Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:49:11 (1887761): wrapper (7.7.26015): starting
13:49:11 (1887761): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:49:11] Arguments: --nthreads 8
[2025-10-12 13:49:11] Threads: 8
[2025-10-12 13:49:11] Checking for CVMFS
[2025-10-12 13:49:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:49:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:49:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:49:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:49:12] 2.13.2.0 601499 129581 482052 151630 3 179 26215379 32935937 46782 16776704 0 460410365 99.683 379013810 16744 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 13:49:12] CVMFS is ok
[2025-10-12 13:49:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:49:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:49:12] Further information can be found at the LHC@home message board.
[2025-10-12 13:49:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:49:12] Checking for apptainer binary...
[2025-10-12 13:49:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:49:12] Running /usr/bin/apptainer --version
[2025-10-12 13:49:12] apptainer version 1.4.3-1.el9
[2025-10-12 13:49:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:49:12] c7-16-9.aglt2.org
[2025-10-12 13:49:12] apptainer works
[2025-10-12 13:49:12] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:49:12] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:49:12] Starting ATLAS job with PandaID=6840082233
[2025-10-12 13:49:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:09:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:09:51]  status=None
[2025-10-12 15:09:51]  status_code=0
[2025-10-12 15:09:51]  storage_token=
[2025-10-12 15:09:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840082233/log.46676269._080048.job.log.tgz.1
[2025-10-12 15:09:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/ef/log.46676269._080048.job.log.tgz.1
[2025-10-12 15:09:51]  workdir=None
[2025-10-12 15:09:51] ]
[2025-10-12 15:09:51] 2025-10-12 19:09:09,405 | INFO     | transferring file log.46676269._080048.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840082233/log.46676269._080048.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 15:09:51] 2025-10-12 19:09:09,405 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840082233/log.46676269._080048.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._080048.job
[2025-10-12 15:09:51] 2025-10-12 19:09:09,420 | INFO     | adding to output.list: log.46676269._080048.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/ef/log.46676269._080048.job.log.tg
[2025-10-12 15:09:51] 2025-10-12 19:09:09,421 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:09:51] 2025-10-12 19:09:09,421 | INFO     | summary of transferred files:
[2025-10-12 15:09:51] 2025-10-12 19:09:09,421 | INFO     |  -- lfn=log.46676269._080048.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:09:51] 2025-10-12 19:09:09,422 | INFO     | stage-out finished correctly
[2025-10-12 15:09:51] 2025-10-12 19:09:09,537 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:09:51] 2025-10-12 19:09:10,255 | INFO     | PID=1893257 has CPU usage=15.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 15:09:51] 2025-10-12 19:09:10,255 | INFO     | .. there are 58 such processes running
[2025-10-12 15:09:51] 2025-10-12 19:09:10,458 | INFO     | job 6840082233 has state=finished
[2025-10-12 15:09:51] 2025-10-12 19:09:10,459 | INFO     | preparing for final server update for job 6840082233 in state='finished'
[2025-10-12 15:09:51] 2025-10-12 19:09:10,459 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:09:51] 2025-10-12 19:09:10,460 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:09:51] 2025-10-12 19:09:10,460 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:09:51] 2025-10-12 19:09:10,460 | INFO     | job 6840082233 has finished - writing final server update
[2025-10-12 15:09:51] 2025-10-12 19:09:10,460 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:09:51] 2025-10-12 19:09:10,468 | INFO     | executing command: lscpu
[2025-10-12 15:09:51] 2025-10-12 19:09:10,548 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:09:51] 2025-10-12 19:09:11,246 | INFO     | monitor loop #330: job 0:6840082233 is in state 'finished'
[2025-10-12 15:09:51] 2025-10-12 19:09:11,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:09:51] 2025-10-12 19:09:11,256 | INFO     | time since job start (4785s) is within the limit (172800.0s)
[2025-10-12 15:09:51] 2025-10-12 19:09:13,262 | INFO     | time since job start (4787s) is within the limit (172800.0s)
[2025-10-12 15:09:51] 2025-10-12 19:09:13,750 | INFO     | monitor loop #331: job 0:6840082233 is in state 'finished'
[2025-10-12 15:09:51] 2025-10-12 19:09:13,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:09:51] 2025-10-12 19:09:15,268 | INFO     | time since job start (4789s) is within the limit (172800.0s)
[2025-10-12 15:09:51] 2025-10-12 19:09:16,257 | INFO     | monitor loop #332: job 0:6840082233 is in state 'finished'
[2025-10-12 15:09:51] 2025-10-12 19:09:16,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:09:51] 2025-10-12 19:09:17,275 | INFO     | time since job start (4791s) is within the limit (172800.0s)
