Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:19:13 (1975219): wrapper (7.7.26015): starting
23:19:13 (1975219): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 23:19:13] Arguments: --nthreads 12
[2025-10-12 23:19:13] Threads: 12
[2025-10-12 23:19:13] Checking for CVMFS
[2025-10-12 23:19:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:19:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:19:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:19:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:19:14] 2.13.2.0 8715 29579 234512 151638 3 57 40389438 46080000 6454 130560 0 200180412 99.890 56053772 21598 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-12 23:19:14] CVMFS is ok
[2025-10-12 23:19:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:19:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:19:14] Further information can be found at the LHC@home message board.
[2025-10-12 23:19:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:19:14] Checking for apptainer binary...
[2025-10-12 23:19:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:19:14] Running /usr/bin/apptainer --version
[2025-10-12 23:19:14] apptainer version 1.4.2-1.el9
[2025-10-12 23:19:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:19:14] mff2104.farm.particle.cz
[2025-10-12 23:19:14] apptainer works
[2025-10-12 23:19:14] Set ATHENA_PROC_NUMBER=12
[2025-10-12 23:19:14] Set ATHENA_CORE_NUMBER=12
[2025-10-12 23:19:14] Starting ATLAS job with PandaID=6840082419
[2025-10-12 23:19:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:15:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:15:38] 2025-10-12 22:14:40,669 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/0/PanDA_Pilot-6840082419/log.46676269._080177.job.log.tgz.1 /scratch/.boinc/slots/0/log.46676269._080177.j
[2025-10-13 00:15:38] 2025-10-12 22:14:40,693 | INFO     | adding to output.list: log.46676269._080177.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/e7/log.46676269._080177.job.log.tg
[2025-10-13 00:15:38] 2025-10-12 22:14:40,695 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:15:38] 2025-10-12 22:14:40,695 | INFO     | summary of transferred files:
[2025-10-13 00:15:38] 2025-10-12 22:14:40,695 | INFO     |  -- lfn=log.46676269._080177.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:15:38] 2025-10-12 22:14:40,695 | INFO     | stage-out finished correctly
[2025-10-13 00:15:38] 2025-10-12 22:14:42,033 | INFO     | monitor loop #240: job 0:6840082419 is in state 'finished'
[2025-10-13 00:15:38] 2025-10-12 22:14:42,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:15:38] 2025-10-12 22:14:42,220 | INFO     | time since job start (3317s) is within the limit (172800.0s)
[2025-10-13 00:15:38] 2025-10-12 22:14:43,743 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:15:38] 2025-10-12 22:14:44,225 | INFO     | time since job start (3319s) is within the limit (172800.0s)
[2025-10-13 00:15:38] 2025-10-12 22:14:44,538 | INFO     | monitor loop #241: job 0:6840082419 is in state 'finished'
[2025-10-13 00:15:38] 2025-10-12 22:14:44,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:15:38] 2025-10-12 22:14:46,229 | INFO     | time since job start (3321s) is within the limit (172800.0s)
[2025-10-13 00:15:38] 2025-10-12 22:14:46,555 | INFO     | job 6840082419 has state=finished
[2025-10-13 00:15:38] 2025-10-12 22:14:46,556 | INFO     | preparing for final server update for job 6840082419 in state='finished'
[2025-10-13 00:15:38] 2025-10-12 22:14:46,556 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:15:38] 2025-10-12 22:14:46,557 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:15:38] 2025-10-12 22:14:46,557 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:15:38] 2025-10-12 22:14:46,557 | INFO     | job 6840082419 has finished - writing final server update
