Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:46:54 (1097644): wrapper (7.7.26015): starting
13:46:54 (1097644): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:46:54] Arguments: --nthreads 8
[2025-10-12 13:46:54] Threads: 8
[2025-10-12 13:46:54] Checking for CVMFS
[2025-10-12 13:46:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:46:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:46:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:46:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:46:56] 2.13.2.0 1539006 129561 300056 151629 3 454 22257930 32935936 31841 16776704 1 258003979 99.627 249536258 19494 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 13:46:56] CVMFS is ok
[2025-10-12 13:46:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:46:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:46:56] Further information can be found at the LHC@home message board.
[2025-10-12 13:46:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:46:56] Checking for apptainer binary...
[2025-10-12 13:46:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:46:56] Running /usr/bin/apptainer --version
[2025-10-12 13:46:56] apptainer version 1.4.3-1.el9
[2025-10-12 13:46:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:46:57] c6-12-29-4.aglt2.org
[2025-10-12 13:46:57] apptainer works
[2025-10-12 13:46:57] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:46:57] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:46:57] Starting ATLAS job with PandaID=6840082403
[2025-10-12 13:46:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:01:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:01:59] 2025-10-12 21:01:08,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:01:59] 2025-10-12 21:01:08,528 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:01:59] 2025-10-12 21:01:08,529 | INFO     | sum of square deviations: 1995140479.8978457
[2025-10-12 17:01:59] 2025-10-12 21:01:08,530 | INFO     | sum of deviations: 58338492277.6129
[2025-10-12 17:01:59] 2025-10-12 21:01:08,530 | INFO     | mean x: 1760297134.6182795
[2025-10-12 17:01:59] 2025-10-12 21:01:08,531 | INFO     | mean y: 2121401.290322581
[2025-10-12 17:01:59] 2025-10-12 21:01:08,531 | INFO     | -- intersect: -51469482643.0979
[2025-10-12 17:01:59] 2025-10-12 21:01:08,531 | INFO     | intersect: -51469482643.0979
[2025-10-12 17:01:59] 2025-10-12 21:01:08,531 | INFO     | chi2: 3.3236474165705348
[2025-10-12 17:01:59] 2025-10-12 21:01:08,531 | INFO     | sum of square deviations: 1838520997.3259711
[2025-10-12 17:01:59] 2025-10-12 21:01:08,533 | INFO     | sum of deviations: 57472298493.535866
[2025-10-12 17:01:59] 2025-10-12 21:01:08,533 | INFO     | mean x: 1760296982.121547
[2025-10-12 17:01:59] 2025-10-12 21:01:08,533 | INFO     | mean y: 2120558.6574585633
[2025-10-12 17:01:59] 2025-10-12 21:01:08,533 | INFO     | -- intersect: -55024889598.36753
[2025-10-12 17:01:59] 2025-10-12 21:01:08,533 | INFO     | intersect: -55024889598.36753
[2025-10-12 17:01:59] 2025-10-12 21:01:08,534 | INFO     | chi2: 3.320848396651314
[2025-10-12 17:01:59] 2025-10-12 21:01:08,534 | INFO     | current chi2=3.320848396651314 (change=0.0842153083165804 %)
[2025-10-12 17:01:59] 2025-10-12 21:01:08,534 | INFO     | right removable region: 180
[2025-10-12 17:01:59] 2025-10-12 21:01:08,534 | INFO     | sum of square deviations: 1838507577.3259711
