Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:17:01 (13126): wrapper (7.7.26015): starting
13:17:01 (13126): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:17:01] Arguments: --nthreads 8
[2025-10-12 13:17:01] Threads: 8
[2025-10-12 13:17:01] Checking for CVMFS
[2025-10-12 13:17:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:17:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:17:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:17:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:17:02] 2.11.2.0 2924 203145 120184 151629 2 56 16277177 20275200 1 130560 1 74583196 99.975 10544521 11291 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:17:02] CVMFS is ok
[2025-10-12 13:17:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:17:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:17:02] Further information can be found at the LHC@home message board.
[2025-10-12 13:17:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:17:02] Checking for apptainer binary...
[2025-10-12 13:17:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:17:02] Running /usr/bin/apptainer --version
[2025-10-12 13:17:02] apptainer version 1.3.2-1.el7
[2025-10-12 13:17:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:17:04] c-204-30.aglt2.org
[2025-10-12 13:17:04] apptainer works
[2025-10-12 13:17:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:17:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:17:04] Starting ATLAS job with PandaID=6840082388
[2025-10-12 13:17:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:23:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:23:39] 2025-10-12 19:22:54,832 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:23:39] 2025-10-12 19:22:54,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:23:39] 2025-10-12 19:22:54,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:23:39] 2025-10-12 19:22:54,833 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:23:39] 2025-10-12 19:22:54,837 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:23:39] 2025-10-12 19:22:54,837 | INFO     | sum of square deviations: 576985702.0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,838 | INFO     | sum of deviations: 5690522005.999998
[2025-10-12 15:23:39] 2025-10-12 19:22:54,838 | INFO     | mean x: 1760293194.0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,838 | INFO     | mean y: 2512635.1951219514
[2025-10-12 15:23:39] 2025-10-12 19:22:54,838 | INFO     | -- intersect: -17358380577.144867
[2025-10-12 15:23:39] 2025-10-12 19:22:54,838 | INFO     | intersect: -17358380577.144867
[2025-10-12 15:23:39] 2025-10-12 19:22:54,839 | INFO     | chi2: 1.7056062387515423
[2025-10-12 15:23:39] 2025-10-12 19:22:54,839 | INFO     | sum of square deviations: 509440249.5
[2025-10-12 15:23:39] 2025-10-12 19:22:54,840 | INFO     | sum of deviations: 5714082645.999998
[2025-10-12 15:23:39] 2025-10-12 19:22:54,840 | INFO     | mean x: 1760293041.5
[2025-10-12 15:23:39] 2025-10-12 19:22:54,840 | INFO     | mean y: 2512688.4237288134
[2025-10-12 15:23:39] 2025-10-12 19:22:54,840 | INFO     | -- intersect: -19741627925.08644
[2025-10-12 15:23:39] 2025-10-12 19:22:54,840 | INFO     | intersect: -19741627925.08644
[2025-10-12 15:23:39] 2025-10-12 19:22:54,840 | INFO     | chi2: 1.7082260404927432
[2025-10-12 15:23:39] 2025-10-12 19:22:54,841 | INFO     | current chi2=1.7082260404927432 (change=-0.15359944644190182 %)
[2025-10-12 15:23:39] 2025-10-12 19:22:54,841 | INFO     | right removable region: 117
[2025-10-12 15:23:39] 2025-10-12 19:22:54,841 | INFO     | sum of square deviations: 509440249.5
[2025-10-12 15:23:39] 2025-10-12 19:22:54,841 | INFO     | sum of deviations: -13723267142.499998
[2025-10-12 15:23:39] 2025-10-12 19:22:54,842 | INFO     | mean x: 1760293346.5
