Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:45:21 (1126985): wrapper (7.7.26015): starting
13:45:21 (1126985): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:45:21] Arguments: --nthreads 8
[2025-10-12 13:45:21] Threads: 8
[2025-10-12 13:45:21] Checking for CVMFS
[2025-10-12 13:45:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:45:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:45:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:45:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:45:24] 2.13.2.0 5414 5994 150716 151629 1 407 21907855 40960001 12927 16776704 0 9360743 99.742 4450089 37030 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:45:24] CVMFS is ok
[2025-10-12 13:45:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:45:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:45:24] Further information can be found at the LHC@home message board.
[2025-10-12 13:45:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:45:24] Checking for apptainer binary...
[2025-10-12 13:45:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:45:24] Running /usr/bin/apptainer --version
[2025-10-12 13:45:28] apptainer version 1.4.3-1.el9
[2025-10-12 13:45:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:45:29] c-210-33-3.aglt2.org
[2025-10-12 13:45:29] apptainer works
[2025-10-12 13:45:30] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:45:30] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:45:30] Starting ATLAS job with PandaID=6840225513
[2025-10-12 13:45:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:48:57]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:48:58] 2025-10-12 20:48:23,277 | INFO     | time since job start (10872s) is within the limit (172800.0s)
[2025-10-12 16:48:58] 2025-10-12 20:48:23,849 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 16:48:58] 2025-10-12 20:48:23,859 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2577.041035714286
[2025-10-12 16:48:58] 2025-10-12 20:48:23,869 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840225513/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:48:58] 2025-10-12 20:48:23,870 | INFO     | extracted standard info from prmon json
[2025-10-12 16:48:58] 2025-10-12 20:48:23,870 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:48:58] 2025-10-12 20:48:23,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:48:58] 2025-10-12 20:48:23,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:48:58] 2025-10-12 20:48:23,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:48:58] 2025-10-12 20:48:23,874 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:48:58] 2025-10-12 20:48:23,875 | INFO     | sum of square deviations: 1690514108.4943168
[2025-10-12 16:48:58] 2025-10-12 20:48:23,876 | INFO     | sum of deviations: 45224519423.15341
[2025-10-12 16:48:58] 2025-10-12 20:48:23,876 | INFO     | mean x: 1760296737.8806818
[2025-10-12 16:48:58] 2025-10-12 20:48:23,876 | INFO     | mean y: 2448601.721590909
[2025-10-12 16:48:58] 2025-10-12 20:48:23,876 | INFO     | -- intersect: -47088891016.675995
[2025-10-12 16:48:58] 2025-10-12 20:48:23,876 | INFO     | intersect: -47088891016.675995
[2025-10-12 16:48:58] 2025-10-12 20:48:23,876 | INFO     | chi2: 3.381433176978743
[2025-10-12 16:48:58] 2025-10-12 20:48:23,877 | INFO     | sum of square deviations: 1550481470.0467782
[2025-10-12 16:48:58] 2025-10-12 20:48:23,877 | INFO     | sum of deviations: 54660843156.90056
[2025-10-12 16:48:58] 2025-10-12 20:48:23,878 | INFO     | mean x: 1760296585.374269
[2025-10-12 16:48:58] 2025-10-12 20:48:23,878 | INFO     | mean y: 2458603.2046783627
[2025-10-12 16:48:58] 2025-10-12 20:48:23,878 | INFO     | -- intersect: -62055229554.69867
