09] VERSION="7 (Core)"
[2025-10-13 00:00:09] ID="centos"
[2025-10-13 00:00:09] ID_LIKE="rhel fedora"
[2025-10-13 00:00:09] VERSION_ID="7"
[2025-10-13 00:00:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:00:09] ANSI_COLOR="0;31"
[2025-10-13 00:00:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:00:09] HOME_URL="https://www.centos.org/"
[2025-10-13 00:00:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:00:09] 
[2025-10-13 00:00:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:00:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:00:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:00:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:00:09] 
[2025-10-13 00:00:09] 2025-10-12 21:59:38,645 | INFO     | ***************************************
[2025-10-13 00:00:09] 2025-10-12 21:59:39,149 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-10-13 00:00:09] 2025-10-12 21:59:39,169 | INFO     | sufficient remaining disk space (1681407344640 B)
[2025-10-13 00:00:09] 2025-10-12 21:59:39,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:00:09] 2025-10-12 21:59:39,169 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:00:09] 2025-10-12 21:59:39,169 | INFO     | update_server=False
[2025-10-13 00:00:09] 2025-10-12 21:59:39,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:00:09] 2025-10-12 21:59:39,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:00:09] 2025-10-12 21:59:39,170 | INFO     | aborting loop
[2025-10-13 00:00:09] 2025-10-12 21:59:39,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:00:09] 2025-10-12 21:59:39,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:00:09] 2025-10-12 21:59:39,986 | INFO     | all data control threads have been joined
[2025-10-13 00:00:09] 2025-10-12 21:59:40,139 | INFO     | all payload control threads have been joined
[2025-10-13 00:00:09] 2025-10-12 21:59:40,175 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:40,176 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:40,237 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:40,295 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:40,575 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:40,575 | INFO     | [job] validate thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:40,793 | INFO     | all job control threads have been joined
[2025-10-13 00:00:09] 2025-10-12 21:59:40,863 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:40,947 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:40,984 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:40,992 | INFO     | [data] control thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:41,145 | INFO     | [payload] control thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:41,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:41,444 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:41,794 | INFO     | [job] control thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:42,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:00:09] 2025-10-12 21:59:43,071 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:43,537 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:00:09] 2025-10-12 21:59:43,894 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:00:09] 2025-10-12 21:59:45,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857193924416)>', '<ExcThread(monitor, started 139856407684864)>']
[2025-10-13 00:00:09] 2025-10-12 21:59:50,338 | INFO     | all workflow threads have been joined
[2025-10-13 00:00:09] 2025-10-12 21:59:50,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:00:09] 2025-10-12 21:59:50,338 | INFO     | traces error code: 0
[2025-10-13 00:00:09] 2025-10-12 21:59:50,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:00:09] 2025-10-12 22:00:09,641 | INFO     | PID=1949519 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:00:09] 2025-10-12 22:00:09,641 | INFO     | .. there are 8 such processes running
[2025-10-13 00:00:09] 2025-10-12 22:00:09,642 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:00:09] 2025-10-12 22:00:09,642 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:00:09] 2025-10-12 22:00:09,642 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:00:09] 2025-10-12 22:00:09,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:00:09] 2025-10-12 22:00:09,642 | INFO     | [monitor] control thread has ended
[2025-10-13 00:00:09] 2025-10-12 22:00:09,789 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:00:09] 2025-10-12 22:00:09,793 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:00:09] 2025-10-12 22:00:09,796 [wrapper] pilotpid: 1949519