[2025-10-12 17:01:59] 2025-10-12 21:01:08,535 | INFO     | sum of deviations: 15859784620.309387
[2025-10-12 17:01:59] 2025-10-12 21:01:08,536 | INFO     | mean x: 1760297287.121547
[2025-10-12 17:01:59] 2025-10-12 21:01:08,536 | INFO     | mean y: 2162605.8950276244
[2025-10-12 17:01:59] 2025-10-12 21:01:08,536 | INFO     | -- intersect: -15182945242.32394
[2025-10-12 17:01:59] 2025-10-12 21:01:08,536 | INFO     | intersect: -15182945242.32394
[2025-10-12 17:01:59] 2025-10-12 21:01:08,536 | INFO     | chi2: 0.5165059921021425
[2025-10-12 17:01:59] 2025-10-12 21:01:08,536 | INFO     | current chi2=0.5165059921021425 (change=84.45966351523853 %)
[2025-10-12 17:01:59] 2025-10-12 21:01:08,537 | INFO     | sum of square deviations: 1690304233.4943168
[2025-10-12 17:01:59] 2025-10-12 21:01:08,538 | INFO     | sum of deviations: 303922232.4545462
[2025-10-12 17:01:59] 2025-10-12 21:01:08,538 | INFO     | mean x: 1760297439.6193182
[2025-10-12 17:01:59] 2025-10-12 21:01:08,538 | INFO     | mean y: 2178557.4545454546
[2025-10-12 17:01:59] 2025-10-12 21:01:08,538 | INFO     | -- intersect: -314328682.5037598
[2025-10-12 17:01:59] 2025-10-12 21:01:08,538 | INFO     | intersect: -314328682.5037598
[2025-10-12 17:01:59] 2025-10-12 21:01:08,539 | INFO     | chi2: 0.15169515635024786
[2025-10-12 17:01:59] 2025-10-12 21:01:08,539 | INFO     | current chi2=0.15169515635024786 (change=70.63051374624727 %)
[2025-10-12 17:01:59] 2025-10-12 21:01:08,539 | INFO     | sum of square deviations: 1550308804.1052651
[2025-10-12 17:01:59] 2025-10-12 21:01:08,540 | INFO     | sum of deviations: -1522522303.0000007
[2025-10-12 17:01:59] 2025-10-12 21:01:08,541 | INFO     | mean x: 1760297592.1052632
[2025-10-12 17:01:59] 2025-10-12 21:01:08,541 | INFO     | mean y: 2180500.222222222
[2025-10-12 17:01:59] 2025-10-12 21:01:08,541 | INFO     | -- intersect: 1730927919.3173695
[2025-10-12 17:01:59] 2025-10-12 21:01:08,541 | INFO     | intersect: 1730927919.3173695
[2025-10-12 17:01:59] 2025-10-12 21:01:08,541 | INFO     | chi2: 0.12848078931351112
[2025-10-12 17:01:59] 2025-10-12 21:01:08,541 | INFO     | current chi2=0.12848078931351112 (change=15.303301433789523 %)
[2025-10-12 17:01:59] 2025-10-12 21:01:08,541 | INFO     | left removable region: 30
[2025-10-12 17:01:59] 2025-10-12 21:01:08,542 | INFO     | sum of square deviations: 1046414972.5400002
[2025-10-12 17:01:59] 2025-10-12 21:01:08,543 | INFO     | sum of deviations: -2439965595.24
[2025-10-12 17:01:59] 2025-10-12 21:01:08,543 | INFO     | mean x: 1760297866.58
[2025-10-12 17:01:59] 2025-10-12 21:01:08,543 | INFO     | mean y: 2184374.8533333335
[2025-10-12 17:01:59] 2025-10-12 21:01:08,543 | INFO     | -- intersect: 4106737868.964761
[2025-10-12 17:01:59] 2025-10-12 21:01:08,543 | INFO     | intersect: 4106737868.964761
[2025-10-12 17:01:59] 2025-10-12 21:01:08,543 | INFO     | chi2: 0.05626810910361569
[2025-10-12 17:01:59] 2025-10-12 21:01:08,544 | INFO     | -- intersect: 4106737868.964761
[2025-10-12 17:01:59] 2025-10-12 21:01:08,544 | INFO     | current memory leak: -2.33 B/s (using 150 data points, chi2=0.06)
[2025-10-12 17:01:59] 2025-10-12 21:01:08,544 | INFO     | could have reported an average CPU frequency of 2523 MHz (10 samples)
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | ..............................
