Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:21:33 (2970277): wrapper (7.7.26015): starting
13:21:33 (2970277): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:21:33] Arguments: --nthreads 8
[2025-10-12 13:21:33] Threads: 8
[2025-10-12 13:21:33] Checking for CVMFS
[2025-10-12 13:21:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:21:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:21:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:21:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:21:35] 2.13.2.0 7513 77874 117132 151629 1 455 40583741 40960001 33099 16776704 0 467108548 99.757 291172475 46115 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:21:35] CVMFS is ok
[2025-10-12 13:21:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:21:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:21:35] Further information can be found at the LHC@home message board.
[2025-10-12 13:21:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:21:35] Checking for apptainer binary...
[2025-10-12 13:21:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:21:35] Running /usr/bin/apptainer --version
[2025-10-12 13:21:35] apptainer version 1.4.3-1.el9
[2025-10-12 13:21:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:21:36] c-208-40.aglt2.org
[2025-10-12 13:21:36] apptainer works
[2025-10-12 13:21:36] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:21:36] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:21:36] Starting ATLAS job with PandaID=6839591174
[2025-10-12 13:21:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:58:21]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:58:21] 2025-10-12 18:57:31,677 | INFO     | stage-out finished correctly
[2025-10-12 14:58:21] 2025-10-12 18:57:32,218 | WARNING  | process 2992270 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 14:58:21] 2025-10-12 18:57:32,219 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6839591174/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:58:21] 2025-10-12 18:57:32,597 | INFO     | number of running child processes to parent process 2992270: 1
[2025-10-12 14:58:21] 2025-10-12 18:57:32,597 | INFO     | maximum number of monitored processes: 8
[2025-10-12 14:58:21] 2025-10-12 18:57:33,199 | INFO     | time since job start (5679s) is within the limit (172800.0s)
[2025-10-12 14:58:21] 2025-10-12 18:57:34,582 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:58:21] 2025-10-12 18:57:34,682 | INFO     | job 6839591174 has state=finished
[2025-10-12 14:58:21] 2025-10-12 18:57:34,682 | INFO     | preparing for final server update for job 6839591174 in state='finished'
[2025-10-12 14:58:21] 2025-10-12 18:57:34,683 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:58:21] 2025-10-12 18:57:34,683 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:58:21] 2025-10-12 18:57:34,683 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:58:21] 2025-10-12 18:57:34,683 | INFO     | job 6839591174 has finished - writing final server update
[2025-10-12 14:58:21] 2025-10-12 18:57:34,683 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:58:21] 2025-10-12 18:57:34,684 | INFO     | executing command: lscpu
[2025-10-12 14:58:21] 2025-10-12 18:57:34,865 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:58:21] 2025-10-12 18:57:35,109 | INFO     | monitor loop #384: job 0:6839591174 is in state 'finished'
[2025-10-12 14:58:21] 2025-10-12 18:57:35,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:58:21] 2025-10-12 18:57:35,205 | INFO     | time since job start (5681s) is within the limit (172800.0s)
[2025-10-12 14:58:21] 2025-10-12 18:57:37,215 | INFO     | time since job start (5683s) is within the limit (172800.0s)
[2025-10-12 14:58:21] 2025-10-12 18:57:37,613 | INFO     | monitor loop #385: job 0:6839591174 is in state 'finished'
[2025-10-12 14:58:21] 2025-10-12 18:57:37,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:58:21] 2025-10-12 18:57:39,225 | INFO     | time since job start (5685s) is within the limit (172800.0s)
[2025-10-12 14:58:21] 2025-10-12 18:57:40,118 | INFO     | monitor loop #386: job 0:6839591174 is in state 'finished'
[2025-10-12 14:58:21] 2025-10-12 18:57:40,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:58:21] 2025-10-12 18:57:41,231 | INFO     | time since job start (5687s) is within the limit (172800.0s)
[2025-10-12 14:58:21] 2025-10-12 18:57:42,623 | INFO     | monitor loop #387: job 0:6839591174 is in state 'finished'
[2025-10-12 14:58:21] 2025-10-12 18:57:42,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:58:21] 2025-10-12 18:57:43,238 | INFO     | time since job start (5689s) is within the limit (172800.0s)
[2025-10-12 14:58:21] 2025-10-12 18:57:45,129 | INFO     | monitor loop #388: job 0:6839591174 is in state 'finished'
[2025-10-12 14:58:21] 2025-10-12 18:57:45,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:58:21] 2025-10-12 18:57:45,245 | INFO     | time since job start (5691s) is within the limit (172800.0s)
[2025-10-12 14:58:21] 2025-10-12 18:57:47,254 | INFO     | time since job start (5693s) is within the limit (172800.0s)
[2025-10-12 14:58:21] 2025-10-12 18:57:47,482 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 14:58:21] 2025-10-12 18:57:47,487 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.989421874999
[2025-10-12 14:58:21] 2025-10-12 18:57:47,500 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6839591174/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:58:21] 2025-10-12 18:57:47,501 | INFO     | extracted standard info from prmon json
[2025-10-12 14:58:21] 2025-10-12 18:57:47,501 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:58:21] 2025-10-12 18:57:47,501 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:58:21] 2025-10-12 18:57:47,501 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:58:21] 2025-10-12 18:57:47,501 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | sum of square deviations: 183751036.8928575
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | sum of deviations: 10008216484.892857
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | mean x: 1760292782.5357144
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | mean y: 2449495.869047619
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | -- intersect: -95873968631.14426
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | intersect: -95873968631.14426
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | chi2: 0.6899222046862371
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | -- intersect: -95873968631.14426
[2025-10-12 14:58:21] 2025-10-12 18:57:47,503 | INFO     | current memory leak: 54.47 B/s (using 84 data points, chi2=0.69)
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | could have reported an average CPU frequency of 3787 MHz (7 samples)
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | ..............................
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | . Timing measurements:
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | . get job = 0 s
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | . initial setup = 6 s
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | . payload setup = 59 s
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | . stage-in = 0 s
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | . payload execution = 5535 s
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | . stage-out = 0 s
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | . log creation = 0 s
[2025-10-12 14:58:21] 2025-10-12 18:57:47,504 | INFO     | ..............................
[2025-10-12 14:58:21] 2025-10-12 18:57:47,563 | INFO     | 
[2025-10-12 14:58:21] 2025-10-12 18:57:47,563 | INFO     | job summary report
[2025-10-12 14:58:21] 2025-10-12 18:57:47,563 | INFO     | --------------------------------------------------
[2025-10-12 14:58:21] 2025-10-12 18:57:47,563 | INFO     | PanDA job id: 6839591174
[2025-10-12 14:58:21] 2025-10-12 18:57:47,563 | INFO     | task id: 46676269
[2025-10-12 14:58:21] 2025-10-12 18:57:47,563 | INFO     | errors: (none)
[2025-10-12 14:58:21] 2025-10-12 18:57:47,563 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:58:21] 2025-10-12 18:57:47,563 | INFO     | pilot state: finished 
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | transexitcode: 0
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | exeerrorcode: 0
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | exeerrordiag: 
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | exitcode: 0
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | exitmsg: OK
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | cpuconsumptiontime: 23767 s
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | nevents: 400
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | neventsw: 0
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | pid: 2992270
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | pgrp: 2992270
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | corecount: 8
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | event service: False
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 12: 2348913, 23: 2348941, 34: 2349387, 45: 2349387, 5598: 2376062, 5600: 2385060, 5603: 2385116, 5616: 2385310}
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | --------------------------------------------------
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | 
[2025-10-12 14:58:21] 2025-10-12 18:57:47,564 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-12 14:58:21] 2025-10-12 18:57:47,668 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,668 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | job 6839591174 has completed (purged errors)
[2025-10-12 14:58:21] 2025-10-12 18:57:47,669 | INFO     | overall cleanup function is called
[2025-10-12 14:58:21] 2025-10-12 18:57:48,677 | INFO     | --- collectZombieJob: --- 10, [2992270]
[2025-10-12 14:58:21] 2025-10-12 18:57:48,680 | INFO     | zombie collector waiting for pid 2992270
[2025-10-12 14:58:21] 2025-10-12 18:57:48,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:58:21] 2025-10-12 18:57:48,680 | INFO     | collected zombie processes
[2025-10-12 14:58:21] 2025-10-12 18:57:48,680 | INFO     | will attempt to kill all subprocesses of pid=2992270
[2025-10-12 14:58:21] 2025-10-12 18:57:49,120 | INFO     | process IDs to be killed: [2992270] (in reverse order)
[2025-10-12 14:58:21] 2025-10-12 18:57:49,368 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:58:21] 2025-10-12 18:57:49,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:58:21] 2025-10-12 18:57:49,395 | INFO     | did not find any defunct processes belonging to 2992270
[2025-10-12 14:58:21] 2025-10-12 18:57:49,416 | INFO     | did not find any defunct processes belonging to 2992270
[2025-10-12 14:58:21] 2025-10-12 18:57:49,417 | INFO     | ready for new job
[2025-10-12 14:58:21] 2025-10-12 18:57:49,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:58:21] 2025-10-12 18:57:49,418 | INFO     | ***************************************
[2025-10-12 14:58:21] 2025-10-12 18:57:49,418 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:58:21] 2025-10-12 18:57:49,418 | INFO     | ***************************************
[2025-10-12 14:58:21] 2025-10-12 18:57:49,418 | INFO     | 
[2025-10-12 14:58:21] 2025-10-12 18:57:49,423 | INFO     | architecture information:
[2025-10-12 14:58:21] 2025-10-12 18:57:49,423 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:58:21] 2025-10-12 18:57:49,449 | INFO     | cat /etc/os-release:
[2025-10-12 14:58:21] NAME="CentOS Linux"
[2025-10-12 14:58:21] VERSION="7 (Core)"
[2025-10-12 14:58:21] ID="centos"
[2025-10-12 14:58:21] ID_LIKE="rhel fedora"
[2025-10-12 14:58:21] VERSION_ID="7"
[2025-10-12 14:58:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:58:21] ANSI_COLOR="0;31"
[2025-10-12 14:58:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:58:21] HOME_URL="https://www.centos.org/"
[2025-10-12 14:58:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:58:21] 
[2025-10-12 14:58:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:58:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:58:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:58:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:58:21] 
[2025-10-12 14:58:21] 2025-10-12 18:57:49,449 | INFO     | ***************************************
[2025-10-12 14:58:21] 2025-10-12 18:57:49,952 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-12 14:58:21] 2025-10-12 18:57:50,046 | INFO     | sufficient remaining disk space (170822467584 B)
[2025-10-12 14:58:21] 2025-10-12 18:57:50,047 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:58:21] 2025-10-12 18:57:50,047 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:58:21] 2025-10-12 18:57:50,047 | INFO     | update_server=False
[2025-10-12 14:58:21] 2025-10-12 18:57:50,047 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:58:21] 2025-10-12 18:57:50,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:58:21] 2025-10-12 18:57:50,047 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:58:21] 2025-10-12 18:57:50,138 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:58:21] 2025-10-12 18:57:50,138 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:58:21] 2025-10-12 18:57:50,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:58:21] 2025-10-12 18:57:50,138 | INFO     | will abort loop
[2025-10-12 14:58:21] 2025-10-12 18:57:50,583 | INFO     | all data control threads have been joined
[2025-10-12 14:58:21] 2025-10-12 18:57:50,878 | INFO     | all payload control threads have been joined
[2025-10-12 14:58:21] 2025-10-12 18:57:51,053 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:51,117 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:51,144 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:51,300 | INFO     | [job] validate thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:51,427 | INFO     | all job control threads have been joined
[2025-10-12 14:58:21] 2025-10-12 18:57:51,565 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:51,588 | INFO     | [data] control thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:51,604 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:51,882 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:51,885 | INFO     | [payload] control thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:52,042 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:52,054 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:52,124 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:52,433 | INFO     | [job] control thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:52,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:58:21] 2025-10-12 18:57:53,581 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:57:54,054 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:58:00,904 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:58:21] 2025-10-12 18:58:01,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:58:21] 2025-10-12 18:58:03,026 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:58:21] 2025-10-12 18:58:04,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489181116224)>', '<ExcThread(monitor, started 140488246032128)>']
[2025-10-12 14:58:21] 2025-10-12 18:58:09,128 | INFO     | all workflow threads have been joined
[2025-10-12 14:58:21] 2025-10-12 18:58:09,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:58:21] 2025-10-12 18:58:09,128 | INFO     | traces error code: 0
[2025-10-12 14:58:21] 2025-10-12 18:58:09,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:58:21] 2025-10-12 18:58:20,855 | INFO     | PID=2975063 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:58:21] 2025-10-12 18:58:20,855 | INFO     | .. there are 33 such processes running
[2025-10-12 14:58:21] 2025-10-12 18:58:20,855 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:58:21] 2025-10-12 18:58:20,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:58:21] 2025-10-12 18:58:20,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:58:21] 2025-10-12 18:58:20,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:58:21] 2025-10-12 18:58:20,856 | INFO     | [monitor] control thread has ended
[2025-10-12 14:58:21] 2025-10-12 18:58:21,012 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:58:21] 2025-10-12 18:58:21,015 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:58:21] 2025-10-12 18:58:21,034 [wrapper] pilotpid: 2975063
[2025-10-12 14:58:21] 2025-10-12 18:58:21,037 [wrapper] Pilot exit status: 0
[2025-10-12 14:58:21] 2025-10-12 18:58:21,110 [wrapper] pandaids: 6839591174
[2025-10-12 14:58:21] 2025-10-12 18:58:21,294 [wrapper] cleanup supervisor_pilot 3370265 2975064
[2025-10-12 14:58:21] 2025-10-12 18:58:21,297 [wrapper] Test setup, not cleaning
[2025-10-12 14:58:21] 2025-10-12 18:58:21,304 [wrapper] apfmon messages muted
[2025-10-12 14:58:21] 2025-10-12 18:58:21,312 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:58:21] 2025-10-12 18:58:21,321 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:58:21]  *** Error codes and diagnostics ***
[2025-10-12 14:58:21]     "exeErrorCode": 0,
[2025-10-12 14:58:21]     "exeErrorDiag": "",
[2025-10-12 14:58:21]     "pilotErrorCode": 0,
[2025-10-12 14:58:21]     "pilotErrorDiag": "",
[2025-10-12 14:58:21]  *** Listing of results directory ***
[2025-10-12 14:58:21] total 417200
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 02:28 queuedata.json
[2025-10-12 14:58:21] -rwx------. 1 boincer umatlas     36292 Oct 12 02:31 runpilot2-wrapper.sh
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:58:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:21 run_atlas
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:21 job.xml
[2025-10-12 14:58:21] -rw-r--r--. 2 boincer umatlas 224166704 Oct 12 13:21 EVNT.46676267._004507.pool.root.1
[2025-10-12 14:58:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:21 start_atlas.sh
[2025-10-12 14:58:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:21 shared
[2025-10-12 14:58:21] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 13:21 input.tar.gz
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:21 boinc_lockfile
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 13:21 pandaJob.out
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas    975528 Oct 12 13:22 agis_schedconf.cvmfs.json
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:58:21] drwx------. 5 boincer umatlas      4096 Oct 12 13:22 pilot3
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 14:56 init_data.xml
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas 196929664 Oct 12 14:56 HITS.46676269._072606.pool.root.1
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas       530 Oct 12 14:57 boinc_task_state.xml
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas      1051 Oct 12 14:57 memory_monitor_summary.json
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas    341360 Oct 12 14:57 log.46676269._072606.job.log.tgz.1
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas        95 Oct 12 14:57 pilot_heartbeat.json
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas      7811 Oct 12 14:57 heartbeat.json
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:58 boinc_mmap_file
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas        27 Oct 12 14:58 wrapper_checkpoint.txt
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas       823 Oct 12 14:58 pilotlog.txt
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas    762902 Oct 12 14:58 log.46676269._072606.job.log.1
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas       357 Oct 12 14:58 output.list
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:58 runtime_log
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas   1126400 Oct 12 14:58 result.tar.gz
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 14:58 runtime_log.err
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas       657 Oct 12 14:58 GVBMDmwm4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTriNDmcehkUo.diag
[2025-10-12 14:58:21] -rw-r--r--. 1 boincer umatlas     22186 Oct 12 14:58 stderr.txt
[2025-10-12 14:58:21] HITS file was successfully produced:
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas 196929664 Oct 12 14:56 shared/HITS.pool.root.1
[2025-10-12 14:58:21]  *** Contents of shared directory: ***
[2025-10-12 14:58:21] total 412916
[2025-10-12 14:58:21] -rw-r--r--. 2 boincer umatlas 224166704 Oct 12 13:21 ATLAS.root_0
[2025-10-12 14:58:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:21 start_atlas.sh
[2025-10-12 14:58:21] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 13:21 input.tar.gz
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas 196929664 Oct 12 14:56 HITS.pool.root.1
[2025-10-12 14:58:21] -rw-------. 1 boincer umatlas   1126400 Oct 12 14:58 result.tar.gz
14:58:23 (2970277): run_atlas exited; CPU time 23934.278884
14:58:23 (2970277): called boinc_finish(0)

</stderr_txt>
]]>

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