Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:07:26 (511319): wrapper (7.7.26015): starting
06:07:26 (511319): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 06:07:26] Arguments: --nthreads 4
[2025-10-13 06:07:26] Threads: 4
[2025-10-13 06:07:26] Checking for CVMFS
[2025-10-13 06:07:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:07:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:07:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:07:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:07:26] 2.9.2.0 4261 1429 85992 151647 3 57 33049371 36864000 0 130560 0 1309280 99.993 50578 579 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 06:07:26] CVMFS is ok
[2025-10-13 06:07:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:07:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:07:26] Further information can be found at the LHC@home message board.
[2025-10-13 06:07:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:07:26] Checking for apptainer binary...
[2025-10-13 06:07:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:07:26] Running /usr/bin/apptainer --version
[2025-10-13 06:07:26] apptainer version 1.4.1-1.1
[2025-10-13 06:07:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:07:26] atlasA237
[2025-10-13 06:07:26] apptainer works
[2025-10-13 06:07:26] Set ATHENA_PROC_NUMBER=4
[2025-10-13 06:07:26] Set ATHENA_CORE_NUMBER=4
[2025-10-13 06:07:26] Starting ATLAS job with PandaID=6840082208
[2025-10-13 06:07:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:16:44]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:16:44] 2025-10-13 05:16:27,064 | INFO     | ***************************************
[2025-10-13 07:16:44] 2025-10-13 05:16:27,064 | INFO     | 
[2025-10-13 07:16:44] 2025-10-13 05:16:27,064 | INFO     | architecture information:
[2025-10-13 07:16:44] 2025-10-13 05:16:27,064 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:16:44] 2025-10-13 05:16:27,077 | INFO     | cat /etc/os-release:
[2025-10-13 07:16:44] NAME="CentOS Linux"
[2025-10-13 07:16:44] VERSION="7 (Core)"
[2025-10-13 07:16:44] ID="centos"
[2025-10-13 07:16:44] ID_LIKE="rhel fedora"
[2025-10-13 07:16:44] VERSION_ID="7"
[2025-10-13 07:16:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:16:44] ANSI_COLOR="0;31"
[2025-10-13 07:16:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:16:44] HOME_URL="https://www.centos.org/"
[2025-10-13 07:16:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:16:44] 
[2025-10-13 07:16:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:16:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:16:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:16:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:16:44] 
[2025-10-13 07:16:44] 2025-10-13 05:16:27,077 | INFO     | ***************************************
[2025-10-13 07:16:44] 2025-10-13 05:16:27,580 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 07:16:44] 2025-10-13 05:16:27,595 | INFO     | sufficient remaining disk space (326246596608 B)
[2025-10-13 07:16:44] 2025-10-13 05:16:27,595 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:16:44] 2025-10-13 05:16:27,595 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:16:44] 2025-10-13 05:16:27,595 | INFO     | update_server=False
[2025-10-13 07:16:44] 2025-10-13 05:16:27,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:16:44] 2025-10-13 05:16:27,595 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:16:44] 2025-10-13 05:16:27,595 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 07:16:44] 2025-10-13 05:16:27,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:16:44] 2025-10-13 05:16:27,596 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:16:44] 2025-10-13 05:16:27,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:16:44] 2025-10-13 05:16:27,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:16:44] 2025-10-13 05:16:27,696 | INFO     | all job control threads have been joined
[2025-10-13 07:16:44] 2025-10-13 05:16:27,793 | INFO     | all data control threads have been joined
[2025-10-13 07:16:44] 2025-10-13 05:16:27,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:16:44] 2025-10-13 05:16:27,977 | INFO     | aborting loop
[2025-10-13 07:16:44] 2025-10-13 05:16:28,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:16:44] 2025-10-13 05:16:28,601 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:28,601 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:28,687 | INFO     | all payload control threads have been joined
[2025-10-13 07:16:44] 2025-10-13 05:16:28,702 | INFO     | [job] control thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:28,799 | INFO     | [data] control thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:28,983 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:29,360 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:29,692 | INFO     | [payload] control thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:29,725 | INFO     | [job] validate thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:29,726 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:29,739 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:29,782 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:29,966 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:30,039 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:30,056 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:30,280 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:31,602 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:16:44] 2025-10-13 05:16:38,839 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:16:44] 2025-10-13 05:16:39,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140627492013888)>', '<ExcThread(monitor, started 140626549008128)>']