[2025-10-13 00:15:38] 2025-10-12 22:14:46,557 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:15:38] 2025-10-12 22:14:46,558 | INFO     | executing command: lscpu
[2025-10-13 00:15:38] 2025-10-12 22:14:46,639 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:15:38] 2025-10-12 22:14:47,043 | INFO     | monitor loop #242: job 0:6840082419 is in state 'finished'
[2025-10-13 00:15:38] 2025-10-12 22:14:47,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:15:38] 2025-10-12 22:14:48,234 | INFO     | time since job start (3323s) is within the limit (172800.0s)
[2025-10-13 00:15:38] 2025-10-12 22:14:49,547 | INFO     | monitor loop #243: job 0:6840082419 is in state 'finished'
[2025-10-13 00:15:38] 2025-10-12 22:14:49,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:15:38] 2025-10-12 22:14:50,239 | INFO     | time since job start (3325s) is within the limit (172800.0s)
[2025-10-13 00:15:38] 2025-10-12 22:14:51,654 | INFO     | PID=1979274 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 00:15:38] 2025-10-12 22:14:51,654 | INFO     | .. there are 8 such processes running
[2025-10-13 00:15:38] 2025-10-12 22:14:52,051 | INFO     | monitor loop #244: job 0:6840082419 is in state 'finished'
[2025-10-13 00:15:38] 2025-10-12 22:14:52,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:15:38] 2025-10-12 22:14:52,248 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 00:15:38] 2025-10-12 22:14:52,264 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2783.789833333333
[2025-10-13 00:15:38] 2025-10-12 22:14:52,282 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6840082419/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:15:38] 2025-10-12 22:14:52,283 | INFO     | extracted standard info from prmon json
[2025-10-13 00:15:38] 2025-10-12 22:14:52,283 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:15:38] 2025-10-12 22:14:52,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:15:38] 2025-10-12 22:14:52,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:15:38] 2025-10-12 22:14:52,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:15:38] 2025-10-12 22:14:52,285 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:15:38] 2025-10-12 22:14:52,285 | INFO     | sum of square deviations: 32179208.0
[2025-10-13 00:15:38] 2025-10-12 22:14:52,285 | INFO     | sum of deviations: -1277500552.0000005
[2025-10-13 00:15:38] 2025-10-12 22:14:52,285 | INFO     | mean x: 1760305704.0
[2025-10-13 00:15:38] 2025-10-12 22:14:52,285 | INFO     | mean y: 2760766.14893617
[2025-10-13 00:15:38] 2025-10-12 22:14:52,286 | INFO     | -- intersect: 69886131063.78801
[2025-10-13 00:15:38] 2025-10-12 22:14:52,286 | INFO     | intersect: 69886131063.78801
[2025-10-13 00:15:38] 2025-10-12 22:14:52,286 | INFO     | chi2: 0.0013777638695113238
[2025-10-13 00:15:38] 2025-10-12 22:14:52,286 | INFO     | -- intersect: 69886131063.78801
[2025-10-13 00:15:38] 2025-10-12 22:14:52,286 | INFO     | current memory leak: -39.70 B/s (using 47 data points, chi2=0.00)
[2025-10-13 00:15:38] 2025-10-12 22:14:52,286 | INFO     | could have reported an average CPU frequency of 2765 MHz (5 samples)
[2025-10-13 00:15:38] 2025-10-12 22:14:52,286 | INFO     | ..............................
[2025-10-13 00:15:38] 2025-10-12 22:14:52,286 | INFO     | . Timing measurements:
[2025-10-13 00:15:38] 2025-10-12 22:14:52,287 | INFO     | . get job = 0 s
[2025-10-13 00:15:38] 2025-10-12 22:14:52,287 | INFO     | . initial setup = 1 s
[2025-10-13 00:15:38] 2025-10-12 22:14:52,287 | INFO     | . payload setup = 7 s
[2025-10-13 00:15:38] 2025-10-12 22:14:52,287 | INFO     | . stage-in = 0 s
[2025-10-13 00:15:38] 2025-10-12 22:14:52,287 | INFO     | . payload execution = 3286 s
[2025-10-13 00:15:38] 2025-10-12 22:14:52,287 | INFO     | . stage-out = 0 s
[2025-10-13 00:15:38] 2025-10-12 22:14:52,287 | INFO     | . log creation = 0 s
[2025-10-13 00:15:38] 2025-10-12 22:14:52,287 | INFO     | ..............................