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | . Timing measurements:
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | . get job = 0 s
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | . initial setup = 11 s
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | . payload setup = 57 s
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | . stage-in = 0 s
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | . payload execution = 11382 s
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | . stage-out = 4 s
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | . log creation = 0 s
[2025-10-12 17:01:59] 2025-10-12 21:01:08,545 | INFO     | ..............................
[2025-10-12 17:01:59] 2025-10-12 21:01:08,647 | INFO     | 
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | job summary report
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | --------------------------------------------------
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | PanDA job id: 6840082403
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | task id: 46676269
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | errors: (none)
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | pilot state: finished 
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | transexitcode: 0
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | exeerrorcode: 0
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | exeerrordiag: 
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | exitcode: 0
[2025-10-12 17:01:59] 2025-10-12 21:01:08,648 | INFO     | exitmsg: OK
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | cpuconsumptiontime: 48007 s
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | nevents: 400
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | neventsw: 0
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | pid: 1115741
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | pgrp: 1115741
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | corecount: 8
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | event service: False
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 35: 2348969, 43: 2349387, 46: 2349415, 11443: 2378537, 11450: 2387535, 11453: 2387591, 11472:
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | --------------------------------------------------
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | 
[2025-10-12 17:01:59] 2025-10-12 21:01:08,649 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:01:59] 2025-10-12 21:01:08,676 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,676 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,676 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,676 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,678 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:01:59] 2025-10-12 21:01:08,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,678 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:01:59] 2025-10-12 21:01:08,678 | INFO     | job 6840082403 has completed (purged errors)
[2025-10-12 17:01:59] 2025-10-12 21:01:08,678 | INFO     | overall cleanup function is called
[2025-10-12 17:01:59] 2025-10-12 21:01:09,687 | INFO     | --- collectZombieJob: --- 10, [1115741]
[2025-10-12 17:01:59] 2025-10-12 21:01:09,688 | INFO     | zombie collector waiting for pid 1115741
[2025-10-12 17:01:59] 2025-10-12 21:01:09,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:01:59] 2025-10-12 21:01:09,688 | INFO     | collected zombie processes
[2025-10-12 17:01:59] 2025-10-12 21:01:09,688 | INFO     | will attempt to kill all subprocesses of pid=1115741
[2025-10-12 17:01:59] 2025-10-12 21:01:10,827 | INFO     | process IDs to be killed: [1115741] (in reverse order)
[2025-10-12 17:01:59] 2025-10-12 21:01:11,337 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:01:59] 2025-10-12 21:01:11,337 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:01:59] 2025-10-12 21:01:11,397 | INFO     | did not find any defunct processes belonging to 1115741
[2025-10-12 17:01:59] 2025-10-12 21:01:11,482 | INFO     | did not find any defunct processes belonging to 1115741
[2025-10-12 17:01:59] 2025-10-12 21:01:11,482 | INFO     | ready for new job
[2025-10-12 17:01:59] 2025-10-12 21:01:11,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:01:59] 2025-10-12 21:01:11,484 | INFO     | ***************************************
[2025-10-12 17:01:59] 2025-10-12 21:01:11,484 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:01:59] 2025-10-12 21:01:11,484 | INFO     | ***************************************
[2025-10-12 17:01:59] 2025-10-12 21:01:11,484 | INFO     | 
[2025-10-12 17:01:59] 2025-10-12 21:01:11,521 | INFO     | architecture information:
[2025-10-12 17:01:59] 2025-10-12 21:01:11,522 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:01:59] 2025-10-12 21:01:11,615 | INFO     | cat /etc/os-release:
[2025-10-12 17:01:59] NAME="CentOS Linux"
[2025-10-12 17:01:59] VERSION="7 (Core)"
[2025-10-12 17:01:59] ID="centos"
[2025-10-12 17:01:59] ID_LIKE="rhel fedora"
[2025-10-12 17:01:59] VERSION_ID="7"
[2025-10-12 17:01:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:01:59] ANSI_COLOR="0;31"
[2025-10-12 17:01:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:01:59] HOME_URL="https://www.centos.org/"
[2025-10-12 17:01:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:01:59] 
[2025-10-12 17:01:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:01:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:01:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:01:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:01:59] 
[2025-10-12 17:01:59] 2025-10-12 21:01:11,615 | INFO     | ***************************************
[2025-10-12 17:01:59] 2025-10-12 21:01:12,119 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:01:59] 2025-10-12 21:01:12,259 | INFO     | sufficient remaining disk space (94745133056 B)
[2025-10-12 17:01:59] 2025-10-12 21:01:12,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:01:59] 2025-10-12 21:01:12,260 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:01:59] 2025-10-12 21:01:12,260 | INFO     | update_server=False
[2025-10-12 17:01:59] 2025-10-12 21:01:12,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:01:59] 2025-10-12 21:01:12,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:01:59] 2025-10-12 21:01:12,479 | INFO     | all payload control threads have been joined
[2025-10-12 17:01:59] 2025-10-12 21:01:12,525 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 17:01:59] 2025-10-12 21:01:12,525 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 17:01:59] 2025-10-12 21:01:12,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:01:59] 2025-10-12 21:01:12,525 | INFO     | will abort loop
[2025-10-12 17:01:59] 2025-10-12 21:01:12,693 | INFO     | all data control threads have been joined
[2025-10-12 17:01:59] 2025-10-12 21:01:13,266 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:13,423 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:13,485 | INFO     | [payload] control thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:13,532 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:13,613 | INFO     | all job control threads have been joined
[2025-10-12 17:01:59] 2025-10-12 21:01:13,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:01:59] 2025-10-12 21:01:13,707 | INFO     | [data] control thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:13,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:01:59] 2025-10-12 21:01:13,958 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:14,267 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:14,342 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:14,377 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:14,377 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:14,384 | INFO     | [job] validate thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:14,426 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:14,619 | INFO     | [job] control thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:14,690 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:14,775 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:17,958 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:01:59] 2025-10-12 21:01:41,166 | INFO     | PID=1102348 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:01:59] 2025-10-12 21:01:41,166 | INFO     | .. there are 33 such processes running
[2025-10-12 17:01:59] 2025-10-12 21:01:41,168 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:01:59] 2025-10-12 21:01:41,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:01:59] 2025-10-12 21:01:41,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:01:59] 2025-10-12 21:01:51,847 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:01:59] 2025-10-12 21:01:53,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139758762235712)>', '<ExcThread(monitor, started 139757807978240)>']
[2025-10-12 17:01:59] 2025-10-12 21:01:53,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:01:59] 2025-10-12 21:01:53,264 | INFO     | [monitor] control thread has ended
[2025-10-12 17:01:59] 2025-10-12 21:01:58,051 | INFO     | all workflow threads have been joined
[2025-10-12 17:01:59] 2025-10-12 21:01:58,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:01:59] 2025-10-12 21:01:58,051 | INFO     | traces error code: 0
[2025-10-12 17:01:59] 2025-10-12 21:01:58,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:01:59] 2025-10-12 21:01:58,715 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:01:59] 2025-10-12 21:01:58,720 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:01:59] 2025-10-12 21:01:58,724 [wrapper] pilotpid: 1102348
