Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:51:58 (609522): wrapper (7.7.26015): starting
13:51:58 (609522): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 13:51:58] Arguments: --nthreads 10
[2025-10-12 13:51:58] Threads: 10
[2025-10-12 13:51:58] Checking for CVMFS
[2025-10-12 13:51:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:51:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:51:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:51:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:51:58] 2.13.2.0 2163181 7404 227288 151630 2 181 38135758 40960001 21767 16776704 0 22591710 99.747 15077500 21292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 13:51:58] CVMFS is ok
[2025-10-12 13:51:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:51:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:51:58] Further information can be found at the LHC@home message board.
[2025-10-12 13:51:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:51:58] Checking for apptainer binary...
[2025-10-12 13:51:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:51:58] Running /usr/bin/apptainer --version
[2025-10-12 13:51:58] apptainer version 1.4.3-1.el9
[2025-10-12 13:51:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:51:59] c7-10-12.aglt2.org
[2025-10-12 13:51:59] apptainer works
[2025-10-12 13:51:59] Set ATHENA_PROC_NUMBER=10
[2025-10-12 13:51:59] Set ATHENA_CORE_NUMBER=10
[2025-10-12 13:51:59] Starting ATLAS job with PandaID=6840225538
[2025-10-12 13:51:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:03:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:03:02] 2025-10-12 19:52:01,086 | INFO     | chi2: 1.6125577291182647
[2025-10-12 17:03:02] 2025-10-12 19:52:01,087 | INFO     | sum of square deviations: 424049677.85585696
[2025-10-12 17:03:02] 2025-10-12 19:52:01,087 | INFO     | sum of deviations: 12065439771.621624
[2025-10-12 17:03:02] 2025-10-12 19:52:01,087 | INFO     | mean x: 1760294999.036036
[2025-10-12 17:03:02] 2025-10-12 19:52:01,087 | INFO     | mean y: 2232406.5945945946
[2025-10-12 17:03:02] 2025-10-12 19:52:01,087 | INFO     | -- intersect: -50083251441.77543
[2025-10-12 17:03:02] 2025-10-12 19:52:01,087 | INFO     | intersect: -50083251441.77543
[2025-10-12 17:03:02] 2025-10-12 19:52:01,087 | INFO     | chi2: 1.6149487308130697
[2025-10-12 17:03:02] 2025-10-12 19:52:01,088 | INFO     | current chi2=1.6149487308130697 (change=-0.1482738665184023 %)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,088 | INFO     | right removable region: 110
[2025-10-12 17:03:02] 2025-10-12 19:52:01,088 | INFO     | sum of square deviations: 424047237.85585696
[2025-10-12 17:03:02] 2025-10-12 19:52:01,088 | INFO     | sum of deviations: -3393869261.6126103
[2025-10-12 17:03:02] 2025-10-12 19:52:01,088 | INFO     | mean x: 1760295304.036036
[2025-10-12 17:03:02] 2025-10-12 19:52:01,088 | INFO     | mean y: 2272188.153153153
[2025-10-12 17:03:02] 2025-10-12 19:52:01,088 | INFO     | -- intersect: 14090825515.223036
[2025-10-12 17:03:02] 2025-10-12 19:52:01,089 | INFO     | intersect: 14090825515.223036
[2025-10-12 17:03:02] 2025-10-12 19:52:01,089 | INFO     | chi2: 0.1891073733401683
[2025-10-12 17:03:02] 2025-10-12 19:52:01,089 | INFO     | current chi2=0.1891073733401683 (change=88.27283080007493 %)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,089 | INFO     | sum of square deviations: 369288970.4150944