[2025-10-12 16:48:58] 2025-10-12 20:48:23,878 | INFO     | intersect: -62055229554.69867
[2025-10-12 16:48:58] 2025-10-12 20:48:23,878 | INFO     | chi2: 2.7081982200448405
[2025-10-12 16:48:58] 2025-10-12 20:48:23,878 | INFO     | current chi2=2.7081982200448405 (change=19.909751921681547 %)
[2025-10-12 16:48:58] 2025-10-12 20:48:23,878 | INFO     | right removable region: 170
[2025-10-12 16:48:58] 2025-10-12 20:48:23,879 | INFO     | sum of square deviations: 1550472442.7485342
[2025-10-12 16:48:58] 2025-10-12 20:48:23,879 | INFO     | sum of deviations: 1351650561.7836246
[2025-10-12 16:48:58] 2025-10-12 20:48:23,880 | INFO     | mean x: 1760296890.3918128
[2025-10-12 16:48:58] 2025-10-12 20:48:23,880 | INFO     | mean y: 2496126.9883040935
[2025-10-12 16:48:58] 2025-10-12 20:48:23,880 | INFO     | -- intersect: -1532072443.986261
[2025-10-12 16:48:58] 2025-10-12 20:48:23,880 | INFO     | intersect: -1532072443.986261
[2025-10-12 16:48:58] 2025-10-12 20:48:23,880 | INFO     | chi2: 0.8076808876638969
[2025-10-12 16:48:58] 2025-10-12 20:48:23,880 | INFO     | current chi2=0.8076808876638969 (change=76.11424371291149 %)
[2025-10-12 16:48:58] 2025-10-12 20:48:23,881 | INFO     | sum of square deviations: 1418384414.457839
[2025-10-12 16:48:58] 2025-10-12 20:48:23,881 | INFO     | sum of deviations: -5657121499.156628
[2025-10-12 16:48:58] 2025-10-12 20:48:23,881 | INFO     | mean x: 1760297042.9036145
[2025-10-12 16:48:58] 2025-10-12 20:48:23,882 | INFO     | mean y: 2504145.4277108433
[2025-10-12 16:48:58] 2025-10-12 20:48:23,882 | INFO     | -- intersect: 7023318915.25038
[2025-10-12 16:48:58] 2025-10-12 20:48:23,882 | INFO     | intersect: 7023318915.25038
[2025-10-12 16:48:58] 2025-10-12 20:48:23,882 | INFO     | chi2: 0.7348118515115455
[2025-10-12 16:48:58] 2025-10-12 20:48:23,882 | INFO     | current chi2=0.7348118515115455 (change=9.02200822940293 %)
[2025-10-12 16:48:58] 2025-10-12 20:48:23,882 | INFO     | left removable region: 20
[2025-10-12 16:48:58] 2025-10-12 20:48:23,882 | INFO     | sum of square deviations: 1046492170.2933359
[2025-10-12 16:48:58] 2025-10-12 20:48:23,883 | INFO     | sum of deviations: 5222554452.826667
[2025-10-12 16:48:58] 2025-10-12 20:48:23,883 | INFO     | mean x: 1760297164.8933334
[2025-10-12 16:48:58] 2025-10-12 20:48:23,883 | INFO     | mean y: 2515489.4266666668
[2025-10-12 16:48:58] 2025-10-12 20:48:23,883 | INFO     | -- intersect: -8782306851.131248
[2025-10-12 16:48:58] 2025-10-12 20:48:23,884 | INFO     | intersect: -8782306851.131248
[2025-10-12 16:48:58] 2025-10-12 20:48:23,884 | INFO     | chi2: 0.0034373524334559524
[2025-10-12 16:48:58] 2025-10-12 20:48:23,884 | INFO     | -- intersect: -8782306851.131248
[2025-10-12 16:48:58] 2025-10-12 20:48:23,884 | INFO     | current memory leak: 4.99 B/s (using 150 data points, chi2=0.00)
[2025-10-12 16:48:58] 2025-10-12 20:48:23,884 | INFO     | could have reported an average CPU frequency of 2545 MHz (9 samples)
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | ..............................
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | . Timing measurements:
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | . get job = 0 s
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | . initial setup = 9 s
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | . payload setup = 49 s
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | . stage-in = 0 s
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | . payload execution = 10718 s
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | . stage-out = 2 s
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | . log creation = 0 s
[2025-10-12 16:48:58] 2025-10-12 20:48:23,885 | INFO     | ..............................