[2025-10-13 00:15:38] 2025-10-12 22:14:52,382 | INFO     | 
[2025-10-13 00:15:38] 2025-10-12 22:14:52,382 | INFO     | job summary report
[2025-10-13 00:15:38] 2025-10-12 22:14:52,382 | INFO     | --------------------------------------------------
[2025-10-13 00:15:38] 2025-10-12 22:14:52,382 | INFO     | PanDA job id: 6840082419
[2025-10-13 00:15:38] 2025-10-12 22:14:52,382 | INFO     | task id: 46676269
[2025-10-13 00:15:38] 2025-10-12 22:14:52,382 | INFO     | errors: (none)
[2025-10-13 00:15:38] 2025-10-12 22:14:52,382 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:15:38] 2025-10-12 22:14:52,382 | INFO     | pilot state: finished 
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | transexitcode: 0
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | exeerrorcode: 0
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | exeerrordiag: 
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | exitcode: 0
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | exitmsg: OK
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | cpuconsumptiontime: 34748 s
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | nevents: 400
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | neventsw: 0
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | pid: 1986315
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | pgrp: 1986315
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | corecount: 12
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | event service: False
[2025-10-13 00:15:38] 2025-10-12 22:14:52,383 | INFO     | sizes: {0: 2348858, 6: 2349120, 11: 2349148, 3297: 2374741, 3299: 2383741, 3302: 2383797, 3310: 2384151}
[2025-10-13 00:15:38] 2025-10-12 22:14:52,384 | INFO     | --------------------------------------------------
[2025-10-13 00:15:38] 2025-10-12 22:14:52,384 | INFO     | 
[2025-10-13 00:15:38] 2025-10-12 22:14:52,384 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-10-13 00:15:38] 2025-10-12 22:14:52,408 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,408 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,410 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,410 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:15:38] 2025-10-12 22:14:52,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,410 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:15:38] 2025-10-12 22:14:52,410 | INFO     | job 6840082419 has completed (purged errors)
[2025-10-13 00:15:38] 2025-10-12 22:14:52,411 | INFO     | overall cleanup function is called
[2025-10-13 00:15:38] 2025-10-12 22:14:53,420 | INFO     | --- collectZombieJob: --- 10, [1986315]
[2025-10-13 00:15:38] 2025-10-12 22:14:53,420 | INFO     | zombie collector waiting for pid 1986315
[2025-10-13 00:15:38] 2025-10-12 22:14:53,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:15:38] 2025-10-12 22:14:53,421 | INFO     | collected zombie processes
[2025-10-13 00:15:38] 2025-10-12 22:14:53,421 | INFO     | will attempt to kill all subprocesses of pid=1986315
[2025-10-13 00:15:38] 2025-10-12 22:14:53,772 | INFO     | process IDs to be killed: [1986315] (in reverse order)
[2025-10-13 00:15:38] 2025-10-12 22:14:53,888 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:15:38] 2025-10-12 22:14:53,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:15:38] 2025-10-12 22:14:53,900 | INFO     | did not find any defunct processes belonging to 1986315
[2025-10-13 00:15:38] 2025-10-12 22:14:53,911 | INFO     | did not find any defunct processes belonging to 1986315
[2025-10-13 00:15:38] 2025-10-12 22:14:53,911 | INFO     | ready for new job
[2025-10-13 00:15:38] 2025-10-12 22:14:53,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:15:38] 2025-10-12 22:14:53,913 | INFO     | ***************************************
[2025-10-13 00:15:38] 2025-10-12 22:14:53,913 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:15:38] 2025-10-12 22:14:53,913 | INFO     | ***************************************
[2025-10-13 00:15:38] 2025-10-12 22:14:53,913 | INFO     | 
[2025-10-13 00:15:38] 2025-10-12 22:14:53,920 | INFO     | architecture information:
[2025-10-13 00:15:38] 2025-10-12 22:14:53,920 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:15:38] 2025-10-12 22:14:53,941 | INFO     | cat /etc/os-release:
[2025-10-13 00:15:38] NAME="CentOS Linux"
[2025-10-13 00:15:38] VERSION="7 (Core)"
[2025-10-13 00:15:38] ID="centos"
[2025-10-13 00:15:38] ID_LIKE="rhel fedora"
[2025-10-13 00:15:38] VERSION_ID="7"
[2025-10-13 00:15:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:15:38] ANSI_COLOR="0;31"
