Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:51:14 (519771): wrapper (7.7.26015): starting
13:51:14 (519771): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 13:51:14] Arguments: --nthreads 9
[2025-10-12 13:51:14] Threads: 9
[2025-10-12 13:51:14] Checking for CVMFS
[2025-10-12 13:51:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:51:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:51:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:51:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:51:15] 2.13.2.0 128637 116298 225064 151630 1 134 25742213 39288833 5771 16776704 1 79327136 99.637 76751335 36511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:51:15] CVMFS is ok
[2025-10-12 13:51:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:51:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:51:15] Further information can be found at the LHC@home message board.
[2025-10-12 13:51:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:51:15] Checking for apptainer binary...
[2025-10-12 13:51:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:51:15] Running /usr/bin/apptainer --version
[2025-10-12 13:51:15] apptainer version 1.4.3-1.el9
[2025-10-12 13:51:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:51:15] c-211-17.aglt2.org
[2025-10-12 13:51:15] apptainer works
[2025-10-12 13:51:15] Set ATHENA_PROC_NUMBER=9
[2025-10-12 13:51:15] Set ATHENA_CORE_NUMBER=9
[2025-10-12 13:51:15] Starting ATLAS job with PandaID=6840225074
[2025-10-12 13:51:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:35:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:35:13] 2025-10-12 23:34:08,962 | INFO     | sum of deviations: 318169519.51190186
[2025-10-12 19:35:13] 2025-10-12 23:34:08,963 | INFO     | mean x: 1760301733.8690476
[2025-10-12 19:35:13] 2025-10-12 23:34:08,963 | INFO     | mean y: 2569084.693452381
[2025-10-12 19:35:13] 2025-10-12 23:34:08,963 | INFO     | -- intersect: -45043924.3809486
[2025-10-12 19:35:13] 2025-10-12 23:34:08,963 | INFO     | intersect: -45043924.3809486
[2025-10-12 19:35:13] 2025-10-12 23:34:08,963 | INFO     | chi2: 2.255170196519685
[2025-10-12 19:35:13] 2025-10-12 23:34:08,964 | INFO     | sum of square deviations: 11245760349.546816
[2025-10-12 19:35:13] 2025-10-12 23:34:08,993 | INFO     | sum of deviations: 24817523717.286995
[2025-10-12 19:35:13] 2025-10-12 23:34:08,994 | INFO     | mean x: 1760301581.3746223
[2025-10-12 19:35:13] 2025-10-12 23:34:08,994 | INFO     | mean y: 2576220.2960725077
[2025-10-12 19:35:13] 2025-10-12 23:34:08,994 | INFO     | -- intersect: -3882116756.2088885
[2025-10-12 19:35:13] 2025-10-12 23:34:08,994 | INFO     | intersect: -3882116756.2088885
[2025-10-12 19:35:13] 2025-10-12 23:34:09,026 | INFO     | chi2: 1.3791569832731367
[2025-10-12 19:35:13] 2025-10-12 23:34:09,026 | INFO     | current chi2=1.3791569832731367 (change=38.84466079759589 %)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,027 | INFO     | sum of square deviations: 10743863176.334406
[2025-10-12 19:35:13] 2025-10-12 23:34:09,030 | INFO     | sum of deviations: 24403793692.70245
[2025-10-12 19:35:13] 2025-10-12 23:34:09,031 | INFO     | mean x: 1760301428.880368
[2025-10-12 19:35:13] 2025-10-12 23:34:09,031 | INFO     | mean y: 2576094.8128834357
[2025-10-12 19:35:13] 2025-10-12 23:34:09,031 | INFO     | -- intersect: -3995802533.2759256
[2025-10-12 19:35:13] 2025-10-12 23:34:09,031 | INFO     | intersect: -3995802533.2759256
[2025-10-12 19:35:13] 2025-10-12 23:34:09,040 | INFO     | chi2: 1.3794346668060968
