Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:10:59 (30483): wrapper (7.7.26015): starting
13:10:59 (30483): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:10:59] Arguments: --nthreads 8
[2025-10-12 13:10:59] Threads: 8
[2025-10-12 13:10:59] Checking for CVMFS
[2025-10-12 13:10:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:10:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:10:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:10:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:10:59] 2.11.2.0 26213 1089 65028 151627 0 57 15370247 20275201 1 130560 0 824335 99.991 38424 40234 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:10:59] CVMFS is ok
[2025-10-12 13:10:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:10:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:10:59] Further information can be found at the LHC@home message board.
[2025-10-12 13:10:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:10:59] Checking for apptainer binary...
[2025-10-12 13:10:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:10:59] Running /usr/bin/apptainer --version
[2025-10-12 13:10:59] apptainer version 1.3.2-1.el7
[2025-10-12 13:10:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:11:01] c-115-4.aglt2.org
[2025-10-12 13:11:01] apptainer works
[2025-10-12 13:11:01] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:11:01] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:11:01] Starting ATLAS job with PandaID=6840081697
[2025-10-12 13:11:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:59:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:59:34] 2025-10-12 18:58:42,005 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:59:34] 2025-10-12 18:58:42,007 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:59:34] 2025-10-12 18:58:42,007 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,008 | INFO     | sum of deviations: 14385691243.999996
[2025-10-12 14:59:34] 2025-10-12 18:58:42,008 | INFO     | mean x: 1760292280.0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,008 | INFO     | mean y: 2487453.6476190477
[2025-10-12 14:59:34] 2025-10-12 18:58:42,008 | INFO     | -- intersect: -70549392664.13654
[2025-10-12 14:59:34] 2025-10-12 18:58:42,008 | INFO     | intersect: -70549392664.13654
[2025-10-12 14:59:34] 2025-10-12 18:58:42,008 | INFO     | chi2: 1.3333177327491206
[2025-10-12 14:59:34] 2025-10-12 18:58:42,009 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,009 | INFO     | sum of deviations: 13672963736.5
[2025-10-12 14:59:34] 2025-10-12 18:58:42,009 | INFO     | mean x: 1760292127.5
[2025-10-12 14:59:34] 2025-10-12 18:58:42,009 | INFO     | mean y: 2485228.25
[2025-10-12 14:59:34] 2025-10-12 18:58:42,009 | INFO     | -- intersect: -77624445725.91696
[2025-10-12 14:59:34] 2025-10-12 18:58:42,010 | INFO     | intersect: -77624445725.91696
[2025-10-12 14:59:34] 2025-10-12 18:58:42,010 | INFO     | chi2: 1.3351486196468574
[2025-10-12 14:59:34] 2025-10-12 18:58:42,010 | INFO     | current chi2=1.3351486196468574 (change=-0.1373181240124786 %)
[2025-10-12 14:59:34] 2025-10-12 18:58:42,010 | INFO     | right removable region: 99
[2025-10-12 14:59:34] 2025-10-12 18:58:42,010 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,011 | INFO     | sum of deviations: 328151360.50000006
[2025-10-12 14:59:34] 2025-10-12 18:58:42,011 | INFO     | mean x: 1760292432.5
[2025-10-12 14:59:34] 2025-10-12 18:58:42,011 | INFO     | mean y: 2530247.79
[2025-10-12 14:59:34] 2025-10-12 18:58:42,011 | INFO     | -- intersect: -1860517728.3950827
[2025-10-12 14:59:34] 2025-10-12 18:58:42,011 | INFO     | intersect: -1860517728.3950827