[2025-10-13 00:00:09] 2025-10-12 22:00:09,799 [wrapper] Pilot exit status: 0
[2025-10-13 00:00:09] 2025-10-12 22:00:09,812 [wrapper] pandaids: 6839928196
[2025-10-13 00:00:09] 2025-10-12 22:00:09,891 [wrapper] cleanup supervisor_pilot 2093654 1949520
[2025-10-13 00:00:09] 2025-10-12 22:00:09,894 [wrapper] Test setup, not cleaning
[2025-10-13 00:00:09] 2025-10-12 22:00:09,898 [wrapper] apfmon messages muted
[2025-10-13 00:00:09] 2025-10-12 22:00:09,901 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:00:09] 2025-10-12 22:00:09,905 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:00:09]  *** Error codes and diagnostics ***
[2025-10-13 00:00:09]     "exeErrorCode": 0,
[2025-10-13 00:00:09]     "exeErrorDiag": "",
[2025-10-13 00:00:09]     "pilotErrorCode": 0,
[2025-10-13 00:00:09]     "pilotErrorDiag": "",
[2025-10-13 00:00:09]  *** Listing of results directory ***
[2025-10-13 00:00:09] total 412736
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc    557409 Oct 12 13:54 pilot3.tar.gz
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:05 queuedata.json
[2025-10-13 00:00:09] -rwx------ 1 boinc boinc     36292 Oct 12 14:06 runpilot2-wrapper.sh
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:00:09] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:03 run_atlas
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:03 job.xml
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc      6665 Oct 12 23:03 init_data.xml
[2025-10-13 00:00:09] -rw-r--r-- 2 boinc boinc 221723457 Oct 12 23:03 EVNT.46676267._003720.pool.root.1
[2025-10-13 00:00:09] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:03 start_atlas.sh
[2025-10-13 00:00:09] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:03 shared
[2025-10-13 00:00:09] -rw-r--r-- 2 boinc boinc    569681 Oct 12 23:03 input.tar.gz
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:03 boinc_lockfile
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc      2550 Oct 12 23:03 pandaJob.out
[2025-10-13 00:00:09] -rw------- 1 boinc boinc    975536 Oct 12 23:03 agis_schedconf.cvmfs.json
[2025-10-13 00:00:09] -rw------- 1 boinc boinc   1560580 Oct 12 23:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:00:09] drwx------ 5 boinc boinc      4096 Oct 12 23:03 pilot3
[2025-10-13 00:00:09] -rw------- 1 boinc boinc 195292305 Oct 12 23:58 HITS.46676269._077635.pool.root.1
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc       530 Oct 12 23:59 boinc_task_state.xml
[2025-10-13 00:00:09] -rw------- 1 boinc boinc      1021 Oct 12 23:59 memory_monitor_summary.json
[2025-10-13 00:00:09] -rw------- 1 boinc boinc    361060 Oct 12 23:59 log.46676269._077635.job.log.tgz.1
[2025-10-13 00:00:09] -rw------- 1 boinc boinc      7781 Oct 12 23:59 heartbeat.json
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:00 wrapper_checkpoint.txt
[2025-10-13 00:00:09] -rw------- 1 boinc boinc        95 Oct 13 00:00 pilot_heartbeat.json
[2025-10-13 00:00:09] -rw------- 1 boinc boinc       822 Oct 13 00:00 pilotlog.txt
[2025-10-13 00:00:09] -rw------- 1 boinc boinc    502025 Oct 13 00:00 log.46676269._077635.job.log.1
[2025-10-13 00:00:09] -rw------- 1 boinc boinc       357 Oct 13 00:00 output.list
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:00 runtime_log
[2025-10-13 00:00:09] -rw------- 1 boinc boinc    880640 Oct 13 00:00 result.tar.gz
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:00 boinc_mmap_file
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc      8764 Oct 13 00:00 runtime_log.err
[2025-10-13 00:00:09] -rw------- 1 boinc boinc       663 Oct 13 00:00 2c3MDm109R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmupTMDmIPSuLo.diag
[2025-10-13 00:00:09] -rw-r--r-- 1 boinc boinc     21879 Oct 13 00:00 stderr.txt
[2025-10-13 00:00:10] HITS file was successfully produced:
[2025-10-13 00:00:10] -rw------- 1 boinc boinc 195292305 Oct 12 23:58 shared/HITS.pool.root.1
[2025-10-13 00:00:10]  *** Contents of shared directory: ***
[2025-10-13 00:00:10] total 408688
[2025-10-13 00:00:10] -rw-r--r-- 2 boinc boinc 221723457 Oct 12 23:03 ATLAS.root_0
[2025-10-13 00:00:10] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:03 start_atlas.sh
[2025-10-13 00:00:10] -rw-r--r-- 2 boinc boinc    569681 Oct 12 23:03 input.tar.gz
[2025-10-13 00:00:10] -rw------- 1 boinc boinc 195292305 Oct 12 23:58 HITS.pool.root.1
[2025-10-13 00:00:10] -rw------- 1 boinc boinc    880640 Oct 13 00:00 result.tar.gz
00:00:11 (1945455): run_atlas exited; CPU time 34661.882200
00:00:11 (1945455): called boinc_finish(0)

</stderr_txt>
]]>

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