[2025-10-12 15:23:39] 2025-10-12 19:22:54,842 | INFO     | mean y: 2555707.618644068
[2025-10-12 15:23:39] 2025-10-12 19:22:54,842 | INFO     | -- intersect: 47421219362.27519
[2025-10-12 15:23:39] 2025-10-12 19:22:54,842 | INFO     | intersect: 47421219362.27519
[2025-10-12 15:23:39] 2025-10-12 19:22:54,842 | INFO     | chi2: 0.15644724749085873
[2025-10-12 15:23:39] 2025-10-12 19:22:54,842 | INFO     | current chi2=0.15644724749085873 (change=90.82746979130577 %)
[2025-10-12 15:23:39] 2025-10-12 19:22:54,843 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,843 | INFO     | sum of deviations: -16136418450.0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,843 | INFO     | mean x: 1760293499.0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,843 | INFO     | mean y: 2561638.0619469024
[2025-10-12 15:23:39] 2025-10-12 19:22:54,844 | INFO     | -- intersect: 63493608962.421135
[2025-10-12 15:23:39] 2025-10-12 19:22:54,844 | INFO     | intersect: 63493608962.421135
[2025-10-12 15:23:39] 2025-10-12 19:22:54,844 | INFO     | chi2: 0.11188363820924299
[2025-10-12 15:23:39] 2025-10-12 19:22:54,844 | INFO     | current chi2=0.11188363820924299 (change=28.484751247681494 %)
[2025-10-12 15:23:39] 2025-10-12 19:22:54,844 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,845 | INFO     | sum of deviations: -13331597915.5
[2025-10-12 15:23:39] 2025-10-12 19:22:54,845 | INFO     | mean x: 1760293651.5
[2025-10-12 15:23:39] 2025-10-12 19:22:54,845 | INFO     | mean y: 2554080.7685185187
[2025-10-12 15:23:39] 2025-10-12 19:22:54,845 | INFO     | -- intersect: 60086005795.7241
[2025-10-12 15:23:39] 2025-10-12 19:22:54,845 | INFO     | intersect: 60086005795.7241
[2025-10-12 15:23:39] 2025-10-12 19:22:54,846 | INFO     | chi2: 0.10997181498303062
[2025-10-12 15:23:39] 2025-10-12 19:22:54,846 | INFO     | current chi2=0.10997181498303062 (change=1.7087603306543482 %)
[2025-10-12 15:23:39] 2025-10-12 19:22:54,846 | INFO     | left removable region: 30
[2025-10-12 15:23:39] 2025-10-12 19:22:54,846 | INFO     | sum of square deviations: 204163828.0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,846 | INFO     | sum of deviations: -2087323010.0000002
[2025-10-12 15:23:39] 2025-10-12 19:22:54,847 | INFO     | mean x: 1760293926.0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,847 | INFO     | mean y: 2518037.827586207
[2025-10-12 15:23:39] 2025-10-12 19:22:54,847 | INFO     | -- intersect: 17999349563.25842
[2025-10-12 15:23:39] 2025-10-12 19:22:54,847 | INFO     | intersect: 17999349563.25842
[2025-10-12 15:23:39] 2025-10-12 19:22:54,847 | INFO     | chi2: 0.04478808074863996
[2025-10-12 15:23:39] 2025-10-12 19:22:54,847 | INFO     | -- intersect: 17999349563.25842
[2025-10-12 15:23:39] 2025-10-12 19:22:54,848 | INFO     | current memory leak: -10.22 B/s (using 87 data points, chi2=0.04)
[2025-10-12 15:23:39] 2025-10-12 19:22:54,848 | INFO     | could have reported an average CPU frequency of 2005 MHz (8 samples)
[2025-10-12 15:23:39] 2025-10-12 19:22:54,848 | INFO     | ..............................
[2025-10-12 15:23:39] 2025-10-12 19:22:54,848 | INFO     | . Timing measurements:
[2025-10-12 15:23:39] 2025-10-12 19:22:54,848 | INFO     | . get job = 0 s
[2025-10-12 15:23:39] 2025-10-12 19:22:54,849 | INFO     | . initial setup = 2 s
[2025-10-12 15:23:39] 2025-10-12 19:22:54,849 | INFO     | . payload setup = 8 s
[2025-10-12 15:23:39] 2025-10-12 19:22:54,849 | INFO     | . stage-in = 0 s
[2025-10-12 15:23:39] 2025-10-12 19:22:54,849 | INFO     | . payload execution = 7495 s
[2025-10-12 15:23:39] 2025-10-12 19:22:54,849 | INFO     | . stage-out = 0 s
[2025-10-12 15:23:39] 2025-10-12 19:22:54,849 | INFO     | . log creation = 0 s
[2025-10-12 15:23:39] 2025-10-12 19:22:54,849 | INFO     | ..............................