[2025-10-12 14:59:34] 2025-10-12 18:58:42,011 | INFO     | chi2: 0.029978072729994726
[2025-10-12 14:59:34] 2025-10-12 18:58:42,012 | INFO     | current chi2=0.029978072729994726 (change=97.75161823819863 %)
[2025-10-12 14:59:34] 2025-10-12 18:58:42,012 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,012 | INFO     | sum of deviations: -1320525498.9999998
[2025-10-12 14:59:34] 2025-10-12 18:58:42,012 | INFO     | mean x: 1760292585.0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,012 | INFO     | mean y: 2535764.9263157896
[2025-10-12 14:59:34] 2025-10-12 18:58:42,012 | INFO     | -- intersect: 8746946231.598797
[2025-10-12 14:59:34] 2025-10-12 18:58:42,013 | INFO     | intersect: 8746946231.598797
[2025-10-12 14:59:34] 2025-10-12 18:58:42,013 | INFO     | chi2: 0.0025923394084072533
[2025-10-12 14:59:34] 2025-10-12 18:58:42,013 | INFO     | current chi2=0.0025923394084072533 (change=91.35254813824815 %)
[2025-10-12 14:59:34] 2025-10-12 18:58:42,013 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 14:59:34] 2025-10-12 18:58:42,014 | INFO     | sum of deviations: -1206487798.5000002
[2025-10-12 14:59:34] 2025-10-12 18:58:42,014 | INFO     | mean x: 1760292737.5
[2025-10-12 14:59:34] 2025-10-12 18:58:42,014 | INFO     | mean y: 2535322.188888889
[2025-10-12 14:59:34] 2025-10-12 18:58:42,014 | INFO     | -- intersect: 9398805566.785576
[2025-10-12 14:59:34] 2025-10-12 18:58:42,014 | INFO     | intersect: 9398805566.785576
[2025-10-12 14:59:34] 2025-10-12 18:58:42,014 | INFO     | chi2: 0.0025488110680117314
[2025-10-12 14:59:34] 2025-10-12 18:58:42,014 | INFO     | current chi2=0.0025488110680117314 (change=1.6791142492512523 %)
[2025-10-12 14:59:34] 2025-10-12 18:58:42,014 | INFO     | left removable region: 30
[2025-10-12 14:59:34] 2025-10-12 18:58:42,015 | INFO     | sum of square deviations: 101843770.0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,015 | INFO     | sum of deviations: -322771800.99999994
[2025-10-12 14:59:34] 2025-10-12 18:58:42,015 | INFO     | mean x: 1760293012.0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,015 | INFO     | mean y: 2530734.202898551
[2025-10-12 14:59:34] 2025-10-12 18:58:42,015 | INFO     | -- intersect: 5581398698.055323
[2025-10-12 14:59:34] 2025-10-12 18:58:42,015 | INFO     | intersect: 5581398698.055323
[2025-10-12 14:59:34] 2025-10-12 18:58:42,016 | INFO     | chi2: 0.0018709638575942844
[2025-10-12 14:59:34] 2025-10-12 18:58:42,016 | INFO     | -- intersect: 5581398698.055323
[2025-10-12 14:59:34] 2025-10-12 18:58:42,016 | INFO     | current memory leak: -3.17 B/s (using 69 data points, chi2=0.00)
[2025-10-12 14:59:34] 2025-10-12 18:58:42,016 | INFO     | could have reported an average CPU frequency of 2097 MHz (7 samples)
[2025-10-12 14:59:34] 2025-10-12 18:58:42,016 | INFO     | ..............................
[2025-10-12 14:59:34] 2025-10-12 18:58:42,016 | INFO     | . Timing measurements:
[2025-10-12 14:59:34] 2025-10-12 18:58:42,017 | INFO     | . get job = 0 s
[2025-10-12 14:59:34] 2025-10-12 18:58:42,017 | INFO     | . initial setup = 2 s
[2025-10-12 14:59:34] 2025-10-12 18:58:42,017 | INFO     | . payload setup = 7 s
[2025-10-12 14:59:34] 2025-10-12 18:58:42,017 | INFO     | . stage-in = 0 s
[2025-10-12 14:59:34] 2025-10-12 18:58:42,017 | INFO     | . payload execution = 6402 s
[2025-10-12 14:59:34] 2025-10-12 18:58:42,017 | INFO     | . stage-out = 0 s
[2025-10-12 14:59:34] 2025-10-12 18:58:42,017 | INFO     | . log creation = 0 s
[2025-10-12 14:59:34] 2025-10-12 18:58:42,017 | INFO     | ..............................