[2025-10-12 19:35:13] 2025-10-12 23:34:09,040 | INFO     | current chi2=1.3794346668060968 (change=-0.020134294814000836 %)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,040 | INFO     | right removable region: 325
[2025-10-12 19:35:13] 2025-10-12 23:34:09,041 | INFO     | sum of square deviations: 11245684709.546816
[2025-10-12 19:35:13] 2025-10-12 23:34:09,052 | INFO     | sum of deviations: -43098006233.44106
[2025-10-12 19:35:13] 2025-10-12 23:34:09,053 | INFO     | mean x: 1760301886.3746223
[2025-10-12 19:35:13] 2025-10-12 23:34:09,053 | INFO     | mean y: 2581774.4712990937
[2025-10-12 19:35:13] 2025-10-12 23:34:09,053 | INFO     | -- intersect: 6748769635.074123
[2025-10-12 19:35:13] 2025-10-12 23:34:09,053 | INFO     | intersect: 6748769635.074123
[2025-10-12 19:35:13] 2025-10-12 23:34:09,053 | INFO     | chi2: 1.0337095721484637
[2025-10-12 19:35:13] 2025-10-12 23:34:09,054 | INFO     | current chi2=1.0337095721484637 (change=54.16268032702158 %)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,054 | INFO     | sum of square deviations: 10743772222.589056
[2025-10-12 19:35:13] 2025-10-12 23:34:09,065 | INFO     | sum of deviations: -26115879139.99387
[2025-10-12 19:35:13] 2025-10-12 23:34:09,066 | INFO     | mean x: 1760302038.8711658
[2025-10-12 19:35:13] 2025-10-12 23:34:09,066 | INFO     | mean y: 2576611.9049079753
[2025-10-12 19:35:13] 2025-10-12 23:34:09,066 | INFO     | -- intersect: 4281505310.745637
[2025-10-12 19:35:13] 2025-10-12 23:34:09,066 | INFO     | intersect: 4281505310.745637
[2025-10-12 19:35:13] 2025-10-12 23:34:09,067 | INFO     | chi2: 0.9590074326900009
[2025-10-12 19:35:13] 2025-10-12 23:34:09,067 | INFO     | current chi2=0.9590074326900009 (change=7.226608079404912 %)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,067 | INFO     | left removable region: 20
[2025-10-12 19:35:13] 2025-10-12 23:34:09,076 | INFO     | sum of square deviations: 8798524522.996693
[2025-10-12 19:35:13] 2025-10-12 23:34:09,079 | INFO     | sum of deviations: 6122253996.449181
[2025-10-12 19:35:13] 2025-10-12 23:34:09,079 | INFO     | mean x: 1760302008.3967214
[2025-10-12 19:35:13] 2025-10-12 23:34:09,079 | INFO     | mean y: 2581420.649180328
[2025-10-12 19:35:13] 2025-10-12 23:34:09,079 | INFO     | -- intersect: -1222284859.793236
[2025-10-12 19:35:13] 2025-10-12 23:34:09,079 | INFO     | intersect: -1222284859.793236
[2025-10-12 19:35:13] 2025-10-12 23:34:09,088 | INFO     | chi2: 0.003855678674167099
[2025-10-12 19:35:13] 2025-10-12 23:34:09,088 | INFO     | -- intersect: -1222284859.793236
[2025-10-12 19:35:13] 2025-10-12 23:34:09,088 | INFO     | current memory leak: 0.70 B/s (using 305 data points, chi2=0.00)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,089 | INFO     | could have reported an average CPU frequency of 2600 MHz (15 samples)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,089 | INFO     | ..............................
[2025-10-12 19:35:13] 2025-10-12 23:34:09,090 | INFO     | . Timing measurements:
[2025-10-12 19:35:13] 2025-10-12 23:34:09,090 | INFO     | . get job = 0 s
[2025-10-12 19:35:13] 2025-10-12 23:34:09,090 | INFO     | . initial setup = 2 s
[2025-10-12 19:35:13] 2025-10-12 23:34:09,090 | INFO     | . payload setup = 6 s
[2025-10-12 19:35:13] 2025-10-12 23:34:09,090 | INFO     | . stage-in = 0 s
[2025-10-12 19:35:13] 2025-10-12 23:34:09,090 | INFO     | . payload execution = 20480 s
[2025-10-12 19:35:13] 2025-10-12 23:34:09,090 | INFO     | . stage-out = 9 s
[2025-10-12 19:35:13] 2025-10-12 23:34:09,090 | INFO     | . log creation = 2 s
[2025-10-12 19:35:13] 2025-10-12 23:34:09,090 | INFO     | ..............................