[2025-10-12 15:23:39] 2025-10-12 19:22:54,961 | INFO     | 
[2025-10-12 15:23:39] 2025-10-12 19:22:54,961 | INFO     | job summary report
[2025-10-12 15:23:39] 2025-10-12 19:22:54,961 | INFO     | --------------------------------------------------
[2025-10-12 15:23:39] 2025-10-12 19:22:54,961 | INFO     | PanDA job id: 6840082388
[2025-10-12 15:23:39] 2025-10-12 19:22:54,961 | INFO     | task id: 46676269
[2025-10-12 15:23:39] 2025-10-12 19:22:54,962 | INFO     | errors: (none)
[2025-10-12 15:23:39] 2025-10-12 19:22:54,962 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:23:39] 2025-10-12 19:22:54,962 | INFO     | pilot state: finished 
[2025-10-12 15:23:39] 2025-10-12 19:22:54,962 | INFO     | transexitcode: 0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,962 | INFO     | exeerrorcode: 0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,963 | INFO     | exeerrordiag: 
[2025-10-12 15:23:39] 2025-10-12 19:22:54,963 | INFO     | exitcode: 0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,963 | INFO     | exitmsg: OK
[2025-10-12 15:23:39] 2025-10-12 19:22:54,963 | INFO     | cpuconsumptiontime: 54287 s
[2025-10-12 15:23:39] 2025-10-12 19:22:54,963 | INFO     | nevents: 400
[2025-10-12 15:23:39] 2025-10-12 19:22:54,963 | INFO     | neventsw: 0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,964 | INFO     | pid: 23255
[2025-10-12 15:23:39] 2025-10-12 19:22:54,964 | INFO     | pgrp: 23255
[2025-10-12 15:23:39] 2025-10-12 19:22:54,964 | INFO     | corecount: 8
[2025-10-12 15:23:39] 2025-10-12 19:22:54,964 | INFO     | event service: False
[2025-10-12 15:23:39] 2025-10-12 19:22:54,964 | INFO     | sizes: {0: 2348857, 1: 2348857, 6: 2349147, 11: 2349175, 7507: 2376721, 7508: 2385719, 7509: 2385903, 7516: 2386097}
[2025-10-12 15:23:39] 2025-10-12 19:22:54,964 | INFO     | --------------------------------------------------
[2025-10-12 15:23:39] 2025-10-12 19:22:54,965 | INFO     | 
[2025-10-12 15:23:39] 2025-10-12 19:22:54,965 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:23:39] 2025-10-12 19:22:54,994 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,994 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,994 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,995 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,995 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,995 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,995 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,995 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,995 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:23:39] 2025-10-12 19:22:54,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,997 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:23:39] 2025-10-12 19:22:54,997 | INFO     | job 6840082388 has completed (purged errors)
[2025-10-12 15:23:39] 2025-10-12 19:22:54,998 | INFO     | overall cleanup function is called
[2025-10-12 15:23:39] 2025-10-12 19:22:56,001 | INFO     | --- collectZombieJob: --- 10, [23255]
[2025-10-12 15:23:39] 2025-10-12 19:22:56,002 | INFO     | zombie collector waiting for pid 23255
[2025-10-12 15:23:39] 2025-10-12 19:22:56,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:23:39] 2025-10-12 19:22:56,002 | INFO     | collected zombie processes
[2025-10-12 15:23:39] 2025-10-12 19:22:56,002 | INFO     | will attempt to kill all subprocesses of pid=23255
[2025-10-12 15:23:39] 2025-10-12 19:22:56,090 | INFO     | process IDs to be killed: [23255] (in reverse order)
[2025-10-12 15:23:39] 2025-10-12 19:22:56,144 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:23:39] 2025-10-12 19:22:56,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:23:39] 2025-10-12 19:22:56,147 | INFO     | did not find any defunct processes belonging to 23255
[2025-10-12 15:23:39] 2025-10-12 19:22:56,150 | INFO     | did not find any defunct processes belonging to 23255
[2025-10-12 15:23:39] 2025-10-12 19:22:56,150 | INFO     | ready for new job
[2025-10-12 15:23:39] 2025-10-12 19:22:56,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:23:39] 2025-10-12 19:22:56,152 | INFO     | ***************************************
[2025-10-12 15:23:39] 2025-10-12 19:22:56,152 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:23:39] 2025-10-12 19:22:56,153 | INFO     | ***************************************
[2025-10-12 15:23:39] 2025-10-12 19:22:56,153 | INFO     | 
[2025-10-12 15:23:39] 2025-10-12 19:22:56,153 | INFO     | architecture information:
[2025-10-12 15:23:39] 2025-10-12 19:22:56,154 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:23:39] 2025-10-12 19:22:56,171 | INFO     | cat /etc/os-release:
[2025-10-12 15:23:39] NAME="CentOS Linux"
[2025-10-12 15:23:39] VERSION="7 (Core)"
[2025-10-12 15:23:39] ID="centos"
[2025-10-12 15:23:39] ID_LIKE="rhel fedora"
[2025-10-12 15:23:39] VERSION_ID="7"
[2025-10-12 15:23:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:23:39] ANSI_COLOR="0;31"
[2025-10-12 15:23:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:23:39] HOME_URL="https://www.centos.org/"
[2025-10-12 15:23:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:23:39] 
[2025-10-12 15:23:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:23:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:23:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:23:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:23:39] 
[2025-10-12 15:23:39] 2025-10-12 19:22:56,172 | INFO     | ***************************************
[2025-10-12 15:23:39] 2025-10-12 19:22:56,676 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:23:39] 2025-10-12 19:22:56,707 | INFO     | sufficient remaining disk space (18563989504 B)
[2025-10-12 15:23:39] 2025-10-12 19:22:56,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:23:39] 2025-10-12 19:22:56,708 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:23:39] 2025-10-12 19:22:56,708 | INFO     | update_server=False
[2025-10-12 15:23:39] 2025-10-12 19:22:56,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:23:39] 2025-10-12 19:22:56,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:23:39] 2025-10-12 19:22:57,171 | INFO     | all data control threads have been joined
[2025-10-12 15:23:39] 2025-10-12 19:22:57,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:23:39] 2025-10-12 19:22:57,427 | INFO     | aborting loop
[2025-10-12 15:23:39] 2025-10-12 19:22:57,711 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:57,714 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:57,724 | INFO     | all payload control threads have been joined
[2025-10-12 15:23:39] 2025-10-12 19:22:57,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:23:39] 2025-10-12 19:22:57,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:23:39] 2025-10-12 19:22:57,969 | INFO     | all job control threads have been joined
[2025-10-12 15:23:39] 2025-10-12 19:22:58,104 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:58,177 | INFO     | [data] control thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:58,247 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:58,256 | INFO     | [job] validate thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:58,432 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:58,510 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:58,704 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:58,730 | INFO     | [payload] control thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:58,820 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:58,975 | INFO     | [job] control thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:59,141 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:59,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:22:59,880 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:23:01,953 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:23:39] 2025-10-12 19:23:26,625 | INFO     | PID=16805 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 15:23:39] 2025-10-12 19:23:26,626 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:23:39] 2025-10-12 19:23:26,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:23:39] 2025-10-12 19:23:26,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:23:39] 2025-10-12 19:23:33,060 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:23:39] 2025-10-12 19:23:34,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369662162752)>', '<ExcThread(monitor, started 140368750290688)>']
[2025-10-12 15:23:39] 2025-10-12 19:23:34,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:23:39] 2025-10-12 19:23:34,663 | INFO     | [monitor] control thread has ended
[2025-10-12 15:23:39] 2025-10-12 19:23:39,415 | INFO     | all workflow threads have been joined
[2025-10-12 15:23:39] 2025-10-12 19:23:39,416 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:23:39] 2025-10-12 19:23:39,418 | INFO     | traces error code: 0
[2025-10-12 15:23:39] 2025-10-12 19:23:39,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:23:39] 2025-10-12 19:23:39,546 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:23:39] 2025-10-12 19:23:39,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:23:39] 2025-10-12 19:23:39,557 [wrapper] pilotpid: 16805
[2025-10-12 15:23:39] 2025-10-12 19:23:39,562 [wrapper] Pilot exit status: 0