[2025-10-12 15:09:51] 2025-10-12 19:09:18,017 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 15:09:51] 2025-10-12 19:09:18,022 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3243.8865833333325
[2025-10-12 15:09:51] 2025-10-12 19:09:18,035 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840082233/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:09:51] 2025-10-12 19:09:18,035 | INFO     | extracted standard info from prmon json
[2025-10-12 15:09:51] 2025-10-12 19:09:18,035 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:09:51] 2025-10-12 19:09:18,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:09:51] 2025-10-12 19:09:18,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:09:51] 2025-10-12 19:09:18,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:09:51] 2025-10-12 19:09:18,037 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:09:51] 2025-10-12 19:09:18,037 | INFO     | sum of square deviations: 110960220.0
[2025-10-12 15:09:51] 2025-10-12 19:09:18,037 | INFO     | sum of deviations: -6639604291.999999
[2025-10-12 15:09:51] 2025-10-12 19:09:18,037 | INFO     | mean x: 1760293838.0
[2025-10-12 15:09:51] 2025-10-12 19:09:18,038 | INFO     | mean y: 2264167.056338028
[2025-10-12 15:09:51] 2025-10-12 19:09:18,038 | INFO     | -- intersect: 105334197737.17679
[2025-10-12 15:09:51] 2025-10-12 19:09:18,038 | INFO     | intersect: 105334197737.17679
[2025-10-12 15:09:51] 2025-10-12 19:09:18,038 | INFO     | chi2: 0.1721772775053893
[2025-10-12 15:09:51] 2025-10-12 19:09:18,038 | INFO     | -- intersect: 105334197737.17679
[2025-10-12 15:09:51] 2025-10-12 19:09:18,038 | INFO     | current memory leak: -59.84 B/s (using 71 data points, chi2=0.17)
[2025-10-12 15:09:51] 2025-10-12 19:09:18,038 | INFO     | could have reported an average CPU frequency of 3259 MHz (6 samples)
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | ..............................
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | . Timing measurements:
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | . get job = 0 s
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | . initial setup = 2 s
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | . payload setup = 8 s
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | . stage-in = 0 s
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | . payload execution = 4753 s
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | . stage-out = 0 s
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | . log creation = 0 s
[2025-10-12 15:09:51] 2025-10-12 19:09:18,039 | INFO     | ..............................
[2025-10-12 15:09:51] 2025-10-12 19:09:18,304 | INFO     | 
[2025-10-12 15:09:51] 2025-10-12 19:09:18,304 | INFO     | job summary report
[2025-10-12 15:09:51] 2025-10-12 19:09:18,304 | INFO     | --------------------------------------------------
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | PanDA job id: 6840082233
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | task id: 46676269
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | errors: (none)
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | pilot state: finished 
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | transexitcode: 0
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | exeerrorcode: 0
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | exeerrordiag: 
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | exitcode: 0
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | exitmsg: OK
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | cpuconsumptiontime: 29783 s
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | nevents: 400
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | neventsw: 0
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | pid: 1902758
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | pgrp: 1902758
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | corecount: 8
[2025-10-12 15:09:51] 2025-10-12 19:09:18,305 | INFO     | event service: False
[2025-10-12 15:09:51] 2025-10-12 19:09:18,306 | INFO     | sizes: {0: 2348856, 6: 2349118, 11: 2349146, 4765: 2375398, 4766: 2384451, 4767: 2384451, 4775: 2384773}
[2025-10-12 15:09:51] 2025-10-12 19:09:18,306 | INFO     | --------------------------------------------------
[2025-10-12 15:09:51] 2025-10-12 19:09:18,306 | INFO     | 
[2025-10-12 15:09:51] 2025-10-12 19:09:18,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:09:51] 2025-10-12 19:09:18,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:09:51] 2025-10-12 19:09:18,330 | INFO     | job 6840082233 has completed (purged errors)
[2025-10-12 15:09:51] 2025-10-12 19:09:18,331 | INFO     | overall cleanup function is called
[2025-10-12 15:09:51] 2025-10-12 19:09:19,338 | INFO     | --- collectZombieJob: --- 10, [1902758]
[2025-10-12 15:09:51] 2025-10-12 19:09:19,338 | INFO     | zombie collector waiting for pid 1902758
[2025-10-12 15:09:51] 2025-10-12 19:09:19,338 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:09:51] 2025-10-12 19:09:19,338 | INFO     | collected zombie processes
[2025-10-12 15:09:51] 2025-10-12 19:09:19,339 | INFO     | will attempt to kill all subprocesses of pid=1902758
