Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 02:08:45 (17996): vboxwrapper version 26210
2025-10-13 02:08:45 (17996): BOINC client version: 8.2.4
2025-10-13 02:08:45 (17996): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-10-13 02:08:46 (17996): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 02:08:46 (17996): Create VM. (boinc_46fdc9c3baf424db, slot#5)
2025-10-13 02:08:46 (17996): Setting Memory Size for VM. (4000MB)
2025-10-13 02:08:47 (17996): Setting CPU Count for VM. (4)
2025-10-13 02:08:47 (17996): Setting Chipset Options for VM.
2025-10-13 02:08:47 (17996): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 02:08:47 (17996): Setting Boot Options for VM.
2025-10-13 02:08:48 (17996): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 02:08:48 (17996): Enabling VM Network Access.
2025-10-13 02:08:48 (17996): Disabling USB Support for VM.
2025-10-13 02:08:49 (17996): Disabling COM Port Support for VM.
2025-10-13 02:08:49 (17996): Disabling LPT Port Support for VM.
2025-10-13 02:08:49 (17996): Disabling Audio Support for VM.
2025-10-13 02:08:49 (17996): Disabling Clipboard Support for VM.
2025-10-13 02:08:50 (17996): Disabling Drag and Drop Support for VM.
2025-10-13 02:08:50 (17996): Adding storage controller(s) to VM.
2025-10-13 02:08:50 (17996): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 02:08:51 (17996): Adding VirtualBox Guest Additions to VM.
2025-10-13 02:08:51 (17996): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 02:08:51 (17996): forwarding host port 60351 to guest port 80
2025-10-13 02:08:51 (17996): Enabling remote desktop for VM.
2025-10-13 02:08:52 (17996): Enabling shared directory for VM.
2025-10-13 02:08:53 (17996): Starting VM using VBoxManage interface. (boinc_46fdc9c3baf424db, slot#5)
2025-10-13 02:08:57 (17996): Successfully started VM. (PID = '23516')
2025-10-13 02:08:57 (17996): Reporting VM Process ID to BOINC.
2025-10-13 02:08:57 (17996): Guest Log: BIOS: VirtualBox 7.1.10
2025-10-13 02:08:57 (17996): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 02:08:57 (17996): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 02:08:57 (17996): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 02:08:57 (17996): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 02:08:57 (17996): Detected: Web Application Enabled (http://localhost:60351)
2025-10-13 02:08:57 (17996): Detected: Remote Desktop Enabled (localhost:60353)
2025-10-13 02:08:57 (17996): Preference change detected
2025-10-13 02:08:57 (17996): Setting CPU throttle for VM. (100%)
2025-10-13 02:08:57 (17996): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 480 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 02:08:59 (17996): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 02:08:59 (17996): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 02:09:02 (17996): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 02:09:02 (17996): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 02:09:02 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 02:09:09 (17996): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 02:09:09 (17996): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 02:09:13 (17996): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 02:09:13 (17996): Guest Log: 00:00:00.000137 main     Log opened 2025-10-13T02:09:10.778875000Z
2025-10-13 02:09:13 (17996): Guest Log: 00:00:00.000203 main     OS Product: Linux
2025-10-13 02:09:13 (17996): Guest Log: 00:00:00.000221 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 02:09:13 (17996): Guest Log: 00:00:00.000235 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 02:09:13 (17996): Guest Log: 00:00:00.000248 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 02:09:13 (17996): Guest Log: 00:00:00.000249 main     Process ID: 1296
2025-10-13 02:09:13 (17996): Guest Log: 00:00:00.000249 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 02:09:13 (17996): Guest Log: 00:00:00.000744 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 02:09:13 (17996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 02:09:13 (17996): Guest Log: [INFO] Mounting shared directory
2025-10-13 02:09:13 (17996): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 02:09:15 (17996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 02:09:15 (17996): Guest Log: [INFO] Detected branch: prod
2025-10-13 02:09:16 (17996): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 02:09:16 (17996): Guest Log: Copying input files
2025-10-13 02:09:16 (17996): Guest Log: Copied input files into RunAtlas.
