Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:13:32 (3385530): wrapper (7.7.26015): starting
14:13:32 (3385530): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 14:13:32] Arguments: --nthreads 9
[2025-10-12 14:13:32] Threads: 9
[2025-10-12 14:13:32] Checking for CVMFS
[2025-10-12 14:13:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:13:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:13:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:13:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:13:33] 2.13.2.0 24018 129607 458976 151631 0 251 27298053 32935937 44631 16776704 0 488150084 99.696 398500683 17493 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 14:13:33] CVMFS is ok
[2025-10-12 14:13:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:13:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:13:33] Further information can be found at the LHC@home message board.
[2025-10-12 14:13:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:13:33] Checking for apptainer binary...
[2025-10-12 14:13:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:13:33] Running /usr/bin/apptainer --version
[2025-10-12 14:13:33] apptainer version 1.4.3-1.el9
[2025-10-12 14:13:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:13:34] c7-2-16.aglt2.org
[2025-10-12 14:13:34] apptainer works
[2025-10-12 14:13:34] Set ATHENA_PROC_NUMBER=9
[2025-10-12 14:13:34] Set ATHENA_CORE_NUMBER=9
[2025-10-12 14:13:34] Starting ATLAS job with PandaID=6840082221
[2025-10-12 14:13:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:35:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:35:49] 2025-10-12 23:34:49,768 | INFO     | time since job start (19241s) is within the limit (172800.0s)
[2025-10-12 19:35:49] 2025-10-12 23:34:50,181 | INFO     | monitor loop #1212: job 0:6840082221 is in state 'finished'
[2025-10-12 19:35:49] 2025-10-12 23:34:50,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,183 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 19:35:49] 2025-10-12 23:34:51,197 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3243.587885416668
[2025-10-12 19:35:49] 2025-10-12 23:34:51,221 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840082221/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,222 | INFO     | extracted standard info from prmon json
[2025-10-12 19:35:49] 2025-10-12 23:34:51,222 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:35:49] 2025-10-12 23:34:51,222 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:35:49] 2025-10-12 23:34:51,222 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:35:49] 2025-10-12 23:34:51,222 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:35:49] 2025-10-12 23:34:51,246 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:35:49] 2025-10-12 23:34:51,247 | INFO     | sum of square deviations: 9599753432.585936
[2025-10-12 19:35:49] 2025-10-12 23:34:51,275 | INFO     | sum of deviations: 43468214341.97451
[2025-10-12 19:35:49] 2025-10-12 23:34:51,276 | INFO     | mean x: 1760302465.7388535
[2025-10-12 19:35:49] 2025-10-12 23:34:51,276 | INFO     | mean y: 2389850.7070063693
[2025-10-12 19:35:49] 2025-10-12 23:34:51,276 | INFO     | -- intersect: -7968357046.57355
[2025-10-12 19:35:49] 2025-10-12 23:34:51,276 | INFO     | intersect: -7968357046.57355
[2025-10-12 19:35:49] 2025-10-12 23:34:51,276 | INFO     | chi2: 3.1961653290291814
[2025-10-12 19:35:49] 2025-10-12 23:34:51,277 | INFO     | sum of square deviations: 9148446914.796068
[2025-10-12 19:35:49] 2025-10-12 23:34:51,279 | INFO     | sum of deviations: 62257232702.281555
[2025-10-12 19:35:49] 2025-10-12 23:34:51,307 | INFO     | mean x: 1760302313.2427185
[2025-10-12 19:35:49] 2025-10-12 23:34:51,307 | INFO     | mean y: 2396117.9029126214
[2025-10-12 19:35:49] 2025-10-12 23:34:51,308 | INFO     | -- intersect: -11976855853.781004
[2025-10-12 19:35:49] 2025-10-12 23:34:51,308 | INFO     | intersect: -11976855853.781004
[2025-10-12 19:35:49] 2025-10-12 23:34:51,308 | INFO     | chi2: 2.510279821840309
[2025-10-12 19:35:49] 2025-10-12 23:34:51,312 | INFO     | current chi2=2.510279821840309 (change=21.459637927966845 %)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,312 | INFO     | right removable region: 308
[2025-10-12 19:35:49] 2025-10-12 23:34:51,313 | INFO     | sum of square deviations: 9148401164.796074
[2025-10-12 19:35:49] 2025-10-12 23:34:51,315 | INFO     | sum of deviations: -22874270946.737873
[2025-10-12 19:35:49] 2025-10-12 23:34:51,315 | INFO     | mean x: 1760302618.2427185
[2025-10-12 19:35:49] 2025-10-12 23:34:51,315 | INFO     | mean y: 2412175.1165048545
[2025-10-12 19:35:49] 2025-10-12 23:34:51,315 | INFO     | -- intersect: 4403797544.276098
[2025-10-12 19:35:49] 2025-10-12 23:34:51,315 | INFO     | intersect: 4403797544.276098
[2025-10-12 19:35:49] 2025-10-12 23:34:51,316 | INFO     | chi2: 1.089017498824207
[2025-10-12 19:35:49] 2025-10-12 23:34:51,316 | INFO     | current chi2=1.089017498824207 (change=65.92737275092743 %)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,316 | INFO     | sum of square deviations: 8711421259.49667
[2025-10-12 19:35:49] 2025-10-12 23:34:51,376 | INFO     | sum of deviations: -38397721926.108574
[2025-10-12 19:35:49] 2025-10-12 23:34:51,376 | INFO     | mean x: 1760302770.7467105
[2025-10-12 19:35:49] 2025-10-12 23:34:51,376 | INFO     | mean y: 2417584.1414473685
[2025-10-12 19:35:49] 2025-10-12 23:34:51,377 | INFO     | -- intersect: 7761383002.465846
[2025-10-12 19:35:49] 2025-10-12 23:34:51,377 | INFO     | intersect: 7761383002.465846
[2025-10-12 19:35:49] 2025-10-12 23:34:51,377 | INFO     | chi2: 0.9767314202708397
[2025-10-12 19:35:49] 2025-10-12 23:34:51,377 | INFO     | current chi2=0.9767314202708397 (change=10.31076898898324 %)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,377 | INFO     | left removable region: 20
[2025-10-12 19:35:49] 2025-10-12 23:34:51,377 | INFO     | sum of square deviations: 7407013850.468759
[2025-10-12 19:35:49] 2025-10-12 23:34:51,407 | INFO     | sum of deviations: -10859899729.333328
[2025-10-12 19:35:49] 2025-10-12 23:34:51,407 | INFO     | mean x: 1760302892.7604167
[2025-10-12 19:35:49] 2025-10-12 23:34:51,407 | INFO     | mean y: 2421420.111111111
[2025-10-12 19:35:49] 2025-10-12 23:34:51,407 | INFO     | -- intersect: 2583314786.1230717
[2025-10-12 19:35:49] 2025-10-12 23:34:51,407 | INFO     | intersect: 2583314786.1230717
[2025-10-12 19:35:49] 2025-10-12 23:34:51,407 | INFO     | chi2: 0.20984324366422394
[2025-10-12 19:35:49] 2025-10-12 23:34:51,408 | INFO     | -- intersect: 2583314786.1230717
[2025-10-12 19:35:49] 2025-10-12 23:34:51,408 | INFO     | current memory leak: -1.47 B/s (using 288 data points, chi2=0.21)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,412 | INFO     | could have reported an average CPU frequency of 3193 MHz (14 samples)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,412 | INFO     | ..............................
[2025-10-12 19:35:49] 2025-10-12 23:34:51,412 | INFO     | . Timing measurements:
[2025-10-12 19:35:49] 2025-10-12 23:34:51,413 | INFO     | . get job = 0 s
[2025-10-12 19:35:49] 2025-10-12 23:34:51,413 | INFO     | . initial setup = 4 s
[2025-10-12 19:35:49] 2025-10-12 23:34:51,413 | INFO     | . payload setup = 18 s
[2025-10-12 19:35:49] 2025-10-12 23:34:51,413 | INFO     | . stage-in = 0 s
[2025-10-12 19:35:49] 2025-10-12 23:34:51,413 | INFO     | . payload execution = 19161 s
[2025-10-12 19:35:49] 2025-10-12 23:34:51,413 | INFO     | . stage-out = 5 s
[2025-10-12 19:35:49] 2025-10-12 23:34:51,413 | INFO     | . log creation = 0 s
[2025-10-12 19:35:49] 2025-10-12 23:34:51,413 | INFO     | ..............................
[2025-10-12 19:35:49] 2025-10-12 23:34:51,633 | INFO     | 
[2025-10-12 19:35:49] 2025-10-12 23:34:51,633 | INFO     | job summary report
[2025-10-12 19:35:49] 2025-10-12 23:34:51,633 | INFO     | --------------------------------------------------
[2025-10-12 19:35:49] 2025-10-12 23:34:51,633 | INFO     | PanDA job id: 6840082221
[2025-10-12 19:35:49] 2025-10-12 23:34:51,633 | INFO     | task id: 46676269
[2025-10-12 19:35:49] 2025-10-12 23:34:51,634 | INFO     | errors: (none)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:35:49] 2025-10-12 23:34:51,634 | INFO     | pilot state: finished 
[2025-10-12 19:35:49] 2025-10-12 23:34:51,634 | INFO     | transexitcode: 0
[2025-10-12 19:35:49] 2025-10-12 23:34:51,634 | INFO     | exeerrorcode: 0
[2025-10-12 19:35:49] 2025-10-12 23:34:51,634 | INFO     | exeerrordiag: 
[2025-10-12 19:35:49] 2025-10-12 23:34:51,634 | INFO     | exitcode: 0
[2025-10-12 19:35:49] 2025-10-12 23:34:51,634 | INFO     | exitmsg: OK
[2025-10-12 19:35:49] 2025-10-12 23:34:51,637 | INFO     | cpuconsumptiontime: 33865 s
[2025-10-12 19:35:49] 2025-10-12 23:34:51,637 | INFO     | nevents: 400
[2025-10-12 19:35:49] 2025-10-12 23:34:51,637 | INFO     | neventsw: 0
[2025-10-12 19:35:49] 2025-10-12 23:34:51,637 | INFO     | pid: 3435104
[2025-10-12 19:35:49] 2025-10-12 23:34:51,637 | INFO     | pgrp: 3435104
[2025-10-12 19:35:49] 2025-10-12 23:34:51,641 | INFO     | corecount: 9
[2025-10-12 19:35:49] 2025-10-12 23:34:51,641 | INFO     | event service: False
[2025-10-12 19:35:49] 2025-10-12 23:34:51,641 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348913, 13: 2348913, 16: 2349231, 23: 2349259, 19184: 2382567, 19185: 2382566, 19191: 2391620, 19193: 2391676, 19206: 2391870}
[2025-10-12 19:35:49] 2025-10-12 23:34:51,641 | INFO     | --------------------------------------------------
[2025-10-12 19:35:49] 2025-10-12 23:34:51,641 | INFO     | 
[2025-10-12 19:35:49] 2025-10-12 23:34:51,642 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,756 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,757 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,757 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,764 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:35:49] 2025-10-12 23:34:51,764 | INFO     | job 6840082221 has completed (purged errors)
[2025-10-12 19:35:49] 2025-10-12 23:34:51,764 | INFO     | overall cleanup function is called
[2025-10-12 19:35:49] 2025-10-12 23:34:52,773 | INFO     | --- collectZombieJob: --- 10, [3435104]
[2025-10-12 19:35:49] 2025-10-12 23:34:52,773 | INFO     | zombie collector waiting for pid 3435104
[2025-10-12 19:35:49] 2025-10-12 23:34:52,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:35:49] 2025-10-12 23:34:52,774 | INFO     | collected zombie processes
[2025-10-12 19:35:49] 2025-10-12 23:34:52,774 | INFO     | will attempt to kill all subprocesses of pid=3435104
[2025-10-12 19:35:49] 2025-10-12 23:34:54,821 | INFO     | process IDs to be killed: [3435104] (in reverse order)
[2025-10-12 19:35:49] 2025-10-12 23:34:55,249 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:35:49] 2025-10-12 23:34:55,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:35:49] 2025-10-12 23:34:55,293 | INFO     | did not find any defunct processes belonging to 3435104
[2025-10-12 19:35:49] 2025-10-12 23:34:55,335 | INFO     | did not find any defunct processes belonging to 3435104
[2025-10-12 19:35:49] 2025-10-12 23:34:55,336 | INFO     | ready for new job
[2025-10-12 19:35:49] 2025-10-12 23:34:55,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:35:49] 2025-10-12 23:34:55,342 | INFO     | ***************************************
[2025-10-12 19:35:49] 2025-10-12 23:34:55,342 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:35:49] 2025-10-12 23:34:55,342 | INFO     | ***************************************
[2025-10-12 19:35:49] 2025-10-12 23:34:55,342 | INFO     | 
[2025-10-12 19:35:49] 2025-10-12 23:34:55,348 | INFO     | architecture information:
[2025-10-12 19:35:49] 2025-10-12 23:34:55,348 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:35:49] 2025-10-12 23:34:55,370 | INFO     | cat /etc/os-release:
[2025-10-12 19:35:49] NAME="CentOS Linux"
[2025-10-12 19:35:49] VERSION="7 (Core)"
[2025-10-12 19:35:49] ID="centos"
[2025-10-12 19:35:49] ID_LIKE="rhel fedora"
[2025-10-12 19:35:49] VERSION_ID="7"
[2025-10-12 19:35:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:35:49] ANSI_COLOR="0;31"
[2025-10-12 19:35:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:35:49] HOME_URL="https://www.centos.org/"
[2025-10-12 19:35:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:35:49] 
[2025-10-12 19:35:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:35:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:35:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:35:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:35:49] 
[2025-10-12 19:35:49] 2025-10-12 23:34:55,371 | INFO     | ***************************************
[2025-10-12 19:35:49] 2025-10-12 23:34:55,879 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 19:35:49] 2025-10-12 23:34:55,926 | INFO     | sufficient remaining disk space (73950822400 B)
[2025-10-12 19:35:49] 2025-10-12 23:34:55,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:35:49] 2025-10-12 23:34:55,926 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:35:49] 2025-10-12 23:34:55,927 | INFO     | update_server=False
[2025-10-12 19:35:49] 2025-10-12 23:34:55,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:35:49] 2025-10-12 23:34:55,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:35:49] 2025-10-12 23:34:56,179 | INFO     | all data control threads have been joined
[2025-10-12 19:35:49] 2025-10-12 23:34:56,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:35:49] 2025-10-12 23:34:56,236 | INFO     | aborting loop
[2025-10-12 19:35:49] 2025-10-12 23:34:56,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:35:49] 2025-10-12 23:34:56,806 | INFO     | all job control threads have been joined
[2025-10-12 19:35:49] 2025-10-12 23:34:56,932 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,091 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,092 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,092 | INFO     | [job] validate thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,166 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,187 | INFO     | [data] control thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,209 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,243 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,295 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,297 | INFO     | all payload control threads have been joined
[2025-10-12 19:35:49] 2025-10-12 23:34:57,657 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,815 | INFO     | [job] control thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:57,949 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:58,069 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:58,284 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:58,305 | INFO     | [payload] control thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:34:58,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:35:49] 2025-10-12 23:35:02,662 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:35:49] 2025-10-12 23:35:25,327 | INFO     | PID=3404742 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:35:49] 2025-10-12 23:35:25,327 | INFO     | .. there are 56 such processes running
[2025-10-12 19:35:49] 2025-10-12 23:35:25,331 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:35:49] 2025-10-12 23:35:25,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:35:49] 2025-10-12 23:35:25,331 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:35:49] 2025-10-12 23:35:41,295 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:35:49] 2025-10-12 23:35:43,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140408419915584)>', '<ExcThread(monitor, started 140407849613056)>']
[2025-10-12 19:35:49] 2025-10-12 23:35:43,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:35:49] 2025-10-12 23:35:43,473 | INFO     | [monitor] control thread has ended
[2025-10-12 19:35:49] 2025-10-12 23:35:48,194 | INFO     | all workflow threads have been joined
[2025-10-12 19:35:49] 2025-10-12 23:35:48,194 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:35:49] 2025-10-12 23:35:48,195 | INFO     | traces error code: 0
[2025-10-12 19:35:49] 2025-10-12 23:35:48,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:35:49] 2025-10-12 23:35:48,581 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:35:49] 2025-10-12 23:35:48,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:35:49] 2025-10-12 23:35:48,607 [wrapper] pilotpid: 3404742
[2025-10-12 19:35:49] 2025-10-12 23:35:48,653 [wrapper] Pilot exit status: 0
[2025-10-12 19:35:49] 2025-10-12 23:35:48,686 [wrapper] pandaids: 6840082221
[2025-10-12 19:35:49] 2025-10-12 23:35:48,863 [wrapper] cleanup supervisor_pilot  782318 3404744
[2025-10-12 19:35:49] 2025-10-12 23:35:48,886 [wrapper] Test setup, not cleaning
[2025-10-12 19:35:49] 2025-10-12 23:35:48,914 [wrapper] apfmon messages muted
[2025-10-12 19:35:49] 2025-10-12 23:35:48,921 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:35:49] 2025-10-12 23:35:48,924 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:35:49]  *** Error codes and diagnostics ***
[2025-10-12 19:35:49]     "exeErrorCode": 0,
[2025-10-12 19:35:49]     "exeErrorDiag": "",
[2025-10-12 19:35:49]     "pilotErrorCode": 0,
[2025-10-12 19:35:49]     "pilotErrorDiag": "",
[2025-10-12 19:35:49]  *** Listing of results directory ***
[2025-10-12 19:35:49] total 419512
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 09:53 queuedata.json
[2025-10-12 19:35:49] -rwx------. 1 boincer umatlas     36292 Oct 12 09:55 runpilot2-wrapper.sh
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:55 pilot3.tar.gz
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:35:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:13 run_atlas
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:13 job.xml
[2025-10-12 19:35:49] -rw-r--r--. 2 boincer umatlas 219331324 Oct 12 14:13 EVNT.46676267._004043.pool.root.1
[2025-10-12 19:35:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:13 start_atlas.sh
[2025-10-12 19:35:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:13 shared
[2025-10-12 19:35:49] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 14:13 input.tar.gz
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:13 boinc_lockfile
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:13 pandaJob.out
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas    975528 Oct 12 14:14 agis_schedconf.cvmfs.json
[2025-10-12 19:35:49] drwx------. 5 boincer umatlas      4096 Oct 12 14:14 pilot3
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas      6936 Oct 12 19:29 init_data.xml
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas 200256029 Oct 12 19:33 HITS.46676269._080036.pool.root.1
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas       531 Oct 12 19:33 boinc_task_state.xml
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas      1049 Oct 12 19:34 memory_monitor_summary.json
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas    553316 Oct 12 19:34 log.46676269._080036.job.log.tgz.1
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas      7805 Oct 12 19:34 heartbeat.json
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas        95 Oct 12 19:35 pilot_heartbeat.json
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas        28 Oct 12 19:35 wrapper_checkpoint.txt
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:35 boinc_mmap_file
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas      4824 Oct 12 19:35 pilotlog.txt
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas   2488696 Oct 12 19:35 log.46676269._080036.job.log.1
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas       357 Oct 12 19:35 output.list
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:35 runtime_log
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas   3061760 Oct 12 19:35 result.tar.gz
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 19:35 runtime_log.err
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas       659 Oct 12 19:35 4sLODmpiBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmy1TMDmYqtLOm.diag
[2025-10-12 19:35:49] -rw-r--r--. 1 boincer umatlas     21250 Oct 12 19:35 stderr.txt
[2025-10-12 19:35:49] HITS file was successfully produced:
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas 200256029 Oct 12 19:33 shared/HITS.pool.root.1
[2025-10-12 19:35:49]  *** Contents of shared directory: ***
[2025-10-12 19:35:49] total 413332
[2025-10-12 19:35:49] -rw-r--r--. 2 boincer umatlas 219331324 Oct 12 14:13 ATLAS.root_0
[2025-10-12 19:35:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:13 start_atlas.sh
[2025-10-12 19:35:49] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 14:13 input.tar.gz
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas 200256029 Oct 12 19:33 HITS.pool.root.1
[2025-10-12 19:35:49] -rw-------. 1 boincer umatlas   3061760 Oct 12 19:35 result.tar.gz
19:35:50 (3385530): run_atlas exited; CPU time 34744.622513
19:35:50 (3385530): called boinc_finish(0)

</stderr_txt>
]]>

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