[2025-10-13 00:15:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:15:38] HOME_URL="https://www.centos.org/"
[2025-10-13 00:15:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:15:38] 
[2025-10-13 00:15:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:15:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:15:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:15:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:15:38] 
[2025-10-13 00:15:38] 2025-10-12 22:14:53,942 | INFO     | ***************************************
[2025-10-13 00:15:38] 2025-10-12 22:14:54,445 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-10-13 00:15:38] 2025-10-12 22:14:54,466 | INFO     | sufficient remaining disk space (1681169317888 B)
[2025-10-13 00:15:38] 2025-10-12 22:14:54,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:15:38] 2025-10-12 22:14:54,466 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:15:38] 2025-10-12 22:14:54,466 | INFO     | update_server=False
[2025-10-13 00:15:38] 2025-10-12 22:14:54,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:15:38] 2025-10-12 22:14:54,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:15:38] 2025-10-12 22:14:54,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:15:38] 2025-10-12 22:14:54,519 | INFO     | all data control threads have been joined
[2025-10-13 00:15:38] 2025-10-12 22:14:54,554 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 00:15:38] 2025-10-12 22:14:54,555 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 00:15:38] 2025-10-12 22:14:54,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:15:38] 2025-10-12 22:14:54,555 | INFO     | will abort loop
[2025-10-13 00:15:38] 2025-10-12 22:14:55,021 | INFO     | all job control threads have been joined
[2025-10-13 00:15:38] 2025-10-12 22:14:55,054 | INFO     | all payload control threads have been joined
[2025-10-13 00:15:38] 2025-10-12 22:14:55,472 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:55,525 | INFO     | [data] control thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:55,560 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:55,663 | INFO     | [job] validate thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:55,803 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:56,026 | INFO     | [job] control thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:56,058 | INFO     | [payload] control thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:56,086 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:56,168 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:56,473 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:56,495 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:56,889 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:56,899 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:57,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:15:38] 2025-10-12 22:14:58,399 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:14:58,473 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:15:04,891 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:15:38] 2025-10-12 22:15:05,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:15:38] 2025-10-12 22:15:24,092 | INFO     | PID=1979274 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:15:38] 2025-10-12 22:15:24,092 | INFO     | .. there are 8 such processes running
[2025-10-13 00:15:38] 2025-10-12 22:15:24,093 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:15:38] 2025-10-12 22:15:24,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:15:38] 2025-10-12 22:15:24,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:15:38] 2025-10-12 22:15:30,578 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:15:38] 2025-10-12 22:15:32,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343726352192)>', '<ExcThread(monitor, started 140342888232704)>']
[2025-10-13 00:15:38] 2025-10-12 22:15:33,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:15:38] 2025-10-12 22:15:33,139 | INFO     | [monitor] control thread has ended
[2025-10-13 00:15:38] 2025-10-12 22:15:37,637 | INFO     | all workflow threads have been joined
[2025-10-13 00:15:38] 2025-10-12 22:15:37,637 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:15:38] 2025-10-12 22:15:37,638 | INFO     | traces error code: 0
[2025-10-13 00:15:38] 2025-10-12 22:15:37,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:15:38] 2025-10-12 22:15:37,776 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:15:38] 2025-10-12 22:15:37,780 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:15:38] 2025-10-12 22:15:37,783 [wrapper] pilotpid: 1979274