[2025-10-12 17:01:59] 2025-10-12 21:01:58,727 [wrapper] Pilot exit status: 0
[2025-10-12 17:01:59] 2025-10-12 21:01:58,771 [wrapper] pandaids: 6840082403
[2025-10-12 17:01:59] 2025-10-12 21:01:58,871 [wrapper] cleanup supervisor_pilot 1639791 1102349
[2025-10-12 17:01:59] 2025-10-12 21:01:58,876 [wrapper] Test setup, not cleaning
[2025-10-12 17:01:59] 2025-10-12 21:01:58,880 [wrapper] apfmon messages muted
[2025-10-12 17:01:59] 2025-10-12 21:01:58,884 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:01:59] 2025-10-12 21:01:58,887 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:01:59]  *** Error codes and diagnostics ***
[2025-10-12 17:01:59]     "exeErrorCode": 0,
[2025-10-12 17:01:59]     "exeErrorDiag": "",
[2025-10-12 17:01:59]     "pilotErrorCode": 0,
[2025-10-12 17:01:59]     "pilotErrorDiag": "",
[2025-10-12 17:01:59]  *** Listing of results directory ***
[2025-10-12 17:01:59] total 415772
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 17:01:59] -rwx------. 1 boincer umatlas     36292 Oct 12 10:00 runpilot2-wrapper.sh
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 10:00 queuedata.json
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:01:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:46 run_atlas
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:46 job.xml
[2025-10-12 17:01:59] -rw-r--r--. 2 boincer umatlas 219018651 Oct 12 13:46 EVNT.46676267._004208.pool.root.1
[2025-10-12 17:01:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:46 shared
[2025-10-12 17:01:59] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 13:46 input.tar.gz
[2025-10-12 17:01:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:46 start_atlas.sh
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:46 boinc_lockfile
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 13:46 pandaJob.out
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas    975528 Oct 12 13:48 agis_schedconf.cvmfs.json
[2025-10-12 17:01:59] drwx------. 5 boincer umatlas      4096 Oct 12 13:48 pilot3
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas 199098703 Oct 12 16:59 HITS.46676269._080161.pool.root.1
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas       531 Oct 12 17:00 boinc_task_state.xml
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas      1057 Oct 12 17:00 memory_monitor_summary.json
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas   1560580 Oct 12 17:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas      6861 Oct 12 17:00 init_data.xml
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas    429353 Oct 12 17:00 log.46676269._080161.job.log.tgz.1
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas      7840 Oct 12 17:01 heartbeat.json
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas        95 Oct 12 17:01 pilot_heartbeat.json
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas      5010 Oct 12 17:01 pilotlog.txt
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas   1437041 Oct 12 17:01 log.46676269._080161.job.log.1
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:01 boinc_mmap_file
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas       357 Oct 12 17:01 output.list
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas        28 Oct 12 17:01 wrapper_checkpoint.txt
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:01 runtime_log
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas   1884160 Oct 12 17:01 result.tar.gz
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas       658 Oct 12 17:01 YF3MDmknBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ9jNDmQ3MW7m.diag
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 17:01 runtime_log.err
[2025-10-12 17:01:59] -rw-r--r--. 1 boincer umatlas     21060 Oct 12 17:01 stderr.txt
[2025-10-12 17:01:59] HITS file was successfully produced:
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas 199098703 Oct 12 16:59 shared/HITS.pool.root.1
[2025-10-12 17:01:59]  *** Contents of shared directory: ***
[2025-10-12 17:01:59] total 410744
[2025-10-12 17:01:59] -rw-r--r--. 2 boincer umatlas 219018651 Oct 12 13:46 ATLAS.root_0
[2025-10-12 17:01:59] -rw-r--r--. 2 boincer umatlas    569680 Oct 12 13:46 input.tar.gz
[2025-10-12 17:01:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:46 start_atlas.sh
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas 199098703 Oct 12 16:59 HITS.pool.root.1
[2025-10-12 17:01:59] -rw-------. 1 boincer umatlas   1884160 Oct 12 17:01 result.tar.gz
17:02:01 (1097644): run_atlas exited; CPU time 48589.704105
17:02:01 (1097644): called boinc_finish(0)

</stderr_txt>
]]>

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