[2025-10-12 15:09:51] 2025-10-12 19:09:19,864 | INFO     | process IDs to be killed: [1902758] (in reverse order)
[2025-10-12 15:09:51] 2025-10-12 19:09:20,036 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:09:51] 2025-10-12 19:09:20,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:09:51] 2025-10-12 19:09:20,059 | INFO     | did not find any defunct processes belonging to 1902758
[2025-10-12 15:09:51] 2025-10-12 19:09:20,081 | INFO     | did not find any defunct processes belonging to 1902758
[2025-10-12 15:09:51] 2025-10-12 19:09:20,081 | INFO     | ready for new job
[2025-10-12 15:09:51] 2025-10-12 19:09:20,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:09:51] 2025-10-12 19:09:20,083 | INFO     | ***************************************
[2025-10-12 15:09:51] 2025-10-12 19:09:20,084 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:09:51] 2025-10-12 19:09:20,084 | INFO     | ***************************************
[2025-10-12 15:09:51] 2025-10-12 19:09:20,084 | INFO     | 
[2025-10-12 15:09:51] 2025-10-12 19:09:20,102 | INFO     | architecture information:
[2025-10-12 15:09:51] 2025-10-12 19:09:20,103 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:09:51] 2025-10-12 19:09:20,117 | INFO     | cat /etc/os-release:
[2025-10-12 15:09:51] NAME="CentOS Linux"
[2025-10-12 15:09:51] VERSION="7 (Core)"
[2025-10-12 15:09:51] ID="centos"
[2025-10-12 15:09:51] ID_LIKE="rhel fedora"
[2025-10-12 15:09:51] VERSION_ID="7"
[2025-10-12 15:09:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:09:51] ANSI_COLOR="0;31"
[2025-10-12 15:09:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:09:51] HOME_URL="https://www.centos.org/"
[2025-10-12 15:09:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:09:51] 
[2025-10-12 15:09:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:09:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:09:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:09:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:09:51] 
[2025-10-12 15:09:51] 2025-10-12 19:09:20,117 | INFO     | ***************************************
[2025-10-12 15:09:51] 2025-10-12 19:09:20,620 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:09:51] 2025-10-12 19:09:20,647 | INFO     | sufficient remaining disk space (73235693568 B)
[2025-10-12 15:09:51] 2025-10-12 19:09:20,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:09:51] 2025-10-12 19:09:20,648 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:09:51] 2025-10-12 19:09:20,648 | INFO     | update_server=False
[2025-10-12 15:09:51] 2025-10-12 19:09:20,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:09:51] 2025-10-12 19:09:20,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:09:51] 2025-10-12 19:09:20,648 | INFO     | aborting loop
[2025-10-12 15:09:51] 2025-10-12 19:09:20,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:09:51] 2025-10-12 19:09:20,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:09:51] 2025-10-12 19:09:20,706 | INFO     | all payload control threads have been joined
[2025-10-12 15:09:51] 2025-10-12 19:09:20,852 | INFO     | all data control threads have been joined
[2025-10-12 15:09:51] 2025-10-12 19:09:21,392 | INFO     | all job control threads have been joined
[2025-10-12 15:09:51] 2025-10-12 19:09:21,653 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:21,653 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:21,716 | INFO     | [payload] control thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:21,859 | INFO     | [data] control thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:22,034 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:22,057 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:22,169 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:22,398 | INFO     | [job] control thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:22,432 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:22,468 | INFO     | [job] validate thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:22,625 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:22,643 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:22,653 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:23,063 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:23,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:09:51] 2025-10-12 19:09:24,127 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:24,655 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:09:51] 2025-10-12 19:09:34,273 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:09:51] 2025-10-12 19:09:34,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140027522189120)>', '<ExcThread(monitor, started 140026696410880)>']
[2025-10-12 15:09:51] 2025-10-12 19:09:39,935 | INFO     | all workflow threads have been joined
[2025-10-12 15:09:51] 2025-10-12 19:09:39,935 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:09:51] 2025-10-12 19:09:39,936 | INFO     | traces error code: 0
[2025-10-12 15:09:51] 2025-10-12 19:09:39,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:09:51] 2025-10-12 19:09:51,026 | INFO     | PID=1893257 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:09:51] 2025-10-12 19:09:51,026 | INFO     | .. there are 58 such processes running