[2025-10-12 19:35:13] 2025-10-12 23:34:09,446 | INFO     | 
[2025-10-12 19:35:13] 2025-10-12 23:34:09,446 | INFO     | job summary report
[2025-10-12 19:35:13] 2025-10-12 23:34:09,446 | INFO     | --------------------------------------------------
[2025-10-12 19:35:13] 2025-10-12 23:34:09,446 | INFO     | PanDA job id: 6840225074
[2025-10-12 19:35:13] 2025-10-12 23:34:09,447 | INFO     | task id: 46676269
[2025-10-12 19:35:13] 2025-10-12 23:34:09,447 | INFO     | errors: (none)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:35:13] 2025-10-12 23:34:09,447 | INFO     | pilot state: finished 
[2025-10-12 19:35:13] 2025-10-12 23:34:09,447 | INFO     | transexitcode: 0
[2025-10-12 19:35:13] 2025-10-12 23:34:09,447 | INFO     | exeerrorcode: 0
[2025-10-12 19:35:13] 2025-10-12 23:34:09,447 | INFO     | exeerrordiag: 
[2025-10-12 19:35:13] 2025-10-12 23:34:09,447 | INFO     | exitcode: 0
[2025-10-12 19:35:13] 2025-10-12 23:34:09,447 | INFO     | exitmsg: OK
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | cpuconsumptiontime: 52549 s
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | nevents: 400
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | neventsw: 0
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | pid: 535421
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | pgrp: 535421
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | corecount: 9
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | event service: False
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 20492: 2382847, 20493: 2382846, 20503: 2392084, 20545: 2392222}
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | --------------------------------------------------
[2025-10-12 19:35:13] 2025-10-12 23:34:09,448 | INFO     | 
[2025-10-12 19:35:13] 2025-10-12 23:34:09,449 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 19:35:13] 2025-10-12 23:34:09,477 | INFO     | time since job start (20561s) is within the limit (172800.0s)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:35:13] 2025-10-12 23:34:09,513 | INFO     | job 6840225074 has completed (purged errors)
[2025-10-12 19:35:13] 2025-10-12 23:34:09,513 | INFO     | overall cleanup function is called
[2025-10-12 19:35:13] 2025-10-12 23:34:10,527 | INFO     | --- collectZombieJob: --- 10, [535421]
[2025-10-12 19:35:13] 2025-10-12 23:34:10,527 | INFO     | zombie collector waiting for pid 535421
[2025-10-12 19:35:13] 2025-10-12 23:34:10,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:35:13] 2025-10-12 23:34:10,527 | INFO     | collected zombie processes
[2025-10-12 19:35:13] 2025-10-12 23:34:10,527 | INFO     | will attempt to kill all subprocesses of pid=535421
[2025-10-12 19:35:13] 2025-10-12 23:34:12,212 | INFO     | process IDs to be killed: [535421] (in reverse order)
[2025-10-12 19:35:13] 2025-10-12 23:34:12,551 | INFO     | PID=523983 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 19:35:13] 2025-10-12 23:34:12,551 | INFO     | .. there are 7 such processes running
[2025-10-12 19:35:13] 2025-10-12 23:34:12,630 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:35:13] 2025-10-12 23:34:12,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:35:13] 2025-10-12 23:34:12,654 | INFO     | did not find any defunct processes belonging to 535421
[2025-10-12 19:35:13] 2025-10-12 23:34:12,688 | INFO     | did not find any defunct processes belonging to 535421
[2025-10-12 19:35:13] 2025-10-12 23:34:12,689 | INFO     | ready for new job
[2025-10-12 19:35:13] 2025-10-12 23:34:12,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:35:13] 2025-10-12 23:34:12,692 | INFO     | ***************************************
[2025-10-12 19:35:13] 2025-10-12 23:34:12,692 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:35:13] 2025-10-12 23:34:12,692 | INFO     | ***************************************
[2025-10-12 19:35:13] 2025-10-12 23:34:12,692 | INFO     | 
[2025-10-12 19:35:13] 2025-10-12 23:34:12,704 | INFO     | architecture information:
[2025-10-12 19:35:13] 2025-10-12 23:34:12,706 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:35:13] 2025-10-12 23:34:12,868 | INFO     | cat /etc/os-release:
[2025-10-12 19:35:13] NAME="CentOS Linux"
[2025-10-12 19:35:13] VERSION="7 (Core)"
[2025-10-12 19:35:13] ID="centos"
[2025-10-12 19:35:13] ID_LIKE="rhel fedora"
[2025-10-12 19:35:13] VERSION_ID="7"
[2025-10-12 19:35:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:35:13] ANSI_COLOR="0;31"
[2025-10-12 19:35:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:35:13] HOME_URL="https://www.centos.org/"
[2025-10-12 19:35:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:35:13] 
[2025-10-12 19:35:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:35:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:35:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:35:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:35:13] 
[2025-10-12 19:35:13] 2025-10-12 23:34:12,868 | INFO     | ***************************************
[2025-10-12 19:35:13] 2025-10-12 23:34:13,372 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 19:35:13] 2025-10-12 23:34:13,593 | INFO     | sufficient remaining disk space (53107228672 B)
[2025-10-12 19:35:13] 2025-10-12 23:34:13,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:35:13] 2025-10-12 23:34:13,594 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:35:13] 2025-10-12 23:34:13,594 | INFO     | update_server=False
[2025-10-12 19:35:13] 2025-10-12 23:34:13,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:35:13] 2025-10-12 23:34:13,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:35:13] 2025-10-12 23:34:13,656 | INFO     | all data control threads have been joined
[2025-10-12 19:35:13] 2025-10-12 23:34:13,803 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 19:35:13] 2025-10-12 23:34:13,803 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 19:35:13] 2025-10-12 23:34:13,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:35:13] 2025-10-12 23:34:13,803 | INFO     | will abort loop
[2025-10-12 19:35:13] 2025-10-12 23:34:13,819 | INFO     | all payload control threads have been joined
[2025-10-12 19:35:13] 2025-10-12 23:34:14,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:35:13] 2025-10-12 23:34:14,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:35:13] 2025-10-12 23:34:14,554 | INFO     | all job control threads have been joined
[2025-10-12 19:35:13] 2025-10-12 23:34:14,600 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:14,662 | INFO     | [data] control thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:14,790 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:14,809 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:14,825 | INFO     | [payload] control thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:14,859 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:15,062 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:15,216 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:15,301 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:15,356 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:15,419 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:15,544 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:15,560 | INFO     | [job] control thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:15,602 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:15,878 | INFO     | [job] validate thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:18,108 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:35:13] 2025-10-12 23:34:45,349 | INFO     | PID=523983 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 19:35:13] 2025-10-12 23:34:45,349 | INFO     | .. there are 7 such processes running
[2025-10-12 19:35:13] 2025-10-12 23:34:45,349 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:35:13] 2025-10-12 23:34:45,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:35:13] 2025-10-12 23:34:45,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:35:13] 2025-10-12 23:35:04,990 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:35:13] 2025-10-12 23:35:05,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139908227233600)>', '<ExcThread(monitor, started 139907712395008)>']
[2025-10-12 19:35:13] 2025-10-12 23:35:05,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:35:13] 2025-10-12 23:35:05,528 | INFO     | [monitor] control thread has ended
[2025-10-12 19:35:13] 2025-10-12 23:35:10,176 | INFO     | all workflow threads have been joined
[2025-10-12 19:35:13] 2025-10-12 23:35:10,176 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:35:13] 2025-10-12 23:35:10,176 | INFO     | traces error code: 0
[2025-10-12 19:35:13] 2025-10-12 23:35:10,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:35:13] 2025-10-12 23:35:12,800 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:35:13] 2025-10-12 23:35:12,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:35:13] 2025-10-12 23:35:12,807 [wrapper] pilotpid: 523983
[2025-10-12 19:35:13] 2025-10-12 23:35:12,810 [wrapper] Pilot exit status: 0
[2025-10-12 19:35:13] 2025-10-12 23:35:12,986 [wrapper] pandaids: 6840225074
[2025-10-12 19:35:13] 2025-10-12 23:35:13,363 [wrapper] cleanup supervisor_pilot 1000759 523984
[2025-10-12 19:35:13] 2025-10-12 23:35:13,367 [wrapper] Test setup, not cleaning
[2025-10-12 19:35:13] 2025-10-12 23:35:13,371 [wrapper] apfmon messages muted
[2025-10-12 19:35:13] 2025-10-12 23:35:13,376 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:35:13] 2025-10-12 23:35:13,385 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:35:13]  *** Error codes and diagnostics ***
[2025-10-12 19:35:13]     "exeErrorCode": 0,
[2025-10-12 19:35:13]     "exeErrorDiag": "",
[2025-10-12 19:35:13]     "pilotErrorCode": 0,
[2025-10-12 19:35:13]     "pilotErrorDiag": "",
[2025-10-12 19:35:13]  *** Listing of results directory ***
[2025-10-12 19:35:13] total 414040
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 11:00 pilot3.tar.gz
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 11:38 queuedata.json
[2025-10-12 19:35:13] -rwx------. 1 boincer umatlas     36292 Oct 12 11:38 runpilot2-wrapper.sh
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:35:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:51 run_atlas
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:51 job.xml
[2025-10-12 19:35:13] -rw-r--r--. 2 boincer umatlas 219598899 Oct 12 13:51 EVNT.46676267._004577.pool.root.1
[2025-10-12 19:35:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:51 start_atlas.sh
[2025-10-12 19:35:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:51 shared
[2025-10-12 19:35:13] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 13:51 input.tar.gz
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:51 boinc_lockfile
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 13:51 pandaJob.out
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas    975528 Oct 12 13:51 agis_schedconf.cvmfs.json
[2025-10-12 19:35:13] drwx------. 5 boincer umatlas      4096 Oct 12 13:51 pilot3
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 19:29 init_data.xml
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas 193841049 Oct 12 19:32 HITS.46676269._082368.pool.root.1
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas       531 Oct 12 19:32 boinc_task_state.xml
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas      1050 Oct 12 19:33 memory_monitor_summary.json
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas    554326 Oct 12 19:33 log.46676269._082368.job.log.tgz.1
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas        95 Oct 12 19:33 pilot_heartbeat.json
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas      7832 Oct 12 19:34 heartbeat.json
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:35 boinc_mmap_file
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas        28 Oct 12 19:35 wrapper_checkpoint.txt
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas      5008 Oct 12 19:35 pilotlog.txt
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas   2759864 Oct 12 19:35 log.46676269._082368.job.log.1
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas       357 Oct 12 19:35 output.list
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:35 runtime_log
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas   3338240 Oct 12 19:35 result.tar.gz
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 19:35 runtime_log.err
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas       660 Oct 12 19:35 931LDmSKDS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTSkNDmPDQwDm.diag
[2025-10-12 19:35:13] -rw-r--r--. 1 boincer umatlas     21159 Oct 12 19:35 stderr.txt
[2025-10-12 19:35:13] HITS file was successfully produced:
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas 193841049 Oct 12 19:32 shared/HITS.pool.root.1
[2025-10-12 19:35:13]  *** Contents of shared directory: ***
[2025-10-12 19:35:13] total 407596
[2025-10-12 19:35:13] -rw-r--r--. 2 boincer umatlas 219598899 Oct 12 13:51 ATLAS.root_0
[2025-10-12 19:35:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:51 start_atlas.sh
[2025-10-12 19:35:13] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 13:51 input.tar.gz
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas 193841049 Oct 12 19:32 HITS.pool.root.1
[2025-10-12 19:35:13] -rw-------. 1 boincer umatlas   3338240 Oct 12 19:35 result.tar.gz
19:35:15 (519771): run_atlas exited; CPU time 52930.812640
19:35:15 (519771): called boinc_finish(0)

</stderr_txt>
]]>

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