Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:55:42 (2097309): wrapper (7.7.26015): starting
00:55:42 (2097309): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 00:55:42] Arguments: --nthreads 4
[2025-10-14 00:55:42] Threads: 4
[2025-10-14 00:55:42] Checking for CVMFS
[2025-10-14 00:55:42] No cvmfs_config command found, will try listing directly
[2025-10-14 00:55:42] CVMFS is ok
[2025-10-14 00:55:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 00:55:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 00:55:42] Further information can be found at the LHC@home message board.
[2025-10-14 00:55:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 00:55:42] Checking for apptainer binary...
[2025-10-14 00:55:42] which: no apptainer in ((null))
[2025-10-14 00:55:42] apptainer is not installed, using version from CVMFS
[2025-10-14 00:55:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 00:55:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-14 00:55:42] apptainer works
[2025-10-14 00:55:42] Set ATHENA_PROC_NUMBER=4
[2025-10-14 00:55:42] Set ATHENA_CORE_NUMBER=4
[2025-10-14 00:55:43] Starting ATLAS job with PandaID=6840081007
[2025-10-14 00:55:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 04:20:16]  *** The last 200 lines of the pilot log: ***
[2025-10-14 04:20:16] 2025-10-14 01:54:17,602 | INFO     | time since job start (10705s) is within the limit (172800.0s)
[2025-10-14 04:20:16] 2025-10-14 01:54:18,551 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-14 04:20:16] 2025-10-14 01:54:18,561 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2531.69684375
[2025-10-14 04:20:16] 2025-10-14 01:54:18,574 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6840081007/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 04:20:16] 2025-10-14 01:54:18,574 | INFO     | extracted standard info from prmon json
[2025-10-14 04:20:16] 2025-10-14 01:54:18,575 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 04:20:16] 2025-10-14 01:54:18,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 04:20:16] 2025-10-14 01:54:18,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 04:20:16] 2025-10-14 01:54:18,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 04:20:16] 2025-10-14 01:54:18,579 | INFO     | fitting pss+swap vs Time
[2025-10-14 04:20:16] 2025-10-14 01:54:18,579 | INFO     | sum of square deviations: 1661798600.0
[2025-10-14 04:20:16] 2025-10-14 01:54:18,580 | INFO     | sum of deviations: -8024297643.000002
[2025-10-14 04:20:16] 2025-10-14 01:54:18,580 | INFO     | mean x: 1760401485.0
[2025-10-14 04:20:16] 2025-10-14 01:54:18,580 | INFO     | mean y: 2351748.3314285716
[2025-10-14 04:20:16] 2025-10-14 01:54:18,580 | INFO     | -- intersect: 8502771406.176371
[2025-10-14 04:20:16] 2025-10-14 01:54:18,580 | INFO     | intersect: 8502771406.176371
[2025-10-14 04:20:16] 2025-10-14 01:54:18,581 | INFO     | chi2: 1.4830816297465126
[2025-10-14 04:20:16] 2025-10-14 01:54:18,581 | INFO     | sum of square deviations: 1523386702.5
[2025-10-14 04:20:16] 2025-10-14 01:54:18,582 | INFO     | sum of deviations: -7733218483.499997
[2025-10-14 04:20:16] 2025-10-14 01:54:18,582 | INFO     | mean x: 1760401332.5
[2025-10-14 04:20:16] 2025-10-14 01:54:18,582 | INFO     | mean y: 2352069.123529412
[2025-10-14 04:20:16] 2025-10-14 01:54:18,582 | INFO     | -- intersect: 8938735786.091824
[2025-10-14 04:20:16] 2025-10-14 01:54:18,582 | INFO     | intersect: 8938735786.091824
[2025-10-14 04:20:16] 2025-10-14 01:54:18,583 | INFO     | chi2: 1.4818680212912598
[2025-10-14 04:20:16] 2025-10-14 01:54:18,583 | INFO     | current chi2=1.4818680212912598 (change=0.08183018593927202 %)
[2025-10-14 04:20:16] 2025-10-14 01:54:18,583 | INFO     | right removable region: 169
[2025-10-14 04:20:16] 2025-10-14 01:54:18,583 | INFO     | sum of square deviations: 1523386702.5
[2025-10-14 04:20:16] 2025-10-14 01:54:18,584 | INFO     | sum of deviations: -24342207898.5
[2025-10-14 04:20:16] 2025-10-14 01:54:18,584 | INFO     | mean x: 1760401637.5
[2025-10-14 04:20:16] 2025-10-14 01:54:18,584 | INFO     | mean y: 2369324.276470588
[2025-10-14 04:20:16] 2025-10-14 01:54:18,584 | INFO     | -- intersect: 28131840701.807304
[2025-10-14 04:20:16] 2025-10-14 01:54:18,585 | INFO     | intersect: 28131840701.807304
[2025-10-14 04:20:16] 2025-10-14 01:54:18,585 | INFO     | chi2: 0.28248874857183365
[2025-10-14 04:20:16] 2025-10-14 01:54:18,585 | INFO     | current chi2=0.28248874857183365 (change=80.95258258845021 %)
[2025-10-14 04:20:16] 2025-10-14 01:54:18,585 | INFO     | sum of square deviations: 1392881930.0
[2025-10-14 04:20:16] 2025-10-14 01:54:18,586 | INFO     | sum of deviations: -15997230540.999996
[2025-10-14 04:20:16] 2025-10-14 01:54:18,586 | INFO     | mean x: 1760401790.0
[2025-10-14 04:20:16] 2025-10-14 01:54:18,586 | INFO     | mean y: 2359557.212121212
[2025-10-14 04:20:16] 2025-10-14 01:54:18,586 | INFO     | -- intersect: 20220550828.75734
[2025-10-14 04:20:16] 2025-10-14 01:54:18,587 | INFO     | intersect: 20220550828.75734
[2025-10-14 04:20:16] 2025-10-14 01:54:18,587 | INFO     | chi2: 0.22978484477160147
[2025-10-14 04:20:16] 2025-10-14 01:54:18,587 | INFO     | current chi2=0.22978484477160147 (change=18.656992204710832 %)
[2025-10-14 04:20:16] 2025-10-14 01:54:18,587 | INFO     | left removable region: 20
[2025-10-14 04:20:16] 2025-10-14 01:54:18,587 | INFO     | sum of square deviations: 1025693650.0
[2025-10-14 04:20:16] 2025-10-14 01:54:18,588 | INFO     | sum of deviations: 2756824362.0000005
[2025-10-14 04:20:16] 2025-10-14 01:54:18,588 | INFO     | mean x: 1760401912.0
[2025-10-14 04:20:16] 2025-10-14 01:54:18,588 | INFO     | mean y: 2335075.610738255
[2025-10-14 04:20:16] 2025-10-14 01:54:18,588 | INFO     | -- intersect: -4729213060.533988
[2025-10-14 04:20:16] 2025-10-14 01:54:18,588 | INFO     | intersect: -4729213060.533988
[2025-10-14 04:20:16] 2025-10-14 01:54:18,589 | INFO     | chi2: 0.00043400265670818995
[2025-10-14 04:20:16] 2025-10-14 01:54:18,589 | INFO     | -- intersect: -4729213060.533988
[2025-10-14 04:20:16] 2025-10-14 01:54:18,589 | INFO     | current memory leak: 2.69 B/s (using 149 data points, chi2=0.00)
[2025-10-14 04:20:16] 2025-10-14 01:54:18,589 | INFO     | could have reported an average CPU frequency of 2581 MHz (9 samples)
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | ..............................
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | . Timing measurements:
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | . get job = 0 s
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | . initial setup = 1 s
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | . payload setup = 5 s
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | . stage-in = 0 s
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | . payload execution = 10673 s
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | . stage-out = 0 s
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | . log creation = 0 s
[2025-10-14 04:20:16] 2025-10-14 01:54:18,590 | INFO     | ..............................
[2025-10-14 04:20:16] 2025-10-14 01:54:19,048 | INFO     | 
[2025-10-14 04:20:16] 2025-10-14 01:54:19,048 | INFO     | job summary report
[2025-10-14 04:20:16] 2025-10-14 01:54:19,048 | INFO     | --------------------------------------------------
[2025-10-14 04:20:16] 2025-10-14 01:54:19,048 | INFO     | PanDA job id: 6840081007
[2025-10-14 04:20:16] 2025-10-14 01:54:19,048 | INFO     | task id: 46676269
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | errors: (none)
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | pilot state: finished 
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | transexitcode: 0
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | exeerrorcode: 0
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | exeerrordiag: 
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | exitcode: 0
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | exitmsg: OK
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | cpuconsumptiontime: 40993 s
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | nevents: 400
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | neventsw: 0
[2025-10-14 04:20:16] 2025-10-14 01:54:19,049 | INFO     | pid: 2108009
[2025-10-14 04:20:16] 2025-10-14 01:54:19,050 | INFO     | pgrp: 2108009
[2025-10-14 04:20:16] 2025-10-14 01:54:19,050 | INFO     | corecount: 4
[2025-10-14 04:20:16] 2025-10-14 01:54:19,050 | INFO     | event service: False
[2025-10-14 04:20:16] 2025-10-14 01:54:19,050 | INFO     | sizes: {0: 2348029, 1: 2348896, 5: 2349158, 12: 2349214, 10681: 2378265, 10682: 2378264, 10683: 2387524, 10691: 2387726}
[2025-10-14 04:20:16] 2025-10-14 01:54:19,050 | INFO     | --------------------------------------------------
[2025-10-14 04:20:16] 2025-10-14 01:54:19,050 | INFO     | 
[2025-10-14 04:20:16] 2025-10-14 01:54:19,050 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-10-14 04:20:16] 2025-10-14 01:54:19,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,072 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 04:20:16] 2025-10-14 01:54:19,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 04:20:16] 2025-10-14 01:54:19,073 | INFO     | job 6840081007 has completed (purged errors)
[2025-10-14 04:20:16] 2025-10-14 01:54:19,073 | INFO     | overall cleanup function is called
[2025-10-14 04:20:16] 2025-10-14 01:54:19,224 | INFO     | PID=2101085 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-14 04:20:16] 2025-10-14 01:54:19,224 | INFO     | .. there are 8 such processes running
[2025-10-14 04:20:16] 2025-10-14 01:54:20,082 | INFO     | --- collectZombieJob: --- 10, [2108009]
[2025-10-14 04:20:16] 2025-10-14 01:54:20,082 | INFO     | zombie collector waiting for pid 2108009
[2025-10-14 04:20:16] 2025-10-14 01:54:20,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 04:20:16] 2025-10-14 01:54:20,083 | INFO     | collected zombie processes
[2025-10-14 04:20:16] 2025-10-14 01:54:20,083 | INFO     | will attempt to kill all subprocesses of pid=2108009
[2025-10-14 04:20:16] 2025-10-14 01:54:20,478 | INFO     | process IDs to be killed: [2108009] (in reverse order)
[2025-10-14 04:20:16] 2025-10-14 01:54:20,596 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 04:20:16] 2025-10-14 01:54:20,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 04:20:16] 2025-10-14 01:54:20,609 | INFO     | did not find any defunct processes belonging to 2108009
[2025-10-14 04:20:16] 2025-10-14 01:54:20,621 | INFO     | did not find any defunct processes belonging to 2108009
[2025-10-14 04:20:16] 2025-10-14 01:54:20,622 | INFO     | ready for new job
[2025-10-14 04:20:16] 2025-10-14 01:54:20,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 04:20:16] 2025-10-14 01:54:20,624 | INFO     | ***************************************
[2025-10-14 04:20:16] 2025-10-14 01:54:20,625 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 04:20:16] 2025-10-14 01:54:20,625 | INFO     | ***************************************
[2025-10-14 04:20:16] 2025-10-14 01:54:20,625 | INFO     | 
[2025-10-14 04:20:16] 2025-10-14 01:54:20,629 | INFO     | architecture information:
[2025-10-14 04:20:16] 2025-10-14 01:54:20,630 | INFO     | executing command: cat /etc/os-release
[2025-10-14 04:20:16] 2025-10-14 01:54:20,645 | INFO     | cat /etc/os-release:
[2025-10-14 04:20:16] NAME="CentOS Linux"
[2025-10-14 04:20:16] VERSION="7 (Core)"
[2025-10-14 04:20:16] ID="centos"
[2025-10-14 04:20:16] ID_LIKE="rhel fedora"
[2025-10-14 04:20:16] VERSION_ID="7"
[2025-10-14 04:20:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 04:20:16] ANSI_COLOR="0;31"
[2025-10-14 04:20:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 04:20:16] HOME_URL="https://www.centos.org/"
[2025-10-14 04:20:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 04:20:16] 
[2025-10-14 04:20:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 04:20:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 04:20:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 04:20:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 04:20:16] 
[2025-10-14 04:20:16] 2025-10-14 01:54:20,646 | INFO     | ***************************************
[2025-10-14 04:20:16] 2025-10-14 01:54:21,148 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-10-14 04:20:16] 2025-10-14 01:54:21,167 | INFO     | sufficient remaining disk space (700603957248 B)
[2025-10-14 04:20:16] 2025-10-14 01:54:21,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 04:20:16] 2025-10-14 01:54:21,168 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 04:20:16] 2025-10-14 01:54:21,168 | INFO     | update_server=False
[2025-10-14 04:20:16] 2025-10-14 01:54:21,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 04:20:16] 2025-10-14 01:54:21,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 04:20:16] 2025-10-14 01:54:21,169 | INFO     | aborting loop
[2025-10-14 04:20:16] 2025-10-14 01:54:21,169 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 04:20:16] 2025-10-14 01:54:21,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 04:20:16] 2025-10-14 01:54:21,620 | INFO     | all data control threads have been joined
[2025-10-14 04:20:16] 2025-10-14 01:54:22,173 | INFO     | [job] retrieve thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:22,174 | INFO     | [job] job monitor thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:22,236 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:22,301 | INFO     | all payload control threads have been joined
[2025-10-14 04:20:16] 2025-10-14 01:54:22,437 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:22,625 | INFO     | [data] control thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:22,825 | INFO     | all job control threads have been joined
[2025-10-14 04:20:16] 2025-10-14 01:54:22,891 | INFO     | [payload] failed_post thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:22,950 | INFO     | [data] copytool_in thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:23,174 | INFO     | [data] copytool_out thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:23,306 | INFO     | [payload] control thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:23,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:23,460 | INFO     | [payload] validate_post thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:23,492 | INFO     | [job] validate thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:23,542 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:23,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 04:20:16] 2025-10-14 01:54:23,830 | INFO     | [job] control thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:24,713 | INFO     | [job] queue monitor thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:25,217 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 04:20:16] 2025-10-14 01:54:51,752 | INFO     | PID=2101085 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 04:20:16] 2025-10-14 01:54:51,752 | INFO     | .. there are 8 such processes running
[2025-10-14 04:20:16] 2025-10-14 01:54:51,753 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 04:20:16] 2025-10-14 01:54:51,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 04:20:16] 2025-10-14 01:54:51,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 04:20:16] 2025-10-14 01:55:09,234 | INFO     | [monitor] cgroup control has ended
[2025-10-14 04:20:16] 2025-10-14 01:55:09,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23016359647040)>', '<ExcThread(monitor, started 23015916025600)>']
[2025-10-14 04:20:16] 2025-10-14 01:55:10,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 04:20:16] 2025-10-14 01:55:10,849 | INFO     | [monitor] control thread has ended
[2025-10-14 04:20:16] 2025-10-14 01:55:14,914 | INFO     | all workflow threads have been joined
[2025-10-14 04:20:16] 2025-10-14 01:55:14,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 04:20:16] 2025-10-14 01:55:14,914 | INFO     | traces error code: 0
[2025-10-14 04:20:16] 2025-10-14 01:55:14,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 04:20:16] 2025-10-14 01:55:15,053 [wrapper] ==== pilot stdout END ====
[2025-10-14 04:20:16] 2025-10-14 01:55:15,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 04:20:16] 2025-10-14 01:55:15,058 [wrapper] pilotpid: 2101085
[2025-10-14 04:20:16] 2025-10-14 01:55:15,061 [wrapper] Pilot exit status: 0
[2025-10-14 04:20:16] 2025-10-14 01:55:15,071 [wrapper] pandaids: 6840081007
[2025-10-14 04:20:16] 2025-10-14 01:55:15,148 [wrapper] cleanup supervisor_pilot 2397418 2101086
[2025-10-14 04:20:16] 2025-10-14 01:55:15,151 [wrapper] Test setup, not cleaning
[2025-10-14 04:20:16] 2025-10-14 01:55:15,154 [wrapper] apfmon messages muted
[2025-10-14 04:20:16] 2025-10-14 01:55:15,156 [wrapper] ==== wrapper stdout END ====
[2025-10-14 04:20:16] 2025-10-14 01:55:15,159 [wrapper] ==== wrapper stderr END ====
[2025-10-14 04:20:16]  *** Error codes and diagnostics ***
[2025-10-14 04:20:16]     "exeErrorCode": 0,
[2025-10-14 04:20:16]     "exeErrorDiag": "",
[2025-10-14 04:20:16]     "pilotErrorCode": 0,
[2025-10-14 04:20:16]     "pilotErrorDiag": "",
[2025-10-14 04:20:16]  *** Listing of results directory ***
[2025-10-14 04:20:16] total 410548
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:22 pilot3.tar.gz
[2025-10-14 04:20:16] -rwx------ 1 boinc boinc     36292 Oct 12 15:22 runpilot2-wrapper.sh
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:22 queuedata.json
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc       100 Oct 14 00:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 04:20:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 00:55 run_atlas
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc       105 Oct 14 00:55 job.xml
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc      6635 Oct 14 00:55 init_data.xml
[2025-10-14 04:20:16] -rw-r--r-- 2 boinc boinc 223201035 Oct 14 00:55 EVNT.46676267._003862.pool.root.1
[2025-10-14 04:20:16] drwxrwx--x 2 boinc boinc      4096 Oct 14 00:55 shared
[2025-10-14 04:20:16] -rw-r--r-- 2 boinc boinc    569672 Oct 14 00:55 input.tar.gz
[2025-10-14 04:20:16] -rw-r--r-- 2 boinc boinc     15120 Oct 14 00:55 start_atlas.sh
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc         0 Oct 14 00:55 boinc_lockfile
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc      2550 Oct 14 00:55 pandaJob.out
[2025-10-14 04:20:16] -rw------- 1 boinc boinc    972799 Oct 14 00:55 agis_schedconf.cvmfs.json
[2025-10-14 04:20:16] -rw------- 1 boinc boinc   1560580 Oct 14 00:55 agis_ddmendpoints.agis.ALL.json
[2025-10-14 04:20:16] drwx------ 5 boinc boinc      4096 Oct 14 00:55 pilot3
[2025-10-14 04:20:16] -rw------- 1 boinc boinc 189548588 Oct 14 03:53 HITS.46676269._079379.pool.root.1
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc       528 Oct 14 03:53 boinc_task_state.xml
[2025-10-14 04:20:16] -rw------- 1 boinc boinc      1035 Oct 14 03:54 memory_monitor_summary.json
[2025-10-14 04:20:16] -rw------- 1 boinc boinc    359328 Oct 14 03:54 log.46676269._079379.job.log.tgz.1
[2025-10-14 04:20:16] -rw------- 1 boinc boinc      7829 Oct 14 03:54 heartbeat.json
[2025-10-14 04:20:16] -rw------- 1 boinc boinc        95 Oct 14 03:54 pilot_heartbeat.json
[2025-10-14 04:20:16] -rw------- 1 boinc boinc      4833 Oct 14 03:55 pilotlog.txt
[2025-10-14 04:20:16] -rw------- 1 boinc boinc   1515520 Oct 14 03:55 log.46676269._079379.job.log.1
[2025-10-14 04:20:16] -rw------- 1 boinc boinc       357 Oct 14 03:55 output.list
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc       620 Oct 14 03:55 runtime_log
[2025-10-14 04:20:16] -rw------- 1 boinc boinc   1894400 Oct 14 03:55 result.tar.gz
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc      9070 Oct 14 03:55 runtime_log.err
[2025-10-14 04:20:16] -rw------- 1 boinc boinc       665 Oct 14 03:55 naSLDmHDBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIzTMDm7CvzEn.diag
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc        27 Oct 14 04:19 wrapper_checkpoint.txt
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc      8192 Oct 14 04:20 boinc_mmap_file
[2025-10-14 04:20:16] -rw-r--r-- 1 boinc boinc     20992 Oct 14 04:20 stderr.txt
[2025-10-14 04:20:16] HITS file was successfully produced:
[2025-10-14 04:20:16] -rw------- 1 boinc boinc 189548588 Oct 14 03:53 shared/HITS.pool.root.1
[2025-10-14 04:20:16]  *** Contents of shared directory: ***
[2025-10-14 04:20:16] total 405516
[2025-10-14 04:20:16] -rw-r--r-- 2 boinc boinc 223201035 Oct 14 00:55 ATLAS.root_0
[2025-10-14 04:20:16] -rw-r--r-- 2 boinc boinc    569672 Oct 14 00:55 input.tar.gz
[2025-10-14 04:20:16] -rw-r--r-- 2 boinc boinc     15120 Oct 14 00:55 start_atlas.sh
[2025-10-14 04:20:16] -rw------- 1 boinc boinc 189548588 Oct 14 03:53 HITS.pool.root.1
[2025-10-14 04:20:16] -rw------- 1 boinc boinc   1894400 Oct 14 03:55 result.tar.gz
04:20:18 (2097309): run_atlas exited; CPU time 41426.787235
04:20:18 (2097309): called boinc_finish(0)

</stderr_txt>
]]>

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