[2025-10-12 14:59:34] 2025-10-12 18:58:42,103 | INFO     | 
[2025-10-12 14:59:34] 2025-10-12 18:58:42,103 | INFO     | job summary report
[2025-10-12 14:59:34] 2025-10-12 18:58:42,103 | INFO     | --------------------------------------------------
[2025-10-12 14:59:34] 2025-10-12 18:58:42,103 | INFO     | PanDA job id: 6840081697
[2025-10-12 14:59:34] 2025-10-12 18:58:42,103 | INFO     | task id: 46676269
[2025-10-12 14:59:34] 2025-10-12 18:58:42,104 | INFO     | errors: (none)
[2025-10-12 14:59:34] 2025-10-12 18:58:42,104 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:59:34] 2025-10-12 18:58:42,104 | INFO     | pilot state: finished 
[2025-10-12 14:59:34] 2025-10-12 18:58:42,104 | INFO     | transexitcode: 0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,104 | INFO     | exeerrorcode: 0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,104 | INFO     | exeerrordiag: 
[2025-10-12 14:59:34] 2025-10-12 18:58:42,104 | INFO     | exitcode: 0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,104 | INFO     | exitmsg: OK
[2025-10-12 14:59:34] 2025-10-12 18:58:42,104 | INFO     | cpuconsumptiontime: 47705 s
[2025-10-12 14:59:34] 2025-10-12 18:58:42,105 | INFO     | nevents: 400
[2025-10-12 14:59:34] 2025-10-12 18:58:42,105 | INFO     | neventsw: 0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,105 | INFO     | pid: 8828
[2025-10-12 14:59:34] 2025-10-12 18:58:42,105 | INFO     | pgrp: 8828
[2025-10-12 14:59:34] 2025-10-12 18:58:42,105 | INFO     | corecount: 8
[2025-10-12 14:59:34] 2025-10-12 18:58:42,105 | INFO     | event service: False
[2025-10-12 14:59:34] 2025-10-12 18:58:42,105 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 6414: 2376143, 6416: 2385141, 6417: 2385197, 6427: 2385519}
[2025-10-12 14:59:34] 2025-10-12 18:58:42,105 | INFO     | --------------------------------------------------
[2025-10-12 14:59:34] 2025-10-12 18:58:42,105 | INFO     | 
[2025-10-12 14:59:34] 2025-10-12 18:58:42,106 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:59:34] 2025-10-12 18:58:42,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,138 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,138 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,138 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,138 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:59:34] 2025-10-12 18:58:42,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,139 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:59:34] 2025-10-12 18:58:42,139 | INFO     | job 6840081697 has completed (purged errors)
[2025-10-12 14:59:34] 2025-10-12 18:58:42,140 | INFO     | overall cleanup function is called
[2025-10-12 14:59:34] 2025-10-12 18:58:43,144 | INFO     | --- collectZombieJob: --- 10, [8828]
[2025-10-12 14:59:34] 2025-10-12 18:58:43,145 | INFO     | zombie collector waiting for pid 8828
[2025-10-12 14:59:34] 2025-10-12 18:58:43,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:59:34] 2025-10-12 18:58:43,145 | INFO     | collected zombie processes
[2025-10-12 14:59:34] 2025-10-12 18:58:43,145 | INFO     | will attempt to kill all subprocesses of pid=8828
[2025-10-12 14:59:34] 2025-10-12 18:58:43,234 | INFO     | process IDs to be killed: [8828] (in reverse order)
[2025-10-12 14:59:34] 2025-10-12 18:58:43,292 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:59:34] 2025-10-12 18:58:43,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:59:34] 2025-10-12 18:58:43,299 | INFO     | did not find any defunct processes belonging to 8828
[2025-10-12 14:59:34] 2025-10-12 18:58:43,303 | INFO     | did not find any defunct processes belonging to 8828
[2025-10-12 14:59:34] 2025-10-12 18:58:43,303 | INFO     | ready for new job
[2025-10-12 14:59:34] 2025-10-12 18:58:43,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:59:34] 2025-10-12 18:58:43,304 | INFO     | ***************************************
[2025-10-12 14:59:34] 2025-10-12 18:58:43,305 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:59:34] 2025-10-12 18:58:43,305 | INFO     | ***************************************
[2025-10-12 14:59:34] 2025-10-12 18:58:43,305 | INFO     | 
[2025-10-12 14:59:34] 2025-10-12 18:58:43,305 | INFO     | architecture information:
[2025-10-12 14:59:34] 2025-10-12 18:58:43,306 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:59:34] 2025-10-12 18:58:43,327 | INFO     | cat /etc/os-release:
[2025-10-12 14:59:34] NAME="CentOS Linux"
[2025-10-12 14:59:34] VERSION="7 (Core)"
[2025-10-12 14:59:34] ID="centos"
[2025-10-12 14:59:34] ID_LIKE="rhel fedora"
[2025-10-12 14:59:34] VERSION_ID="7"
[2025-10-12 14:59:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:59:34] ANSI_COLOR="0;31"