[2025-10-12 15:23:39] 2025-10-12 19:23:39,582 [wrapper] pandaids: 6840082388
[2025-10-12 15:23:39] 2025-10-12 19:23:39,634 [wrapper] cleanup supervisor_pilot 18779 16806
[2025-10-12 15:23:39] 2025-10-12 19:23:39,639 [wrapper] Test setup, not cleaning
[2025-10-12 15:23:39] 2025-10-12 19:23:39,644 [wrapper] apfmon messages muted
[2025-10-12 15:23:39] 2025-10-12 19:23:39,648 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:23:39] 2025-10-12 19:23:39,652 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:23:39]  *** Error codes and diagnostics ***
[2025-10-12 15:23:39]     "exeErrorCode": 0,
[2025-10-12 15:23:39]     "exeErrorDiag": "",
[2025-10-12 15:23:39]     "pilotErrorCode": 0,
[2025-10-12 15:23:39]     "pilotErrorDiag": "",
[2025-10-12 15:23:39]  *** Listing of results directory ***
[2025-10-12 15:23:39] total 400896
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:58 queuedata.json
[2025-10-12 15:23:39] -rwx------ 1 boincer umatlas     36292 Oct 12 09:59 runpilot2-wrapper.sh
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:23:39] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:17 run_atlas
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:17 job.xml
[2025-10-12 15:23:39] -rw-r--r-- 2 boincer umatlas 219018651 Oct 12 13:17 EVNT.46676267._004208.pool.root.1
[2025-10-12 15:23:39] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 13:17 input.tar.gz
[2025-10-12 15:23:39] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:17 start_atlas.sh
[2025-10-12 15:23:39] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:17 shared
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:17 boinc_lockfile
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:17 pandaJob.out
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas    975528 Oct 12 13:17 agis_schedconf.cvmfs.json
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas   1560580 Oct 12 13:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:23:39] drwx------ 5 boincer umatlas      4096 Oct 12 13:17 pilot3
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 15:21 init_data.xml
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas 184746849 Oct 12 15:22 HITS.46676269._080146.pool.root.1
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas       529 Oct 12 15:22 boinc_task_state.xml
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas      1051 Oct 12 15:22 memory_monitor_summary.json
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas    362837 Oct 12 15:22 log.46676269._080146.job.log.tgz.1
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas      7851 Oct 12 15:22 heartbeat.json
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas        27 Oct 12 15:23 wrapper_checkpoint.txt
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 15:23 boinc_mmap_file
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas        95 Oct 12 15:23 pilot_heartbeat.json
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas      4746 Oct 12 15:23 pilotlog.txt
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas   1063938 Oct 12 15:23 log.46676269._080146.job.log.1
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas       357 Oct 12 15:23 output.list
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas       620 Oct 12 15:23 runtime_log
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas   1443840 Oct 12 15:23 result.tar.gz
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 15:23 runtime_log.err
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas       659 Oct 12 15:23 BeHLDmmmBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm98jNDmD7FtGo.diag
[2025-10-12 15:23:39] -rw-r--r-- 1 boincer umatlas     20881 Oct 12 15:23 stderr.txt
[2025-10-12 15:23:39] HITS file was successfully produced:
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas 184746849 Oct 12 15:22 shared/HITS.pool.root.1
[2025-10-12 15:23:39]  *** Contents of shared directory: ***
[2025-10-12 15:23:39] total 396296
[2025-10-12 15:23:39] -rw-r--r-- 2 boincer umatlas 219018651 Oct 12 13:17 ATLAS.root_0
[2025-10-12 15:23:39] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 13:17 input.tar.gz
[2025-10-12 15:23:39] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:17 start_atlas.sh
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas 184746849 Oct 12 15:22 HITS.pool.root.1
[2025-10-12 15:23:39] -rw------- 1 boincer umatlas   1443840 Oct 12 15:23 result.tar.gz
15:23:40 (13126): run_atlas exited; CPU time 54222.471591
15:23:40 (13126): called boinc_finish(0)

</stderr_txt>
]]>

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