[2025-10-13 07:16:44] 2025-10-13 05:16:39,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:16:44] 2025-10-13 05:16:39,658 | INFO     | [monitor] control thread has ended
[2025-10-13 07:16:44] 2025-10-13 05:16:44,494 | INFO     | all workflow threads have been joined
[2025-10-13 07:16:44] 2025-10-13 05:16:44,494 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:16:44] 2025-10-13 05:16:44,495 | INFO     | traces error code: 0
[2025-10-13 07:16:44] 2025-10-13 05:16:44,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:16:44] 2025-10-13 05:16:44,564 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:16:44] 2025-10-13 05:16:44,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:16:44] 2025-10-13 05:16:44,571 [wrapper] pilotpid: 515109
[2025-10-13 07:16:44] 2025-10-13 05:16:44,575 [wrapper] Pilot exit status: 0
[2025-10-13 07:16:44] 2025-10-13 05:16:44,586 [wrapper] pandaids: 6840082208
[2025-10-13 07:16:44] 2025-10-13 05:16:44,606 [wrapper] cleanup supervisor_pilot  531354 515110
[2025-10-13 07:16:44] 2025-10-13 05:16:44,610 [wrapper] Test setup, not cleaning
[2025-10-13 07:16:44] 2025-10-13 05:16:44,613 [wrapper] apfmon messages muted
[2025-10-13 07:16:44] 2025-10-13 05:16:44,617 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:16:44] 2025-10-13 05:16:44,621 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:16:44]  *** Error codes and diagnostics ***
[2025-10-13 07:16:44]     "exeErrorCode": 0,
[2025-10-13 07:16:44]     "exeErrorDiag": "",
[2025-10-13 07:16:44]     "pilotErrorCode": 0,
[2025-10-13 07:16:44]     "pilotErrorDiag": "",
[2025-10-13 07:16:44]  *** Listing of results directory ***
[2025-10-13 07:16:44] total 401392
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:53 queuedata.json
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:55 pilot3.tar.gz
[2025-10-13 07:16:44] -rwx------ 1 boinc boinc     36292 Oct 12 15:55 runpilot2-wrapper.sh
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:16:44] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:07 run_atlas
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:07 job.xml
[2025-10-13 07:16:44] -rw-r--r-- 2 boinc boinc 219331324 Oct 13 06:07 EVNT.46676267._004043.pool.root.1
[2025-10-13 07:16:44] -rw-r--r-- 2 boinc boinc    569682 Oct 13 06:07 input.tar.gz
[2025-10-13 07:16:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:07 start_atlas.sh
[2025-10-13 07:16:44] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:07 shared
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:07 boinc_setup_complete
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc      6370 Oct 13 06:07 init_data.xml
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:07 boinc_lockfile
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:07 pandaJob.out
[2025-10-13 07:16:44] -rw------- 1 boinc boinc    974373 Oct 13 06:07 agis_schedconf.cvmfs.json
[2025-10-13 07:16:44] -rw------- 1 boinc boinc   1560580 Oct 13 06:07 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:16:44] drwx------ 5 boinc boinc      4096 Oct 13 06:07 pilot3
[2025-10-13 07:16:44] -rw------- 1 boinc boinc        95 Oct 13 07:15 pilot_heartbeat.json
[2025-10-13 07:16:44] -rw------- 1 boinc boinc 186060458 Oct 13 07:16 HITS.46676269._080023.pool.root.1
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc       530 Oct 13 07:16 boinc_task_state.xml
[2025-10-13 07:16:44] -rw------- 1 boinc boinc      1020 Oct 13 07:16 memory_monitor_summary.json
[2025-10-13 07:16:44] -rw------- 1 boinc boinc    254035 Oct 13 07:16 log.46676269._080023.job.log.tgz.1
[2025-10-13 07:16:44] -rw------- 1 boinc boinc      7763 Oct 13 07:16 heartbeat.json
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:16 boinc_mmap_file
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:16 wrapper_checkpoint.txt
[2025-10-13 07:16:44] -rw------- 1 boinc boinc      4556 Oct 13 07:16 pilotlog.txt
[2025-10-13 07:16:44] -rw------- 1 boinc boinc    615131 Oct 13 07:16 log.46676269._080023.job.log.1
[2025-10-13 07:16:44] -rw------- 1 boinc boinc       357 Oct 13 07:16 output.list
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:16 runtime_log
[2025-10-13 07:16:44] -rw------- 1 boinc boinc    890880 Oct 13 07:16 result.tar.gz
[2025-10-13 07:16:44] -rw------- 1 boinc boinc       661 Oct 13 07:16 vAgKDmRjBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmL8jNDmSbXPpn.diag
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc      8792 Oct 13 07:16 runtime_log.err
[2025-10-13 07:16:44] -rw-r--r-- 1 boinc boinc      9045 Oct 13 07:16 stderr.txt
[2025-10-13 07:16:44] HITS file was successfully produced:
[2025-10-13 07:16:44] -rw------- 1 boinc boinc 186060458 Oct 13 07:16 shared/HITS.pool.root.1
[2025-10-13 07:16:44]  *** Contents of shared directory: ***
[2025-10-13 07:16:44] total 397348
[2025-10-13 07:16:44] -rw-r--r-- 2 boinc boinc 219331324 Oct 13 06:07 ATLAS.root_0
[2025-10-13 07:16:44] -rw-r--r-- 2 boinc boinc    569682 Oct 13 06:07 input.tar.gz
[2025-10-13 07:16:44] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:07 start_atlas.sh
[2025-10-13 07:16:44] -rw------- 1 boinc boinc 186060458 Oct 13 07:16 HITS.pool.root.1
[2025-10-13 07:16:44] -rw------- 1 boinc boinc    890880 Oct 13 07:16 result.tar.gz
07:16:46 (511319): run_atlas exited; CPU time 15477.355419
07:16:46 (511319): called boinc_finish(0)

</stderr_txt>
]]>

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