[2025-10-12 16:48:58] 2025-10-12 20:48:24,045 | INFO     | 
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | job summary report
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | --------------------------------------------------
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | PanDA job id: 6840225513
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | task id: 46676269
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | errors: (none)
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | pilot state: finished 
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | transexitcode: 0
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | exeerrorcode: 0
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | exeerrordiag: 
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | exitcode: 0
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | exitmsg: OK
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | cpuconsumptiontime: 43503 s
[2025-10-12 16:48:58] 2025-10-12 20:48:24,046 | INFO     | nevents: 400
[2025-10-12 16:48:58] 2025-10-12 20:48:24,047 | INFO     | neventsw: 0
[2025-10-12 16:48:58] 2025-10-12 20:48:24,047 | INFO     | pid: 1140056
[2025-10-12 16:48:58] 2025-10-12 20:48:24,047 | INFO     | pgrp: 1140056
[2025-10-12 16:48:58] 2025-10-12 20:48:24,047 | INFO     | corecount: 8
[2025-10-12 16:48:58] 2025-10-12 20:48:24,047 | INFO     | event service: False
[2025-10-12 16:48:58] 2025-10-12 20:48:24,047 | INFO     | sizes: {0: 2348857, 1: 2348857, 12: 2348885, 23: 2348913, 34: 2348941, 36: 2349231, 45: 2349387, 10772: 2378531, 10777: 2387529, 10779: 2387585, 10793: 2387843}
[2025-10-12 16:48:58] 2025-10-12 20:48:24,047 | INFO     | --------------------------------------------------
[2025-10-12 16:48:58] 2025-10-12 20:48:24,047 | INFO     | 
[2025-10-12 16:48:58] 2025-10-12 20:48:24,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 16:48:58] 2025-10-12 20:48:24,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,075 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:48:58] 2025-10-12 20:48:24,076 | INFO     | job 6840225513 has completed (purged errors)
[2025-10-12 16:48:58] 2025-10-12 20:48:24,076 | INFO     | overall cleanup function is called
[2025-10-12 16:48:58] 2025-10-12 20:48:24,948 | INFO     | PID=1133264 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 16:48:58] 2025-10-12 20:48:24,949 | INFO     | .. there are 10 such processes running
[2025-10-12 16:48:58] 2025-10-12 20:48:25,084 | INFO     | --- collectZombieJob: --- 10, [1140056]
[2025-10-12 16:48:58] 2025-10-12 20:48:25,085 | INFO     | zombie collector waiting for pid 1140056
[2025-10-12 16:48:58] 2025-10-12 20:48:25,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:48:58] 2025-10-12 20:48:25,085 | INFO     | collected zombie processes
[2025-10-12 16:48:58] 2025-10-12 20:48:25,085 | INFO     | will attempt to kill all subprocesses of pid=1140056
[2025-10-12 16:48:58] 2025-10-12 20:48:25,377 | INFO     | process IDs to be killed: [1140056] (in reverse order)
[2025-10-12 16:48:58] 2025-10-12 20:48:25,547 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:48:58] 2025-10-12 20:48:25,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:48:58] 2025-10-12 20:48:25,559 | INFO     | did not find any defunct processes belonging to 1140056
[2025-10-12 16:48:58] 2025-10-12 20:48:25,569 | INFO     | did not find any defunct processes belonging to 1140056
[2025-10-12 16:48:58] 2025-10-12 20:48:25,569 | INFO     | ready for new job
[2025-10-12 16:48:58] 2025-10-12 20:48:25,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:48:58] 2025-10-12 20:48:25,572 | INFO     | ***************************************
[2025-10-12 16:48:58] 2025-10-12 20:48:25,572 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:48:58] 2025-10-12 20:48:25,572 | INFO     | ***************************************
[2025-10-12 16:48:58] 2025-10-12 20:48:25,572 | INFO     | 
[2025-10-12 16:48:58] 2025-10-12 20:48:25,576 | INFO     | architecture information:
[2025-10-12 16:48:58] 2025-10-12 20:48:25,576 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:48:58] 2025-10-12 20:48:25,614 | INFO     | cat /etc/os-release:
[2025-10-12 16:48:58] NAME="CentOS Linux"
[2025-10-12 16:48:58] VERSION="7 (Core)"
[2025-10-12 16:48:58] ID="centos"
[2025-10-12 16:48:58] ID_LIKE="rhel fedora"
[2025-10-12 16:48:58] VERSION_ID="7"
[2025-10-12 16:48:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:48:58] ANSI_COLOR="0;31"