2025-10-13 02:09:16 (17996): Guest Log: Detected user-configured HTTP proxy at http://treacle:3128 - will set in /etc/cvmfs/default.local
2025-10-13 02:09:23 (17996): Guest Log: 00:00:10.003330 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 252 492 000ns (GuestNow=1 760 317 762 529 285 000 ns GuestLast=1 760 321 350 781 777 000 ns fSetTimeLastLoop=true )
2025-10-13 02:09:37 (17996): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 02:09:37 (17996): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 02:09:37 (17996): Guest Log: 2.6.3.0 1573 0 29620 151642 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.15:3128 1
2025-10-13 02:09:38 (17996): Guest Log: copied the webapp to /var/www
2025-10-13 02:09:38 (17996): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-13 02:09:38 (17996): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-13 02:09:38 (17996): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 02:09:38 (17996): Guest Log:  *** Starting ATLAS job. (PandaID=6838913851 taskID=46676269) ***
2025-10-13 03:18:31 (17996): Guest Log:  *** Job finished ***
2025-10-13 03:18:31 (17996): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:02,653 | INFO     | [data] copytool_out thread has finished
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:03,637 | INFO     | [data] queue_monitor thread has finished
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:24,247 | INFO     | [monitor] cgroup control has ended
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:24,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242982848320)>', '<ExcThread(monitor, started 140242510124800)>']
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:25,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:25,561 | INFO     | [monitor] control thread has ended
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:29,956 | INFO     | all workflow threads have been joined
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:29,956 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:29,956 | INFO     | traces error code: 0
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:29,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,001 [wrapper] ==== pilot stdout END ====
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,004 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,007 [wrapper] pilotpid: 5989
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,009 [wrapper] Pilot exit status: 0
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,118 [wrapper] pandaids: 6838913851
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,136 [wrapper] cleanup supervisor_pilot 21661 5990
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,139 [wrapper] Test setup, not cleaning
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,142 [wrapper] apfmon messages muted
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,144 [wrapper] ==== wrapper stdout END ====
2025-10-13 03:18:31 (17996): Guest Log: 2025-10-13 02:18:30,147 [wrapper] ==== wrapper stderr END ====
2025-10-13 03:18:31 (17996): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 03:18:31 (17996): Guest Log:     "exeErrorCode": 0,
2025-10-13 03:18:31 (17996): Guest Log:     "exeErrorDiag": "",
2025-10-13 03:18:31 (17996): Guest Log:     "pilotErrorCode": 0,
2025-10-13 03:18:31 (17996): Guest Log:     "pilotErrorDiag": "",
2025-10-13 03:18:31 (17996): Guest Log:  *** Listing of results directory ***
2025-10-13 03:18:31 (17996): Guest Log: total 189816
2025-10-13 03:18:31 (17996): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 20:53 pilot3.tar.gz
2025-10-13 03:18:31 (17996): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 21:01 runpilot2-wrapper.sh
2025-10-13 03:18:31 (17996): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 21:01 queuedata.json
2025-10-13 03:18:31 (17996): Guest Log: -rwxr-xr-x. 1 atlas atlas      9083 Oct 13 01:09 init_data.xml
2025-10-13 03:18:31 (17996): Guest Log: -rwxr-xr-x. 1 atlas atlas    569671 Oct 13 01:09 input.tar.gz
2025-10-13 03:18:31 (17996): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 01:09 start_atlas.sh
2025-10-13 03:18:31 (17996): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 01:09 EVNT.46676267._002609.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 03:18:31 (17996): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Oct 13 01:09 pandaJob.out
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas    975603 Oct 13 01:12 agis_schedconf.cvmfs.json
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 01:12 agis_ddmendpoints.agis.ALL.json
2025-10-13 03:18:31 (17996): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 01:12 pilot3
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas 188929826 Oct 13 02:17 HITS.46676269._064948.pool.root.1
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 02:17 pilot_heartbeat.json
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas      1028 Oct 13 02:17 memory_monitor_summary.json
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas    237834 Oct 13 02:17 log.46676269._064948.job.log.tgz.1
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas      7776 Oct 13 02:17 heartbeat.json
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 13 02:18 pilotlog.txt
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas    565715 Oct 13 02:18 log.46676269._064948.job.log.1
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 02:18 output.list
2025-10-13 03:18:31 (17996): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 02:18 runtime_log
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas    819200 Oct 13 02:18 result.tar.gz
2025-10-13 03:18:31 (17996): Guest Log: -rw-r--r--. 1 atlas atlas      8662 Oct 13 02:18 runtime_log.err
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas       663 Oct 13 02:18 GbxLDmItvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmachNDmXvb6En.diag
2025-10-13 03:18:31 (17996): Guest Log: Looking for outputfile HITS.46676269._064948.pool.root.1
2025-10-13 03:18:31 (17996): Guest Log: HITS file was successfully produced
2025-10-13 03:18:31 (17996): Guest Log: -rw-------. 1 atlas atlas 188929826 Oct 13 02:17 /home/atlas/RunAtlas/HITS.46676269._064948.pool.root.1
2025-10-13 03:18:31 (17996): Guest Log: Successfully finished the ATLAS job!
2025-10-13 03:18:31 (17996): Guest Log: Copying the results back to the shared directory!
2025-10-13 03:18:31 (17996): Guest Log:  *** Contents of shared directory: ***
2025-10-13 03:18:31 (17996): Guest Log: total 400824
2025-10-13 03:18:31 (17996): Guest Log: -rwxrwxrwx. 1 root root 220087955 Oct 13 01:08 ATLAS.root_0
2025-10-13 03:18:31 (17996): Guest Log: -rwxrwxrwx. 1 root root 188929826 Oct 13 02:18 HITS.pool.root.1
2025-10-13 03:18:31 (17996): Guest Log: -rwxrwxrwx. 1 root root      9083 Oct 13 01:08 init_data.xml
2025-10-13 03:18:31 (17996): Guest Log: -rwxrwxrwx. 1 root root    569671 Oct 12 17:35 input.tar.gz
2025-10-13 03:18:31 (17996): Guest Log: -rwxrwxrwx. 1 root root    819200 Oct 13 02:18 result.tar.gz
2025-10-13 03:18:31 (17996): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 17:35 start_atlas.sh
2025-10-13 03:18:31 (17996): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 03:18:31 (17996): VM Completion File Detected.
2025-10-13 03:18:31 (17996): Powering off VM.
2025-10-13 03:18:31 (17996): Successfully stopped VM.
2025-10-13 03:18:31 (17996): Deregistering VM. (boinc_46fdc9c3baf424db, slot#5)
2025-10-13 03:18:32 (17996): Removing network bandwidth throttle group from VM.
2025-10-13 03:18:32 (17996): Removing VM from VirtualBox.
2025-10-13 03:18:37 (17996): called boinc_finish(0)

</stderr_txt>
]]>

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