[2025-10-13 00:15:38] 2025-10-12 22:15:37,787 [wrapper] Pilot exit status: 0
[2025-10-13 00:15:38] 2025-10-12 22:15:37,803 [wrapper] pandaids: 6840082419
[2025-10-13 00:15:38] 2025-10-12 22:15:37,895 [wrapper] cleanup supervisor_pilot 2169741 1979275
[2025-10-13 00:15:38] 2025-10-12 22:15:37,899 [wrapper] Test setup, not cleaning
[2025-10-13 00:15:38] 2025-10-12 22:15:37,903 [wrapper] apfmon messages muted
[2025-10-13 00:15:38] 2025-10-12 22:15:37,907 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:15:38] 2025-10-12 22:15:37,911 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:15:38]  *** Error codes and diagnostics ***
[2025-10-13 00:15:38]     "exeErrorCode": 0,
[2025-10-13 00:15:38]     "exeErrorDiag": "",
[2025-10-13 00:15:38]     "pilotErrorCode": 0,
[2025-10-13 00:15:38]     "pilotErrorDiag": "",
[2025-10-13 00:15:38]  *** Listing of results directory ***
[2025-10-13 00:15:38] total 410712
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 00:15:38] -rwx------ 1 boinc boinc     36292 Oct 12 16:00 runpilot2-wrapper.sh
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc      5112 Oct 12 16:00 queuedata.json
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:15:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:19 run_atlas
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:19 job.xml
[2025-10-13 00:15:38] -rw-r--r-- 2 boinc boinc 219782086 Oct 12 23:19 EVNT.46676267._004209.pool.root.1
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc      6665 Oct 12 23:19 init_data.xml
[2025-10-13 00:15:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:19 start_atlas.sh
[2025-10-13 00:15:38] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:19 shared
[2025-10-13 00:15:38] -rw-r--r-- 2 boinc boinc    569679 Oct 12 23:19 input.tar.gz
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:19 boinc_lockfile
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc      2550 Oct 12 23:19 pandaJob.out
[2025-10-13 00:15:38] -rw------- 1 boinc boinc    975528 Oct 12 23:19 agis_schedconf.cvmfs.json
[2025-10-13 00:15:38] -rw------- 1 boinc boinc   1560580 Oct 12 23:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:15:38] drwx------ 5 boinc boinc      4096 Oct 12 23:19 pilot3
[2025-10-13 00:15:38] -rw------- 1 boinc boinc 195155741 Oct 13 00:14 HITS.46676269._080177.pool.root.1
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc       530 Oct 13 00:14 boinc_task_state.xml
[2025-10-13 00:15:38] -rw------- 1 boinc boinc        95 Oct 13 00:14 pilot_heartbeat.json
[2025-10-13 00:15:38] -rw------- 1 boinc boinc      1022 Oct 13 00:14 memory_monitor_summary.json
[2025-10-13 00:15:38] -rw------- 1 boinc boinc    366981 Oct 13 00:14 log.46676269._080177.job.log.tgz.1
[2025-10-13 00:15:38] -rw------- 1 boinc boinc      7780 Oct 13 00:14 heartbeat.json
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:15 wrapper_checkpoint.txt
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:15 boinc_mmap_file
[2025-10-13 00:15:38] -rw------- 1 boinc boinc      5084 Oct 13 00:15 pilotlog.txt
[2025-10-13 00:15:38] -rw------- 1 boinc boinc    498743 Oct 13 00:15 log.46676269._080177.job.log.1
[2025-10-13 00:15:38] -rw------- 1 boinc boinc       357 Oct 13 00:15 output.list
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:15 runtime_log
[2025-10-13 00:15:38] -rw------- 1 boinc boinc    880640 Oct 13 00:15 result.tar.gz
[2025-10-13 00:15:38] -rw------- 1 boinc boinc       663 Oct 13 00:15 snHNDmknBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR9jNDmrytbtm.diag
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc      8764 Oct 13 00:15 runtime_log.err
[2025-10-13 00:15:38] -rw-r--r-- 1 boinc boinc     22432 Oct 13 00:15 stderr.txt
[2025-10-13 00:15:38] HITS file was successfully produced:
[2025-10-13 00:15:38] -rw------- 1 boinc boinc 195155741 Oct 13 00:14 shared/HITS.pool.root.1
[2025-10-13 00:15:38]  *** Contents of shared directory: ***
[2025-10-13 00:15:38] total 406660
[2025-10-13 00:15:38] -rw-r--r-- 2 boinc boinc 219782086 Oct 12 23:19 ATLAS.root_0
[2025-10-13 00:15:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:19 start_atlas.sh
[2025-10-13 00:15:38] -rw-r--r-- 2 boinc boinc    569679 Oct 12 23:19 input.tar.gz
[2025-10-13 00:15:38] -rw------- 1 boinc boinc 195155741 Oct 13 00:14 HITS.pool.root.1
[2025-10-13 00:15:38] -rw------- 1 boinc boinc    880640 Oct 13 00:15 result.tar.gz
00:15:39 (1975219): run_atlas exited; CPU time 34814.668963
00:15:39 (1975219): called boinc_finish(0)

</stderr_txt>
]]>

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