[2025-10-12 16:48:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:48:58] HOME_URL="https://www.centos.org/"
[2025-10-12 16:48:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:48:58] 
[2025-10-12 16:48:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:48:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:48:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:48:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:48:58] 
[2025-10-12 16:48:58] 2025-10-12 20:48:25,614 | INFO     | ***************************************
[2025-10-12 16:48:58] 2025-10-12 20:48:26,118 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 16:48:58] 2025-10-12 20:48:26,227 | INFO     | sufficient remaining disk space (74553753600 B)
[2025-10-12 16:48:58] 2025-10-12 20:48:26,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:48:58] 2025-10-12 20:48:26,227 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:48:58] 2025-10-12 20:48:26,227 | INFO     | update_server=False
[2025-10-12 16:48:58] 2025-10-12 20:48:26,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:48:58] 2025-10-12 20:48:26,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:48:58] 2025-10-12 20:48:26,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:48:58] 2025-10-12 20:48:26,230 | INFO     | aborting loop
[2025-10-12 16:48:58] 2025-10-12 20:48:26,967 | INFO     | all data control threads have been joined
[2025-10-12 16:48:58] 2025-10-12 20:48:27,207 | INFO     | all job control threads have been joined
[2025-10-12 16:48:58] 2025-10-12 20:48:27,235 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:27,251 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:27,262 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:27,436 | INFO     | all payload control threads have been joined
[2025-10-12 16:48:58] 2025-10-12 20:48:27,528 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:27,558 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:27,604 | INFO     | [job] validate thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:27,862 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:27,974 | INFO     | [data] control thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:28,180 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:28,212 | INFO     | [job] control thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:28,247 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:28,442 | INFO     | [payload] control thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:28,775 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:28,776 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:29,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:48:58] 2025-10-12 20:48:29,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:48:58] 2025-10-12 20:48:30,065 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:30,206 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:48:58] 2025-10-12 20:48:33,572 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:48:58] 2025-10-12 20:48:35,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664937523008)>', '<ExcThread(monitor, started 139664568588032)>']
[2025-10-12 16:48:58] 2025-10-12 20:48:40,162 | INFO     | all workflow threads have been joined
[2025-10-12 16:48:58] 2025-10-12 20:48:40,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:48:58] 2025-10-12 20:48:40,163 | INFO     | traces error code: 0
[2025-10-12 16:48:58] 2025-10-12 20:48:40,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:48:58] 2025-10-12 20:48:57,539 | INFO     | PID=1133264 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:48:58] 2025-10-12 20:48:57,540 | INFO     | .. there are 10 such processes running
[2025-10-12 16:48:58] 2025-10-12 20:48:57,540 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:48:58] 2025-10-12 20:48:57,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:48:58] 2025-10-12 20:48:57,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:48:58] 2025-10-12 20:48:57,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:48:58] 2025-10-12 20:48:57,540 | INFO     | [monitor] control thread has ended
[2025-10-12 16:48:58] 2025-10-12 20:48:57,730 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:48:58] 2025-10-12 20:48:57,733 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:48:58] 2025-10-12 20:48:57,737 [wrapper] pilotpid: 1133264
[2025-10-12 16:48:58] 2025-10-12 20:48:57,743 [wrapper] Pilot exit status: 0
