Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:50:22 (3070065): wrapper (7.7.26015): starting
04:50:22 (3070065): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 04:50:22] Arguments: --nthreads 3
[2025-10-13 04:50:22] Threads: 3
[2025-10-13 04:50:22] Checking for CVMFS
[2025-10-13 04:50:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:50:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:50:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:50:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:50:22] 2.9.2.0 1494257 5232 83120 151645 2 57 24181572 36864001 0 130560 0 4141916 99.991 178609 841 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 04:50:22] CVMFS is ok
[2025-10-13 04:50:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:50:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:50:22] Further information can be found at the LHC@home message board.
[2025-10-13 04:50:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:50:22] Checking for apptainer binary...
[2025-10-13 04:50:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:50:22] Running /usr/bin/apptainer --version
[2025-10-13 04:50:22] apptainer version 1.4.1-1.1
[2025-10-13 04:50:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:50:23] thA331a
[2025-10-13 04:50:23] apptainer works
[2025-10-13 04:50:23] Set ATHENA_PROC_NUMBER=3
[2025-10-13 04:50:23] Set ATHENA_CORE_NUMBER=3
[2025-10-13 04:50:23] Starting ATLAS job with PandaID=6840081228
[2025-10-13 04:50:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:11:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:11:42] 2025-10-13 04:11:11,860 | INFO     | did not find any defunct processes belonging to 3080222
[2025-10-13 06:11:42] 2025-10-13 04:11:11,860 | INFO     | ready for new job
[2025-10-13 06:11:42] 2025-10-13 04:11:11,861 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:11:42] 2025-10-13 04:11:11,861 | INFO     | ***************************************
[2025-10-13 06:11:42] 2025-10-13 04:11:11,861 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:11:42] 2025-10-13 04:11:11,861 | INFO     | ***************************************
[2025-10-13 06:11:42] 2025-10-13 04:11:11,861 | INFO     | 
[2025-10-13 06:11:42] 2025-10-13 04:11:11,862 | INFO     | architecture information:
[2025-10-13 06:11:42] 2025-10-13 04:11:11,862 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:11:42] 2025-10-13 04:11:11,870 | INFO     | cat /etc/os-release:
[2025-10-13 06:11:42] NAME="CentOS Linux"
[2025-10-13 06:11:42] VERSION="7 (Core)"
[2025-10-13 06:11:42] ID="centos"
[2025-10-13 06:11:42] ID_LIKE="rhel fedora"
[2025-10-13 06:11:42] VERSION_ID="7"
[2025-10-13 06:11:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:11:42] ANSI_COLOR="0;31"
[2025-10-13 06:11:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:11:42] HOME_URL="https://www.centos.org/"
[2025-10-13 06:11:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:11:42] 
[2025-10-13 06:11:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:11:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:11:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:11:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:11:42] 
[2025-10-13 06:11:42] 2025-10-13 04:11:11,870 | INFO     | ***************************************
[2025-10-13 06:11:42] 2025-10-13 04:11:12,373 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 06:11:42] 2025-10-13 04:11:12,386 | INFO     | sufficient remaining disk space (335775006720 B)
[2025-10-13 06:11:42] 2025-10-13 04:11:12,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:11:42] 2025-10-13 04:11:12,386 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:11:42] 2025-10-13 04:11:12,386 | INFO     | update_server=False
[2025-10-13 06:11:42] 2025-10-13 04:11:12,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:11:42] 2025-10-13 04:11:12,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:11:42] 2025-10-13 04:11:12,517 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 06:11:42] 2025-10-13 04:11:12,517 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 06:11:42] 2025-10-13 04:11:12,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:11:42] 2025-10-13 04:11:12,518 | INFO     | will abort loop
[2025-10-13 06:11:42] 2025-10-13 04:11:13,174 | INFO     | all data control threads have been joined
[2025-10-13 06:11:42] 2025-10-13 04:11:13,392 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:13,393 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:13,457 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:13,520 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:13,541 | INFO     | all payload control threads have been joined
[2025-10-13 06:11:42] 2025-10-13 04:11:13,623 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:13,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:11:42] 2025-10-13 04:11:13,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:11:42] 2025-10-13 04:11:13,778 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:13,783 | INFO     | all job control threads have been joined
[2025-10-13 06:11:42] 2025-10-13 04:11:14,125 | INFO     | [job] validate thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:14,180 | INFO     | [data] control thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:14,260 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:14,313 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:14,329 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:14,547 | INFO     | [payload] control thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:14,788 | INFO     | [job] control thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:15,642 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:17,664 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:23,409 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:11:42] 2025-10-13 04:11:24,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:11:42] 2025-10-13 04:11:33,904 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:11:42] 2025-10-13 04:11:34,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140541200131904)>', '<ExcThread(monitor, started 140540708378368)>']