[2025-10-12 17:03:02] 2025-10-12 19:52:01,089 | INFO     | sum of deviations: 1278415880.54717
[2025-10-12 17:03:02] 2025-10-12 19:52:01,089 | INFO     | mean x: 1760295456.528302
[2025-10-12 17:03:02] 2025-10-12 19:52:01,089 | INFO     | mean y: 2259111.150943396
[2025-10-12 17:03:02] 2025-10-12 19:52:01,090 | INFO     | -- intersect: -6091585672.654245
[2025-10-12 17:03:02] 2025-10-12 19:52:01,090 | INFO     | intersect: -6091585672.654245
[2025-10-12 17:03:02] 2025-10-12 19:52:01,090 | INFO     | chi2: 0.11801345490878529
[2025-10-12 17:03:02] 2025-10-12 19:52:01,090 | INFO     | current chi2=0.11801345490878529 (change=37.594471952978026 %)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,090 | INFO     | sum of square deviations: 319454562.9108916
[2025-10-12 17:03:02] 2025-10-12 19:52:01,090 | INFO     | sum of deviations: 4656693135.970297
[2025-10-12 17:03:02] 2025-10-12 19:52:01,090 | INFO     | mean x: 1760295609.029703
[2025-10-12 17:03:02] 2025-10-12 19:52:01,091 | INFO     | mean y: 2248978.00990099
[2025-10-12 17:03:02] 2025-10-12 19:52:01,091 | INFO     | -- intersect: -25657602004.096058
[2025-10-12 17:03:02] 2025-10-12 19:52:01,091 | INFO     | intersect: -25657602004.096058
[2025-10-12 17:03:02] 2025-10-12 19:52:01,091 | INFO     | chi2: 0.022731655238079625
[2025-10-12 17:03:02] 2025-10-12 19:52:01,091 | INFO     | current chi2=0.022731655238079625 (change=80.7380817249615 %)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,091 | INFO     | sum of square deviations: 274317917.90625
[2025-10-12 17:03:02] 2025-10-12 19:52:01,091 | INFO     | sum of deviations: 3913685358.375
[2025-10-12 17:03:02] 2025-10-12 19:52:01,091 | INFO     | mean x: 1760295761.53125
[2025-10-12 17:03:02] 2025-10-12 19:52:01,092 | INFO     | mean y: 2251527.2083333335
[2025-10-12 17:03:02] 2025-10-12 19:52:01,092 | INFO     | -- intersect: -25111834351.311893
[2025-10-12 17:03:02] 2025-10-12 19:52:01,092 | INFO     | intersect: -25111834351.311893
[2025-10-12 17:03:02] 2025-10-12 19:52:01,092 | INFO     | chi2: 0.021399002018585255
[2025-10-12 17:03:02] 2025-10-12 19:52:01,092 | INFO     | current chi2=0.021399002018585255 (change=5.8625436886880795 %)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,092 | INFO     | left removable region: 40
[2025-10-12 17:03:02] 2025-10-12 19:52:01,092 | INFO     | sum of square deviations: 106340113.37142862
[2025-10-12 17:03:02] 2025-10-12 19:52:01,092 | INFO     | sum of deviations: 1418253731.085714
[2025-10-12 17:03:02] 2025-10-12 19:52:01,092 | INFO     | mean x: 1760296188.5428572
[2025-10-12 17:03:02] 2025-10-12 19:52:01,093 | INFO     | mean y: 2264168.4714285713
[2025-10-12 17:03:02] 2025-10-12 19:52:01,093 | INFO     | -- intersect: -23474733909.35495
[2025-10-12 17:03:02] 2025-10-12 19:52:01,093 | INFO     | intersect: -23474733909.35495
[2025-10-12 17:03:02] 2025-10-12 19:52:01,093 | INFO     | chi2: 0.012601248898308633
[2025-10-12 17:03:02] 2025-10-12 19:52:01,093 | INFO     | -- intersect: -23474733909.35495
[2025-10-12 17:03:02] 2025-10-12 19:52:01,093 | INFO     | current memory leak: 13.34 B/s (using 70 data points, chi2=0.01)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,093 | INFO     | could have reported an average CPU frequency of 3231 MHz (7 samples)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,093 | INFO     | ..............................