[2025-10-12 16:48:58] 2025-10-12 20:48:57,777 [wrapper] pandaids: 6840225513
[2025-10-12 16:48:58] 2025-10-12 20:48:57,837 [wrapper] cleanup supervisor_pilot 1343778 1133265
[2025-10-12 16:48:58] 2025-10-12 20:48:57,844 [wrapper] Test setup, not cleaning
[2025-10-12 16:48:58] 2025-10-12 20:48:57,849 [wrapper] apfmon messages muted
[2025-10-12 16:48:58] 2025-10-12 20:48:57,855 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:48:58] 2025-10-12 20:48:57,861 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:48:58]  *** Error codes and diagnostics ***
[2025-10-12 16:48:58]     "exeErrorCode": 0,
[2025-10-12 16:48:58]     "exeErrorDiag": "",
[2025-10-12 16:48:58]     "pilotErrorCode": 0,
[2025-10-12 16:48:58]     "pilotErrorDiag": "",
[2025-10-12 16:48:58]  *** Listing of results directory ***
[2025-10-12 16:48:58] total 403860
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:42 queuedata.json
[2025-10-12 16:48:58] -rwx------. 1 boincer umatlas     36292 Oct 12 11:43 runpilot2-wrapper.sh
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:48:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:45 run_atlas
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:45 job.xml
[2025-10-12 16:48:58] -rw-r--r--. 2 boincer umatlas 221373884 Oct 12 13:45 EVNT.46676267._004585.pool.root.1
[2025-10-12 16:48:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:45 start_atlas.sh
[2025-10-12 16:48:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:45 shared
[2025-10-12 16:48:58] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 13:45 input.tar.gz
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:45 boinc_lockfile
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 13:45 pandaJob.out
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas    975528 Oct 12 13:47 agis_schedconf.cvmfs.json
[2025-10-12 16:48:58] drwx------. 5 boincer umatlas      4096 Oct 12 13:47 pilot3
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas 184524482 Oct 12 16:47 HITS.46676269._082580.pool.root.1
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas       531 Oct 12 16:47 boinc_task_state.xml
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 16:47 init_data.xml
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas      1041 Oct 12 16:47 memory_monitor_summary.json
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas    415880 Oct 12 16:48 log.46676269._082580.job.log.tgz.1
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas        95 Oct 12 16:48 pilot_heartbeat.json
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas      7826 Oct 12 16:48 heartbeat.json
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:48 boinc_mmap_file
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:48 wrapper_checkpoint.txt
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas       823 Oct 12 16:48 pilotlog.txt
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas   1460524 Oct 12 16:48 log.46676269._082580.job.log.1
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas       357 Oct 12 16:48 output.list
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:48 runtime_log
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas   1894400 Oct 12 16:48 result.tar.gz
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas       657 Oct 12 16:48 UmIODmVPDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBUkNDmAp9Qbm.diag
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 16:48 runtime_log.err
[2025-10-12 16:48:58] -rw-r--r--. 1 boincer umatlas     21310 Oct 12 16:48 stderr.txt
[2025-10-12 16:48:58] HITS file was successfully produced:
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas 184524482 Oct 12 16:47 shared/HITS.pool.root.1
[2025-10-12 16:48:58]  *** Contents of shared directory: ***
[2025-10-12 16:48:58] total 398824
[2025-10-12 16:48:58] -rw-r--r--. 2 boincer umatlas 221373884 Oct 12 13:45 ATLAS.root_0
[2025-10-12 16:48:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:45 start_atlas.sh
[2025-10-12 16:48:58] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 13:45 input.tar.gz
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas 184524482 Oct 12 16:47 HITS.pool.root.1
[2025-10-12 16:48:58] -rw-------. 1 boincer umatlas   1894400 Oct 12 16:48 result.tar.gz
16:48:59 (1126985): run_atlas exited; CPU time 43751.383380
16:48:59 (1126985): called boinc_finish(0)

</stderr_txt>
]]>

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