[2025-10-13 06:11:42] 2025-10-13 04:11:39,495 | INFO     | all workflow threads have been joined
[2025-10-13 06:11:42] 2025-10-13 04:11:39,495 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:11:42] 2025-10-13 04:11:39,495 | INFO     | traces error code: 0
[2025-10-13 06:11:42] 2025-10-13 04:11:39,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:11:42] 2025-10-13 04:11:42,003 | INFO     | PID=3073788 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:11:42] 2025-10-13 04:11:42,004 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:11:42] 2025-10-13 04:11:42,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:11:42] 2025-10-13 04:11:42,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:11:42] 2025-10-13 04:11:42,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:11:42] 2025-10-13 04:11:42,004 | INFO     | [monitor] control thread has ended
[2025-10-13 06:11:42] 2025-10-13 04:11:42,050 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:11:42] 2025-10-13 04:11:42,052 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:11:42] 2025-10-13 04:11:42,054 [wrapper] pilotpid: 3073788
[2025-10-13 06:11:42] 2025-10-13 04:11:42,057 [wrapper] Pilot exit status: 0
[2025-10-13 06:11:42] 2025-10-13 04:11:42,064 [wrapper] pandaids: 6840081228
[2025-10-13 06:11:42] 2025-10-13 04:11:42,079 [wrapper] cleanup supervisor_pilot 3092903 3073789
[2025-10-13 06:11:42] 2025-10-13 04:11:42,081 [wrapper] Test setup, not cleaning
[2025-10-13 06:11:42] 2025-10-13 04:11:42,084 [wrapper] apfmon messages muted
[2025-10-13 06:11:42] 2025-10-13 04:11:42,086 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:11:42] 2025-10-13 04:11:42,088 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:11:42]  *** Error codes and diagnostics ***
[2025-10-13 06:11:42]     "exeErrorCode": 0,
[2025-10-13 06:11:42]     "exeErrorDiag": "",
[2025-10-13 06:11:42]     "pilotErrorCode": 0,
[2025-10-13 06:11:42]     "pilotErrorDiag": "",
[2025-10-13 06:11:42]  *** Listing of results directory ***
[2025-10-13 06:11:42] total 404588
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc    557409 Oct 12 15:22 pilot3.tar.gz
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc      5112 Oct 12 15:34 queuedata.json
[2025-10-13 06:11:42] -rwx------ 1 boinc boinc     36292 Oct 12 15:35 runpilot2-wrapper.sh
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc       100 Oct 13 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:11:42] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 04:50 run_atlas
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc       105 Oct 13 04:50 job.xml
[2025-10-13 06:11:42] -rw-r--r-- 2 boinc boinc 220112456 Oct 13 04:50 EVNT.46676267._003871.pool.root.1
[2025-10-13 06:11:42] -rw-r--r-- 2 boinc boinc    569682 Oct 13 04:50 input.tar.gz
[2025-10-13 06:11:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:50 start_atlas.sh
[2025-10-13 06:11:42] drwxrwx--x 2 boinc boinc      4096 Oct 13 04:50 shared
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:50 boinc_setup_complete
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc      6440 Oct 13 04:50 init_data.xml
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc         0 Oct 13 04:50 boinc_lockfile
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc      2550 Oct 13 04:50 pandaJob.out
[2025-10-13 06:11:42] -rw------- 1 boinc boinc    974373 Oct 13 04:50 agis_schedconf.cvmfs.json
[2025-10-13 06:11:42] -rw------- 1 boinc boinc   1560580 Oct 13 04:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:11:42] drwx------ 5 boinc boinc      4096 Oct 13 04:50 pilot3
[2025-10-13 06:11:42] -rw------- 1 boinc boinc 188383859 Oct 13 06:10 HITS.46676269._079596.pool.root.1
[2025-10-13 06:11:42] -rw------- 1 boinc boinc        95 Oct 13 06:10 pilot_heartbeat.json
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc       529 Oct 13 06:10 boinc_task_state.xml
[2025-10-13 06:11:42] -rw------- 1 boinc boinc      1019 Oct 13 06:10 memory_monitor_summary.json
[2025-10-13 06:11:42] -rw------- 1 boinc boinc    245015 Oct 13 06:11 log.46676269._079596.job.log.tgz.1
[2025-10-13 06:11:42] -rw------- 1 boinc boinc      7765 Oct 13 06:11 heartbeat.json
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc      8192 Oct 13 06:11 boinc_mmap_file
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc        27 Oct 13 06:11 wrapper_checkpoint.txt
[2025-10-13 06:11:42] -rw------- 1 boinc boinc       747 Oct 13 06:11 pilotlog.txt
[2025-10-13 06:11:42] -rw------- 1 boinc boinc    713108 Oct 13 06:11 log.46676269._079596.job.log.1
[2025-10-13 06:11:42] -rw------- 1 boinc boinc       357 Oct 13 06:11 output.list
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc       620 Oct 13 06:11 runtime_log
[2025-10-13 06:11:42] -rw------- 1 boinc boinc    972800 Oct 13 06:11 result.tar.gz
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc      8782 Oct 13 06:11 runtime_log.err
[2025-10-13 06:11:42] -rw------- 1 boinc boinc       659 Oct 13 06:11 RWzMDmLPBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm11jNDm7TjGHn.diag
[2025-10-13 06:11:42] -rw-r--r-- 1 boinc boinc      9965 Oct 13 06:11 stderr.txt
[2025-10-13 06:11:42] HITS file was successfully produced:
[2025-10-13 06:11:42] -rw------- 1 boinc boinc 188383859 Oct 13 06:10 shared/HITS.pool.root.1
[2025-10-13 06:11:42]  *** Contents of shared directory: ***
[2025-10-13 06:11:42] total 400464
[2025-10-13 06:11:42] -rw-r--r-- 2 boinc boinc 220112456 Oct 13 04:50 ATLAS.root_0
[2025-10-13 06:11:42] -rw-r--r-- 2 boinc boinc    569682 Oct 13 04:50 input.tar.gz
[2025-10-13 06:11:42] -rw-r--r-- 2 boinc boinc     15120 Oct 13 04:50 start_atlas.sh
[2025-10-13 06:11:42] -rw------- 1 boinc boinc 188383859 Oct 13 06:10 HITS.pool.root.1
[2025-10-13 06:11:42] -rw------- 1 boinc boinc    972800 Oct 13 06:11 result.tar.gz
06:11:43 (3070065): run_atlas exited; CPU time 13844.857337
06:11:43 (3070065): called boinc_finish(0)

</stderr_txt>
]]>

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