[2025-10-12 17:03:02] 2025-10-12 19:52:01,094 | INFO     | . Timing measurements:
[2025-10-12 17:03:02] 2025-10-12 19:52:01,094 | INFO     | . get job = 0 s
[2025-10-12 17:03:02] 2025-10-12 19:52:01,094 | INFO     | . initial setup = 4 s
[2025-10-12 17:03:02] 2025-10-12 19:52:01,094 | INFO     | . payload setup = 31 s
[2025-10-12 17:03:02] 2025-10-12 19:52:01,094 | INFO     | . stage-in = 0 s
[2025-10-12 17:03:02] 2025-10-12 19:52:01,094 | INFO     | . payload execution = 7071 s
[2025-10-12 17:03:02] 2025-10-12 19:52:01,094 | INFO     | . stage-out = 0 s
[2025-10-12 17:03:02] 2025-10-12 19:52:01,094 | INFO     | . log creation = 0 s
[2025-10-12 17:03:02] 2025-10-12 19:52:01,094 | INFO     | ..............................
[2025-10-12 17:03:02] 2025-10-12 19:52:01,722 | INFO     | 
[2025-10-12 17:03:02] 2025-10-12 19:52:01,722 | INFO     | job summary report
[2025-10-12 17:03:02] 2025-10-12 19:52:01,722 | INFO     | --------------------------------------------------
[2025-10-12 17:03:02] 2025-10-12 19:52:01,722 | INFO     | PanDA job id: 6840225538
[2025-10-12 17:03:02] 2025-10-12 19:52:01,722 | INFO     | task id: 46676269
[2025-10-12 17:03:02] 2025-10-12 19:52:01,722 | INFO     | errors: (none)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | pilot state: finished 
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | transexitcode: 0
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | exeerrorcode: 0
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | exeerrordiag: 
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | exitcode: 0
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | exitmsg: OK
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | cpuconsumptiontime: 34016 s
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | nevents: 400
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | neventsw: 0
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | pid: 624352
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | pgrp: 624352
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | corecount: 10
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | event service: False
[2025-10-12 17:03:02] 2025-10-12 19:52:01,723 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 17: 2349175, 22: 2349203, 7107: 2376867, 7108: 2385865, 7110: 2385921, 7124: 2386115}
[2025-10-12 17:03:02] 2025-10-12 19:52:01,724 | INFO     | --------------------------------------------------
[2025-10-12 17:03:02] 2025-10-12 19:52:01,724 | INFO     | 
[2025-10-12 17:03:02] 2025-10-12 19:52:01,747 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 17:03:02] 2025-10-12 19:52:01,785 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:03:02] 2025-10-12 19:52:01,787 | INFO     | job 6840225538 has completed (purged errors)
[2025-10-12 17:03:02] 2025-10-12 19:52:01,787 | INFO     | overall cleanup function is called
[2025-10-12 17:03:02] 2025-10-12 19:52:02,820 | INFO     | --- collectZombieJob: --- 10, [624352]
[2025-10-12 17:03:02] 2025-10-12 19:52:02,820 | INFO     | zombie collector waiting for pid 624352
[2025-10-12 17:03:02] 2025-10-12 19:52:02,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:03:02] 2025-10-12 19:52:02,820 | INFO     | collected zombie processes
[2025-10-12 17:03:02] 2025-10-12 19:52:02,820 | INFO     | will attempt to kill all subprocesses of pid=624352
[2025-10-12 17:03:02] 2025-10-12 19:52:03,274 | INFO     | process IDs to be killed: [624352] (in reverse order)
[2025-10-12 17:03:02] 2025-10-12 19:52:03,571 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:03:02] 2025-10-12 19:52:03,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:03:02] 2025-10-12 19:52:03,586 | INFO     | did not find any defunct processes belonging to 624352
[2025-10-12 17:03:02] 2025-10-12 19:52:03,601 | INFO     | did not find any defunct processes belonging to 624352
[2025-10-12 17:03:02] 2025-10-12 19:52:03,601 | INFO     | ready for new job
[2025-10-12 17:03:02] 2025-10-12 19:52:03,601 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:03:02] 2025-10-12 19:52:03,603 | INFO     | ***************************************
[2025-10-12 17:03:02] 2025-10-12 19:52:03,603 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:03:02] 2025-10-12 19:52:03,603 | INFO     | ***************************************
[2025-10-12 17:03:02] 2025-10-12 19:52:03,603 | INFO     | 
[2025-10-12 17:03:02] 2025-10-12 19:52:03,620 | INFO     | architecture information:
[2025-10-12 17:03:02] 2025-10-12 19:52:03,624 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:03:02] 2025-10-12 19:52:03,653 | INFO     | cat /etc/os-release:
[2025-10-12 17:03:02] NAME="CentOS Linux"
[2025-10-12 17:03:02] VERSION="7 (Core)"
[2025-10-12 17:03:02] ID="centos"
[2025-10-12 17:03:02] ID_LIKE="rhel fedora"
[2025-10-12 17:03:02] VERSION_ID="7"
[2025-10-12 17:03:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:03:02] ANSI_COLOR="0;31"
[2025-10-12 17:03:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:03:02] HOME_URL="https://www.centos.org/"
[2025-10-12 17:03:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:03:02] 
[2025-10-12 17:03:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:03:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:03:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:03:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:03:02] 
[2025-10-12 17:03:02] 2025-10-12 19:52:03,653 | INFO     | ***************************************
[2025-10-12 17:03:02] 2025-10-12 19:52:04,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 17:03:02] 2025-10-12 19:52:04,186 | INFO     | sufficient remaining disk space (83451969536 B)
[2025-10-12 17:03:02] 2025-10-12 19:52:04,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:03:02] 2025-10-12 19:52:04,186 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:03:02] 2025-10-12 19:52:04,186 | INFO     | update_server=False
[2025-10-12 17:03:02] 2025-10-12 19:52:04,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:03:02] 2025-10-12 19:52:04,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:03:02] 2025-10-12 19:52:04,203 | INFO     | all job control threads have been joined
[2025-10-12 17:03:02] 2025-10-12 19:52:04,962 | INFO     | all data control threads have been joined
[2025-10-12 17:03:02] 2025-10-12 19:52:05,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:03:02] 2025-10-12 19:52:05,038 | INFO     | aborting loop
[2025-10-12 17:03:02] 2025-10-12 19:52:05,197 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:05,210 | INFO     | [job] control thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:05,263 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:05,490 | INFO     | all payload control threads have been joined
[2025-10-12 17:03:02] 2025-10-12 19:52:05,570 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:05,806 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:05,897 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:05,967 | INFO     | [data] control thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:06,059 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:06,075 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:06,196 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:06,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:03:02] 2025-10-12 19:52:06,470 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:06,496 | INFO     | [payload] control thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:06,621 | INFO     | [job] validate thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:06,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:03:02] 2025-10-12 19:52:07,312 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:10,695 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:14,955 | INFO     | job.realtimelogging is not enabled
[2025-10-12 17:03:02] 2025-10-12 19:52:15,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:03:02] 2025-10-12 19:52:30,734 [wrapper] supervise_pilot (15 min periods counter: 9)
[2025-10-12 17:03:02] 2025-10-12 19:52:34,308 | INFO     | PID=615506 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:03:02] 2025-10-12 19:52:34,308 | INFO     | .. there are 21 such processes running
[2025-10-12 17:03:02] 2025-10-12 19:52:34,309 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:03:02] 2025-10-12 19:52:34,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:03:02] 2025-10-12 19:52:34,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:03:02] 2025-10-12 19:52:46,626 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:03:02] 2025-10-12 19:52:47,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549921806144)>', '<ExcThread(monitor, started 140549298312960)>']
[2025-10-12 17:03:02] 2025-10-12 19:52:47,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:03:02] 2025-10-12 19:52:47,413 | INFO     | [monitor] control thread has ended
[2025-10-12 17:03:02] 2025-10-12 19:52:52,114 | INFO     | all workflow threads have been joined
[2025-10-12 17:03:02] 2025-10-12 19:52:52,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:03:02] 2025-10-12 19:52:52,114 | INFO     | traces error code: 0
[2025-10-12 17:03:02] 2025-10-12 19:52:52,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:03:02] 2025-10-12 19:52:52,297 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:03:02] 2025-10-12 19:52:52,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:03:02] 2025-10-12 19:52:52,375 [wrapper] pilotpid: 615506
[2025-10-12 17:03:02] 2025-10-12 19:52:52,421 [wrapper] Pilot exit status: 0
[2025-10-12 17:03:02] 2025-10-12 19:52:52,607 [wrapper] pandaids: 6840225538
[2025-10-12 17:03:02] 2025-10-12 19:52:53,658 [wrapper] cleanup supervisor_pilot 1051252 615507
[2025-10-12 17:03:02] 2025-10-12 19:52:53,710 [wrapper] Test setup, not cleaning
[2025-10-12 17:03:02] 2025-10-12 19:52:53,781 [wrapper] apfmon messages muted
[2025-10-12 17:03:02] 2025-10-12 19:52:53,829 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:03:02] 2025-10-12 19:52:53,858 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:03:02]  *** Error codes and diagnostics ***
[2025-10-12 17:03:02]     "exeErrorCode": 0,
[2025-10-12 17:03:02]     "exeErrorDiag": "",
[2025-10-12 17:03:02]     "pilotErrorCode": 0,
[2025-10-12 17:03:02]     "pilotErrorDiag": "",
[2025-10-12 17:03:02]  *** Listing of results directory ***
[2025-10-12 17:03:02] total 417400
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:44 queuedata.json
[2025-10-12 17:03:02] -rwx------. 1 boincer umatlas     36292 Oct 12 11:44 runpilot2-wrapper.sh
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:03:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:51 run_atlas
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:51 job.xml
[2025-10-12 17:03:02] -rw-r--r--. 2 boincer umatlas 222329281 Oct 12 13:51 EVNT.46676267._004586.pool.root.1
[2025-10-12 17:03:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:51 shared
[2025-10-12 17:03:02] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 13:51 input.tar.gz
[2025-10-12 17:03:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:51 start_atlas.sh
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:51 boinc_lockfile
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 13:51 pandaJob.out
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas    975528 Oct 12 13:52 agis_schedconf.cvmfs.json
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:03:02] drwx------. 5 boincer umatlas      4096 Oct 12 13:52 pilot3
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas 198396882 Oct 12 15:51 HITS.46676269._082605.pool.root.1
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas       530 Oct 12 15:51 boinc_task_state.xml
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas      1046 Oct 12 15:51 memory_monitor_summary.json
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas        95 Oct 12 15:51 pilot_heartbeat.json
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas    412118 Oct 12 15:51 log.46676269._082605.job.log.tgz.1
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas      7778 Oct 12 15:52 heartbeat.json
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas      4895 Oct 12 15:52 pilotlog.txt
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas    981159 Oct 12 15:52 log.46676269._082605.job.log.1
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas       357 Oct 12 15:52 output.list
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:52 runtime_log
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas   1413120 Oct 12 15:52 result.tar.gz
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 15:52 runtime_log.err
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas       653 Oct 12 15:52 6fMMDmUQDS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoKUMDmzaGhPn.diag
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas      6898 Oct 12 17:03 init_data.xml
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:03 boinc_mmap_file
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas        27 Oct 12 17:03 wrapper_checkpoint.txt
[2025-10-12 17:03:02] -rw-r--r--. 1 boincer umatlas     21006 Oct 12 17:03 stderr.txt
[2025-10-12 17:03:02] HITS file was successfully produced:
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas 198396882 Oct 12 15:51 shared/HITS.pool.root.1
[2025-10-12 17:03:02]  *** Contents of shared directory: ***
[2025-10-12 17:03:02] total 412832
[2025-10-12 17:03:02] -rw-r--r--. 2 boincer umatlas 222329281 Oct 12 13:51 ATLAS.root_0
[2025-10-12 17:03:02] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 13:51 input.tar.gz
[2025-10-12 17:03:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:51 start_atlas.sh
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas 198396882 Oct 12 15:51 HITS.pool.root.1
[2025-10-12 17:03:02] -rw-------. 1 boincer umatlas   1413120 Oct 12 15:52 result.tar.gz
17:03:04 (609522): run_atlas exited; CPU time 34122.122514
17:03:04 (609522): called boinc_finish(0)

</stderr_txt>
]]>

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