[2025-10-12 14:59:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:59:34] HOME_URL="https://www.centos.org/"
[2025-10-12 14:59:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:59:34] 
[2025-10-12 14:59:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:59:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:59:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:59:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:59:34] 
[2025-10-12 14:59:34] 2025-10-12 18:58:43,327 | INFO     | ***************************************
[2025-10-12 14:59:34] 2025-10-12 18:58:43,830 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:59:34] 2025-10-12 18:58:43,852 | INFO     | sufficient remaining disk space (18599641088 B)
[2025-10-12 14:59:34] 2025-10-12 18:58:43,853 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:59:34] 2025-10-12 18:58:43,853 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:59:34] 2025-10-12 18:58:43,854 | INFO     | update_server=False
[2025-10-12 14:59:34] 2025-10-12 18:58:43,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:59:34] 2025-10-12 18:58:43,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:59:34] 2025-10-12 18:58:43,854 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:59:34] 2025-10-12 18:58:43,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:59:34] 2025-10-12 18:58:43,972 | INFO     | all job control threads have been joined
[2025-10-12 14:59:34] 2025-10-12 18:58:44,089 | INFO     | all payload control threads have been joined
[2025-10-12 14:59:34] 2025-10-12 18:58:44,330 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:59:34] 2025-10-12 18:58:44,330 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:59:34] 2025-10-12 18:58:44,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:59:34] 2025-10-12 18:58:44,342 | INFO     | will abort loop
[2025-10-12 14:59:34] 2025-10-12 18:58:44,859 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:44,861 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:44,906 | INFO     | all data control threads have been joined
[2025-10-12 14:59:34] 2025-10-12 18:58:44,978 | INFO     | [job] control thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:45,036 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:45,094 | INFO     | [payload] control thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:45,253 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:45,265 | INFO     | [job] validate thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:45,347 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:45,356 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:45,860 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:45,898 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:45,912 | INFO     | [data] control thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:46,159 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:46,291 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:47,861 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:58:54,366 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:59:34] 2025-10-12 18:58:55,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:59:34] 2025-10-12 18:59:14,092 | INFO     | PID=1907 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 14:59:34] 2025-10-12 18:59:14,093 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:59:34] 2025-10-12 18:59:14,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:59:34] 2025-10-12 18:59:14,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:59:34] 2025-10-12 18:59:28,253 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:59:34] 2025-10-12 18:59:28,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080940672832)>', '<ExcThread(monitor, started 140079745984256)>']
[2025-10-12 14:59:34] 2025-10-12 18:59:29,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:59:34] 2025-10-12 18:59:29,168 | INFO     | [monitor] control thread has ended
[2025-10-12 14:59:34] 2025-10-12 18:59:33,820 | INFO     | all workflow threads have been joined
[2025-10-12 14:59:34] 2025-10-12 18:59:33,821 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:59:34] 2025-10-12 18:59:33,821 | INFO     | traces error code: 0
[2025-10-12 14:59:34] 2025-10-12 18:59:33,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:59:34] 2025-10-12 18:59:33,947 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:59:34] 2025-10-12 18:59:33,952 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:59:34] 2025-10-12 18:59:33,957 [wrapper] pilotpid: 1907
[2025-10-12 14:59:34] 2025-10-12 18:59:33,962 [wrapper] Pilot exit status: 0