[2025-10-12 15:09:51] 2025-10-12 19:09:51,027 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:09:51] 2025-10-12 19:09:51,027 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:09:51] 2025-10-12 19:09:51,027 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:09:51] 2025-10-12 19:09:51,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:09:51] 2025-10-12 19:09:51,027 | INFO     | [monitor] control thread has ended
[2025-10-12 15:09:51] 2025-10-12 19:09:51,204 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:09:51] 2025-10-12 19:09:51,207 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:09:51] 2025-10-12 19:09:51,210 [wrapper] pilotpid: 1893257
[2025-10-12 15:09:51] 2025-10-12 19:09:51,212 [wrapper] Pilot exit status: 0
[2025-10-12 15:09:51] 2025-10-12 19:09:51,234 [wrapper] pandaids: 6840082233
[2025-10-12 15:09:51] 2025-10-12 19:09:51,380 [wrapper] cleanup supervisor_pilot 2371463 1893258
[2025-10-12 15:09:51] 2025-10-12 19:09:51,383 [wrapper] Test setup, not cleaning
[2025-10-12 15:09:51] 2025-10-12 19:09:51,385 [wrapper] apfmon messages muted
[2025-10-12 15:09:51] 2025-10-12 19:09:51,388 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:09:51] 2025-10-12 19:09:51,389 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:09:51]  *** Error codes and diagnostics ***
[2025-10-12 15:09:51]     "exeErrorCode": 0,
[2025-10-12 15:09:51]     "exeErrorDiag": "",
[2025-10-12 15:09:51]     "pilotErrorCode": 0,
[2025-10-12 15:09:51]     "pilotErrorDiag": "",
[2025-10-12 15:09:51]  *** Listing of results directory ***
[2025-10-12 15:09:51] total 402828
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:45 pilot3.tar.gz
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 09:53 queuedata.json
[2025-10-12 15:09:51] -rwx------. 1 boincer umatlas     36292 Oct 12 09:54 runpilot2-wrapper.sh
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:09:51] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:49 run_atlas
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:49 job.xml
[2025-10-12 15:09:51] -rw-r--r--. 2 boincer umatlas 218585656 Oct 12 13:49 EVNT.46676267._004048.pool.root.1
[2025-10-12 15:09:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:49 start_atlas.sh
[2025-10-12 15:09:51] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:49 shared
[2025-10-12 15:09:51] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 13:49 input.tar.gz
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:49 boinc_lockfile
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 13:49 pandaJob.out
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas    975528 Oct 12 13:49 agis_schedconf.cvmfs.json
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:09:51] drwx------. 5 boincer umatlas      4096 Oct 12 13:49 pilot3
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas 187980251 Oct 12 15:08 HITS.46676269._080048.pool.root.1
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas       529 Oct 12 15:08 boinc_task_state.xml
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas      1049 Oct 12 15:09 memory_monitor_summary.json
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas    327149 Oct 12 15:09 log.46676269._080048.job.log.tgz.1
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas      6936 Oct 12 15:09 init_data.xml
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas      7777 Oct 12 15:09 heartbeat.json
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:09 boinc_mmap_file
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:09 wrapper_checkpoint.txt
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas        95 Oct 12 15:09 pilot_heartbeat.json
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas       823 Oct 12 15:09 pilotlog.txt
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas    685527 Oct 12 15:09 log.46676269._080048.job.log.1
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas       357 Oct 12 15:09 output.list
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:09 runtime_log
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas   1034240 Oct 12 15:09 result.tar.gz
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 15:09 runtime_log.err
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas       652 Oct 12 15:09 qnhLDmihBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn7jNDmbarQon.diag
[2025-10-12 15:09:51] -rw-r--r--. 1 boincer umatlas     22100 Oct 12 15:09 stderr.txt
[2025-10-12 15:09:51] HITS file was successfully produced:
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas 187980251 Oct 12 15:08 shared/HITS.pool.root.1
[2025-10-12 15:09:51]  *** Contents of shared directory: ***
[2025-10-12 15:09:51] total 398636
[2025-10-12 15:09:51] -rw-r--r--. 2 boincer umatlas 218585656 Oct 12 13:49 ATLAS.root_0
[2025-10-12 15:09:51] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:49 start_atlas.sh
[2025-10-12 15:09:51] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 13:49 input.tar.gz
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas 187980251 Oct 12 15:08 HITS.pool.root.1
[2025-10-12 15:09:51] -rw-------. 1 boincer umatlas   1034240 Oct 12 15:09 result.tar.gz
15:09:52 (1887761): run_atlas exited; CPU time 29876.260182
15:09:52 (1887761): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN