Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:29:37 (3821166): wrapper (7.7.26015): starting
14:29:37 (3821166): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 14:29:37] Arguments: --nthreads 9
[2025-10-12 14:29:37] Threads: 9
[2025-10-12 14:29:37] Checking for CVMFS
[2025-10-12 14:29:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:29:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:29:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:29:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:29:38] 2.13.2.0 4167112 129622 480644 151631 2 584 16754699 32935937 37904 16776704 0 457602141 99.676 375992083 17035 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 14:29:38] CVMFS is ok
[2025-10-12 14:29:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:29:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:29:38] Further information can be found at the LHC@home message board.
[2025-10-12 14:29:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:29:38] Checking for apptainer binary...
[2025-10-12 14:29:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:29:38] Running /usr/bin/apptainer --version
[2025-10-12 14:29:38] apptainer version 1.4.3-1.el9
[2025-10-12 14:29:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:29:38] c7-16-8.aglt2.org
[2025-10-12 14:29:38] apptainer works
[2025-10-12 14:29:38] Set ATHENA_PROC_NUMBER=9
[2025-10-12 14:29:38] Set ATHENA_CORE_NUMBER=9
[2025-10-12 14:29:39] Starting ATLAS job with PandaID=6840081126
[2025-10-12 14:29:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:46:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:46:31] 2025-10-12 21:45:30,802 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:46:31] 2025-10-12 21:45:30,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:46:31] 2025-10-12 21:45:30,877 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:46:31] 2025-10-12 21:45:30,878 | INFO     | sum of square deviations: 2160555340.9947653
[2025-10-12 17:46:31] 2025-10-12 21:45:30,906 | INFO     | sum of deviations: 31096660347.994774
[2025-10-12 17:46:31] 2025-10-12 21:45:30,906 | INFO     | mean x: 1760299653.0052357
[2025-10-12 17:46:31] 2025-10-12 21:45:30,906 | INFO     | mean y: 2197479.005235602
[2025-10-12 17:46:31] 2025-10-12 21:45:30,906 | INFO     | -- intersect: -25333622151.05047
[2025-10-12 17:46:31] 2025-10-12 21:45:30,906 | INFO     | intersect: -25333622151.05047
[2025-10-12 17:46:31] 2025-10-12 21:45:30,907 | INFO     | chi2: 2.6205465702516704
[2025-10-12 17:46:31] 2025-10-12 21:45:30,907 | INFO     | sum of square deviations: 1995278128.4946144
[2025-10-12 17:46:31] 2025-10-12 21:45:30,908 | INFO     | sum of deviations: 44536765389.77418
[2025-10-12 17:46:31] 2025-10-12 21:45:30,908 | INFO     | mean x: 1760299500.5053763
[2025-10-12 17:46:31] 2025-10-12 21:45:30,908 | INFO     | mean y: 2209657.7258064514
[2025-10-12 17:46:31] 2025-10-12 21:45:30,908 | INFO     | -- intersect: -39289578664.98483
[2025-10-12 17:46:31] 2025-10-12 21:45:30,908 | INFO     | intersect: -39289578664.98483
[2025-10-12 17:46:31] 2025-10-12 21:45:30,908 | INFO     | chi2: 1.8132392854565325
[2025-10-12 17:46:31] 2025-10-12 21:45:30,909 | INFO     | current chi2=1.8132392854565325 (change=30.80682839067448 %)
[2025-10-12 17:46:31] 2025-10-12 21:45:30,984 | INFO     | sum of square deviations: 1838652240.9944742
[2025-10-12 17:46:31] 2025-10-12 21:45:30,985 | INFO     | sum of deviations: 43656459231.30941
[2025-10-12 17:46:31] 2025-10-12 21:45:30,985 | INFO     | mean x: 1760299348.0055249
[2025-10-12 17:46:31] 2025-10-12 21:45:30,985 | INFO     | mean y: 2208803.690607735
[2025-10-12 17:46:31] 2025-10-12 21:45:30,985 | INFO     | -- intersect: -41793860625.69677
[2025-10-12 17:46:31] 2025-10-12 21:45:30,986 | INFO     | intersect: -41793860625.69677
[2025-10-12 17:46:31] 2025-10-12 21:45:30,986 | INFO     | chi2: 1.809678269065984
[2025-10-12 17:46:31] 2025-10-12 21:45:30,986 | INFO     | current chi2=1.809678269065984 (change=0.19638976604523634 %)
[2025-10-12 17:46:31] 2025-10-12 21:45:30,986 | INFO     | right removable region: 180
[2025-10-12 17:46:31] 2025-10-12 21:45:30,986 | INFO     | sum of square deviations: 1995277518.4946144
[2025-10-12 17:46:31] 2025-10-12 21:45:30,987 | INFO     | sum of deviations: -233251718.34409332
[2025-10-12 17:46:31] 2025-10-12 21:45:30,987 | INFO     | mean x: 1760299805.5053763
[2025-10-12 17:46:31] 2025-10-12 21:45:30,987 | INFO     | mean y: 2226139.3440860217
[2025-10-12 17:46:31] 2025-10-12 21:45:30,987 | INFO     | -- intersect: 208008518.3009161
[2025-10-12 17:46:31] 2025-10-12 21:45:30,987 | INFO     | intersect: 208008518.3009161
[2025-10-12 17:46:31] 2025-10-12 21:45:31,013 | INFO     | chi2: 0.9614410339065952
[2025-10-12 17:46:31] 2025-10-12 21:45:31,014 | INFO     | current chi2=0.9614410339065952 (change=63.311431102929774 %)
[2025-10-12 17:46:31] 2025-10-12 21:45:31,014 | INFO     | sum of square deviations: 1838651020.9944742
[2025-10-12 17:46:31] 2025-10-12 21:45:31,015 | INFO     | sum of deviations: -6515908976.31492
[2025-10-12 17:46:31] 2025-10-12 21:45:31,015 | INFO     | mean x: 1760299958.0055249
[2025-10-12 17:46:31] 2025-10-12 21:45:31,015 | INFO     | mean y: 2232195.314917127
[2025-10-12 17:46:31] 2025-10-12 21:45:31,015 | INFO     | -- intersect: 6240476520.315321
[2025-10-12 17:46:31] 2025-10-12 21:45:31,015 | INFO     | intersect: 6240476520.315321
[2025-10-12 17:46:31] 2025-10-12 21:45:31,015 | INFO     | chi2: 0.8850092330800303
[2025-10-12 17:46:31] 2025-10-12 21:45:31,015 | INFO     | current chi2=0.8850092330800303 (change=7.9497127885213885 %)
[2025-10-12 17:46:31] 2025-10-12 21:45:31,016 | INFO     | left removable region: 20
[2025-10-12 17:46:31] 2025-10-12 21:45:31,016 | INFO     | sum of square deviations: 1270045071.9937544
[2025-10-12 17:46:31] 2025-10-12 21:45:31,016 | INFO     | sum of deviations: 4987057991.35
[2025-10-12 17:46:31] 2025-10-12 21:45:31,017 | INFO     | mean x: 1760299927.50625
[2025-10-12 17:46:31] 2025-10-12 21:45:31,017 | INFO     | mean y: 2250679.65
[2025-10-12 17:46:31] 2025-10-12 21:45:31,021 | INFO     | -- intersect: -6909880247.216855
[2025-10-12 17:46:31] 2025-10-12 21:45:31,021 | INFO     | intersect: -6909880247.216855
[2025-10-12 17:46:31] 2025-10-12 21:45:31,021 | INFO     | chi2: 0.044266214548676366
[2025-10-12 17:46:31] 2025-10-12 21:45:31,021 | INFO     | -- intersect: -6909880247.216855
[2025-10-12 17:46:31] 2025-10-12 21:45:31,021 | INFO     | current memory leak: 3.93 B/s (using 160 data points, chi2=0.04)
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | could have reported an average CPU frequency of 3112 MHz (10 samples)
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | ..............................
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | . Timing measurements:
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | . get job = 0 s
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | . initial setup = 4 s
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | . payload setup = 12 s
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | . stage-in = 0 s
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | . payload execution = 11652 s
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | . stage-out = 4 s
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | . log creation = 0 s
[2025-10-12 17:46:31] 2025-10-12 21:45:31,022 | INFO     | ..............................
[2025-10-12 17:46:31] 2025-10-12 21:45:31,180 | INFO     | 
[2025-10-12 17:46:31] 2025-10-12 21:45:31,180 | INFO     | job summary report
[2025-10-12 17:46:31] 2025-10-12 21:45:31,180 | INFO     | --------------------------------------------------
[2025-10-12 17:46:31] 2025-10-12 21:45:31,180 | INFO     | PanDA job id: 6840081126
[2025-10-12 17:46:31] 2025-10-12 21:45:31,180 | INFO     | task id: 46676269
[2025-10-12 17:46:31] 2025-10-12 21:45:31,180 | INFO     | errors: (none)
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | pilot state: finished 
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | transexitcode: 0
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | exeerrorcode: 0
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | exeerrordiag: 
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | exitcode: 0
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | exitmsg: OK
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | cpuconsumptiontime: 31906 s
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | nevents: 400
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | neventsw: 0
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | pid: 3850621
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | pgrp: 3850621
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | corecount: 9
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | event service: False
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 13: 2349203, 23: 2349259, 11670: 2378738, 11675: 2387736, 11678: 2387792, 11696: 2387986}
[2025-10-12 17:46:31] 2025-10-12 21:45:31,181 | INFO     | --------------------------------------------------
[2025-10-12 17:46:31] 2025-10-12 21:45:31,182 | INFO     | 
[2025-10-12 17:46:31] 2025-10-12 21:45:31,182 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 17:46:31] 2025-10-12 21:45:31,215 | INFO     | time since job start (11728s) is within the limit (172800.0s)
[2025-10-12 17:46:31] 2025-10-12 21:45:31,290 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,292 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,292 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,292 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:46:31] 2025-10-12 21:45:31,292 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,292 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:46:31] 2025-10-12 21:45:31,292 | INFO     | job 6840081126 has completed (purged errors)
[2025-10-12 17:46:31] 2025-10-12 21:45:31,292 | INFO     | overall cleanup function is called
[2025-10-12 17:46:31] 2025-10-12 21:45:32,327 | INFO     | --- collectZombieJob: --- 10, [3850621]
[2025-10-12 17:46:31] 2025-10-12 21:45:32,327 | INFO     | zombie collector waiting for pid 3850621
[2025-10-12 17:46:31] 2025-10-12 21:45:32,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:46:31] 2025-10-12 21:45:32,327 | INFO     | collected zombie processes
[2025-10-12 17:46:31] 2025-10-12 21:45:32,328 | INFO     | will attempt to kill all subprocesses of pid=3850621
[2025-10-12 17:46:31] 2025-10-12 21:45:34,342 | INFO     | process IDs to be killed: [3850621] (in reverse order)
[2025-10-12 17:46:31] 2025-10-12 21:45:34,664 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:46:31] 2025-10-12 21:45:34,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:46:31] 2025-10-12 21:45:34,825 | INFO     | did not find any defunct processes belonging to 3850621
[2025-10-12 17:46:31] 2025-10-12 21:45:34,934 | INFO     | did not find any defunct processes belonging to 3850621
[2025-10-12 17:46:31] 2025-10-12 21:45:34,935 | INFO     | ready for new job
[2025-10-12 17:46:31] 2025-10-12 21:45:34,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:46:31] 2025-10-12 21:45:34,945 | INFO     | ***************************************
[2025-10-12 17:46:31] 2025-10-12 21:45:34,945 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:46:31] 2025-10-12 21:45:34,945 | INFO     | ***************************************
[2025-10-12 17:46:31] 2025-10-12 21:45:34,945 | INFO     | 
[2025-10-12 17:46:31] 2025-10-12 21:45:34,969 | INFO     | architecture information:
[2025-10-12 17:46:31] 2025-10-12 21:45:34,977 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:46:31] 2025-10-12 21:45:35,051 | INFO     | cat /etc/os-release:
[2025-10-12 17:46:31] NAME="CentOS Linux"
[2025-10-12 17:46:31] VERSION="7 (Core)"
[2025-10-12 17:46:31] ID="centos"
[2025-10-12 17:46:31] ID_LIKE="rhel fedora"
[2025-10-12 17:46:31] VERSION_ID="7"
[2025-10-12 17:46:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:46:31] ANSI_COLOR="0;31"
[2025-10-12 17:46:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:46:31] HOME_URL="https://www.centos.org/"
[2025-10-12 17:46:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:46:31] 
[2025-10-12 17:46:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:46:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:46:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:46:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:46:31] 
[2025-10-12 17:46:31] 2025-10-12 21:45:35,052 | INFO     | ***************************************
[2025-10-12 17:46:31] 2025-10-12 21:45:35,555 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 17:46:31] 2025-10-12 21:45:35,694 | INFO     | sufficient remaining disk space (73897345024 B)
[2025-10-12 17:46:31] 2025-10-12 21:45:35,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:46:31] 2025-10-12 21:45:35,695 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:46:31] 2025-10-12 21:45:35,695 | INFO     | update_server=False
[2025-10-12 17:46:31] 2025-10-12 21:45:35,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:46:31] 2025-10-12 21:45:36,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:46:31] 2025-10-12 21:45:36,155 | INFO     | aborting loop
[2025-10-12 17:46:31] 2025-10-12 21:45:36,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:46:31] 2025-10-12 21:45:36,334 | INFO     | all data control threads have been joined
[2025-10-12 17:46:31] 2025-10-12 21:45:36,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:46:31] 2025-10-12 21:45:36,701 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:36,795 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:36,820 | INFO     | [job] validate thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:36,820 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:37,050 | INFO     | all payload control threads have been joined
[2025-10-12 17:46:31] 2025-10-12 21:45:37,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:46:31] 2025-10-12 21:45:37,181 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:37,200 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:37,252 | INFO     | all job control threads have been joined
[2025-10-12 17:46:31] 2025-10-12 21:45:37,321 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:37,343 | INFO     | [data] control thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:37,372 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:37,372 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:38,056 | INFO     | [payload] control thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:38,057 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:38,057 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:38,260 | INFO     | [job] control thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:38,362 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:45:41,170 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:46:31] 2025-10-12 21:46:07,029 | INFO     | PID=3827509 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:46:31] 2025-10-12 21:46:07,029 | INFO     | .. there are 46 such processes running
[2025-10-12 17:46:31] 2025-10-12 21:46:07,042 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:46:31] 2025-10-12 21:46:07,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:46:31] 2025-10-12 21:46:07,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:46:31] 2025-10-12 21:46:23,702 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:46:31] 2025-10-12 21:46:24,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139869772109632)>', '<ExcThread(monitor, started 139869250623232)>']
[2025-10-12 17:46:31] 2025-10-12 21:46:25,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:46:31] 2025-10-12 21:46:25,186 | INFO     | [monitor] control thread has ended
[2025-10-12 17:46:31] 2025-10-12 21:46:29,280 | INFO     | all workflow threads have been joined
[2025-10-12 17:46:31] 2025-10-12 21:46:29,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:46:31] 2025-10-12 21:46:29,280 | INFO     | traces error code: 0
[2025-10-12 17:46:31] 2025-10-12 21:46:29,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:46:31] 2025-10-12 21:46:30,089 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:46:31] 2025-10-12 21:46:30,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:46:31] 2025-10-12 21:46:30,212 [wrapper] pilotpid: 3827509
[2025-10-12 17:46:31] 2025-10-12 21:46:30,235 [wrapper] Pilot exit status: 0
[2025-10-12 17:46:31] 2025-10-12 21:46:30,398 [wrapper] pandaids: 6840081126
[2025-10-12 17:46:31] 2025-10-12 21:46:30,641 [wrapper] cleanup supervisor_pilot  694512 3827510
[2025-10-12 17:46:31] 2025-10-12 21:46:30,644 [wrapper] Test setup, not cleaning
[2025-10-12 17:46:31] 2025-10-12 21:46:30,647 [wrapper] apfmon messages muted
[2025-10-12 17:46:31] 2025-10-12 21:46:30,650 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:46:31] 2025-10-12 21:46:30,652 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:46:31]  *** Error codes and diagnostics ***
[2025-10-12 17:46:31]     "exeErrorCode": 0,
[2025-10-12 17:46:31]     "exeErrorDiag": "",
[2025-10-12 17:46:31]     "pilotErrorCode": 0,
[2025-10-12 17:46:31]     "pilotErrorDiag": "",
[2025-10-12 17:46:31]  *** Listing of results directory ***
[2025-10-12 17:46:31] total 406680
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 09:22 pilot3.tar.gz
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 09:34 queuedata.json
[2025-10-12 17:46:31] -rwx------. 1 boincer umatlas     36292 Oct 12 09:35 runpilot2-wrapper.sh
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas       100 Oct 12 14:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:46:31] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 14:29 run_atlas
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas       105 Oct 12 14:29 job.xml
[2025-10-12 17:46:31] -rw-r--r--. 2 boincer umatlas 218757483 Oct 12 14:29 EVNT.46676267._003867.pool.root.1
[2025-10-12 17:46:31] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 14:29 shared
[2025-10-12 17:46:31] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 14:29 input.tar.gz
[2025-10-12 17:46:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:29 start_atlas.sh
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas         0 Oct 12 14:29 boinc_lockfile
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 14:29 pandaJob.out
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas    975528 Oct 12 14:29 agis_schedconf.cvmfs.json
[2025-10-12 17:46:31] drwx------. 5 boincer umatlas      4096 Oct 12 14:30 pilot3
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas 189906599 Oct 12 17:43 HITS.46676269._079494.pool.root.1
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas       531 Oct 12 17:43 boinc_task_state.xml
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas      1045 Oct 12 17:45 memory_monitor_summary.json
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas      6936 Oct 12 17:45 init_data.xml
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas   1560580 Oct 12 17:45 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas    428423 Oct 12 17:45 log.46676269._079494.job.log.tgz.1
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas      7790 Oct 12 17:45 heartbeat.json
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas        95 Oct 12 17:46 pilot_heartbeat.json
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:46 boinc_mmap_file
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas        28 Oct 12 17:46 wrapper_checkpoint.txt
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas      4824 Oct 12 17:46 pilotlog.txt
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas   1506336 Oct 12 17:46 log.46676269._079494.job.log.1
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas       357 Oct 12 17:46 output.list
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:46 runtime_log
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas   1955840 Oct 12 17:46 result.tar.gz
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 17:46 runtime_log.err
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas       656 Oct 12 17:46 7INMDmLPBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY1jNDmFYMbbn.diag
[2025-10-12 17:46:31] -rw-r--r--. 1 boincer umatlas     21025 Oct 12 17:46 stderr.txt
[2025-10-12 17:46:31] HITS file was successfully produced:
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas 189906599 Oct 12 17:43 shared/HITS.pool.root.1
[2025-10-12 17:46:31]  *** Contents of shared directory: ***
[2025-10-12 17:46:31] total 401584
[2025-10-12 17:46:31] -rw-r--r--. 2 boincer umatlas 218757483 Oct 12 14:29 ATLAS.root_0
[2025-10-12 17:46:31] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 14:29 input.tar.gz
[2025-10-12 17:46:31] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 14:29 start_atlas.sh
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas 189906599 Oct 12 17:43 HITS.pool.root.1
[2025-10-12 17:46:31] -rw-------. 1 boincer umatlas   1955840 Oct 12 17:46 result.tar.gz
17:46:32 (3821166): run_atlas exited; CPU time 32369.710309
17:46:32 (3821166): called boinc_finish(0)

</stderr_txt>
]]>

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