[2025-10-12 14:59:34] 2025-10-12 18:59:33,982 [wrapper] pandaids: 6840081697
[2025-10-12 14:59:34] 2025-10-12 18:59:34,031 [wrapper] cleanup supervisor_pilot  9713 1908
[2025-10-12 14:59:34] 2025-10-12 18:59:34,036 [wrapper] Test setup, not cleaning
[2025-10-12 14:59:34] 2025-10-12 18:59:34,040 [wrapper] apfmon messages muted
[2025-10-12 14:59:34] 2025-10-12 18:59:34,045 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:59:34] 2025-10-12 18:59:34,049 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:59:34]  *** Error codes and diagnostics ***
[2025-10-12 14:59:34]     "exeErrorCode": 0,
[2025-10-12 14:59:34]     "exeErrorDiag": "",
[2025-10-12 14:59:34]     "pilotErrorCode": 0,
[2025-10-12 14:59:34]     "pilotErrorDiag": "",
[2025-10-12 14:59:34]  *** Listing of results directory ***
[2025-10-12 14:59:34] total 408188
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:45 pilot3.tar.gz
[2025-10-12 14:59:34] -rwx------ 1 boincer umatlas     36292 Oct 12 09:47 runpilot2-wrapper.sh
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:47 queuedata.json
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:59:34] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:10 run_atlas
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:10 job.xml
[2025-10-12 14:59:34] -rw-r--r-- 2 boincer umatlas 221104998 Oct 12 13:10 EVNT.46676267._004035.pool.root.1
[2025-10-12 14:59:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:10 start_atlas.sh
[2025-10-12 14:59:34] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:10 shared
[2025-10-12 14:59:34] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 13:10 input.tar.gz
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:10 boinc_lockfile
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:11 pandaJob.out
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas    975528 Oct 12 13:11 agis_schedconf.cvmfs.json
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas   1560580 Oct 12 13:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:59:34] drwx------ 5 boincer umatlas      4096 Oct 12 13:11 pilot3
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 14:57 init_data.xml
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas 190443104 Oct 12 14:57 HITS.46676269._079852.pool.root.1
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas       529 Oct 12 14:58 boinc_task_state.xml
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas      1051 Oct 12 14:58 memory_monitor_summary.json
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas    354564 Oct 12 14:58 log.46676269._079852.job.log.tgz.1
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas      7856 Oct 12 14:58 heartbeat.json
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas        95 Oct 12 14:59 pilot_heartbeat.json
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:59 boinc_mmap_file
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas        27 Oct 12 14:59 wrapper_checkpoint.txt
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas      5003 Oct 12 14:59 pilotlog.txt
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas    912484 Oct 12 14:59 log.46676269._079852.job.log.1
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas       357 Oct 12 14:59 output.list
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:59 runtime_log
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas   1290240 Oct 12 14:59 result.tar.gz
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas       657 Oct 12 14:59 xARLDmgbBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv5jNDmnKR3lm.diag
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 14:59 runtime_log.err
[2025-10-12 14:59:34] -rw-r--r-- 1 boincer umatlas     20867 Oct 12 14:59 stderr.txt
[2025-10-12 14:59:34] HITS file was successfully produced:
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas 190443104 Oct 12 14:57 shared/HITS.pool.root.1
[2025-10-12 14:59:34]  *** Contents of shared directory: ***
[2025-10-12 14:59:34] total 403744
[2025-10-12 14:59:34] -rw-r--r-- 2 boincer umatlas 221104998 Oct 12 13:10 ATLAS.root_0
[2025-10-12 14:59:34] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:10 start_atlas.sh
[2025-10-12 14:59:34] -rw-r--r-- 2 boincer umatlas    569678 Oct 12 13:10 input.tar.gz
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas 190443104 Oct 12 14:57 HITS.pool.root.1
[2025-10-12 14:59:34] -rw------- 1 boincer umatlas   1290240 Oct 12 14:59 result.tar.gz
14:59:35 (30483): run_atlas exited; CPU time 47718.963443
14:59:35 (30483): called boinc_finish(0)

</stderr_txt>
]]>

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