Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:51:34 (3265406): wrapper (7.7.26015): starting
01:51:34 (3265406): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 01:51:34] Arguments: --nthreads 8
[2025-10-13 01:51:34] Threads: 8
[2025-10-13 01:51:34] Checking for CVMFS
[2025-10-13 01:51:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:51:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:51:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:51:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:51:34] 2.13.2.0 1338992 5113 60508 151641 3 57 3212101 4097025 0 130560 0 5289256 99.993 177190 27197 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-13 01:51:34] CVMFS is ok
[2025-10-13 01:51:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:51:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:51:34] Further information can be found at the LHC@home message board.
[2025-10-13 01:51:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:51:34] Checking for apptainer binary...
[2025-10-13 01:51:34] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-13 01:51:34] apptainer is not installed, using version from CVMFS
[2025-10-13 01:51:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:51:34] pckeatlas02
[2025-10-13 01:51:34] apptainer works
[2025-10-13 01:51:34] Set ATHENA_PROC_NUMBER=8
[2025-10-13 01:51:34] Set ATHENA_CORE_NUMBER=8
[2025-10-13 01:51:34] Starting ATLAS job with PandaID=6840081387
[2025-10-13 01:51:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:11:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:11:51]  status=None
[2025-10-13 03:11:51]  status_code=0
[2025-10-13 03:11:51]  storage_token=
[2025-10-13 03:11:51]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6840081387/log.46676269._079755.job.log.tgz.1
[2025-10-13 03:11:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/fe/log.46676269._079755.job.log.tgz.1
[2025-10-13 03:11:51]  workdir=None
[2025-10-13 03:11:51] ]
[2025-10-13 03:11:51] 2025-10-13 01:10:39,336 | INFO     | transferring file log.46676269._079755.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6840081387/log.46676269._079755.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-13 03:11:51] 2025-10-13 01:10:39,336 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6840081387/log.46676269._079755.job.log.tgz.1 /var/lib/boinc/slots/19/log.46676269._079755.j
[2025-10-13 03:11:51] 2025-10-13 01:10:39,344 | INFO     | adding to output.list: log.46676269._079755.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/fe/log.46676269._079755.job.log.tg
[2025-10-13 03:11:51] 2025-10-13 01:10:39,344 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 03:11:51] 2025-10-13 01:10:39,344 | INFO     | summary of transferred files:
[2025-10-13 03:11:51] 2025-10-13 01:10:39,344 | INFO     |  -- lfn=log.46676269._079755.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 03:11:51] 2025-10-13 01:10:39,344 | INFO     | stage-out finished correctly
[2025-10-13 03:11:51] 2025-10-13 01:10:40,287 | WARNING  | process 3276439 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 03:11:51] 2025-10-13 01:10:40,287 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6840081387/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:11:51] 2025-10-13 01:10:40,316 | INFO     | number of running child processes to parent process 3276439: 1
[2025-10-13 03:11:51] 2025-10-13 01:10:40,316 | INFO     | maximum number of monitored processes: 6
[2025-10-13 03:11:51] 2025-10-13 01:10:40,692 | INFO     | time since job start (4741s) is within the limit (172800.0s)
[2025-10-13 03:11:51] 2025-10-13 01:10:41,958 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 03:11:51] 2025-10-13 01:10:42,697 | INFO     | time since job start (4743s) is within the limit (172800.0s)
[2025-10-13 03:11:51] 2025-10-13 01:10:42,819 | INFO     | monitor loop #361: job 0:6840081387 is in state 'finished'
[2025-10-13 03:11:51] 2025-10-13 01:10:42,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:11:51] 2025-10-13 01:10:43,361 | INFO     | job 6840081387 has state=finished
[2025-10-13 03:11:51] 2025-10-13 01:10:43,361 | INFO     | preparing for final server update for job 6840081387 in state='finished'
[2025-10-13 03:11:51] 2025-10-13 01:10:43,361 | INFO     | this job has now completed (state=finished)
[2025-10-13 03:11:51] 2025-10-13 01:10:43,361 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 03:11:51] 2025-10-13 01:10:43,361 | INFO     | log transfer has been attempted: DONE
[2025-10-13 03:11:51] 2025-10-13 01:10:43,361 | INFO     | job 6840081387 has finished - writing final server update
[2025-10-13 03:11:51] 2025-10-13 01:10:43,361 | INFO     | total number of processed events: 400 (read)
[2025-10-13 03:11:51] 2025-10-13 01:10:43,362 | INFO     | executing command: lscpu
[2025-10-13 03:11:51] 2025-10-13 01:10:43,370 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 03:11:51] 2025-10-13 01:10:44,703 | INFO     | time since job start (4745s) is within the limit (172800.0s)
[2025-10-13 03:11:51] 2025-10-13 01:10:45,322 | INFO     | monitor loop #362: job 0:6840081387 is in state 'finished'
[2025-10-13 03:11:51] 2025-10-13 01:10:45,322 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:11:51] 2025-10-13 01:10:45,982 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 03:11:51] 2025-10-13 01:10:45,983 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3857.630875
[2025-10-13 03:11:51] 2025-10-13 01:10:45,984 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6840081387/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:11:51] 2025-10-13 01:10:45,984 | INFO     | extracted standard info from prmon json
[2025-10-13 03:11:51] 2025-10-13 01:10:45,984 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:11:51] 2025-10-13 01:10:45,984 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:11:51] 2025-10-13 01:10:45,985 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:11:51] 2025-10-13 01:10:45,985 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:11:51] 2025-10-13 01:10:45,985 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | sum of square deviations: 110960220.0
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | sum of deviations: -12197961319.0
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | mean x: 1760315557.0
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | mean y: 2708954.6901408453
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | -- intersect: 193515853336.70328
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | intersect: 193515853336.70328
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | chi2: 0.13135559264976293
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | -- intersect: 193515853336.70328
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | current memory leak: -109.93 B/s (using 71 data points, chi2=0.13)
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | could have reported an average CPU frequency of 3752 MHz (6 samples)
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | ..............................
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | . Timing measurements:
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | . get job = 0 s
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | . initial setup = 0 s
[2025-10-13 03:11:51] 2025-10-13 01:10:45,986 | INFO     | . payload setup = 3 s
[2025-10-13 03:11:51] 2025-10-13 01:10:45,987 | INFO     | . stage-in = 0 s
[2025-10-13 03:11:51] 2025-10-13 01:10:45,987 | INFO     | . payload execution = 4720 s
[2025-10-13 03:11:51] 2025-10-13 01:10:45,987 | INFO     | . stage-out = 0 s
[2025-10-13 03:11:51] 2025-10-13 01:10:45,987 | INFO     | . log creation = 0 s
[2025-10-13 03:11:51] 2025-10-13 01:10:45,987 | INFO     | ..............................
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | 
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | job summary report
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | --------------------------------------------------
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | PanDA job id: 6840081387
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | task id: 46676269
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | errors: (none)
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | pilot state: finished 
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | transexitcode: 0
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | exeerrorcode: 0
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | exeerrordiag: 
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | exitcode: 0
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | exitmsg: OK
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | cpuconsumptiontime: 36009 s
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | nevents: 400
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | neventsw: 0
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | pid: 3276439
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | pgrp: 3276439
[2025-10-13 03:11:51] 2025-10-13 01:10:46,024 | INFO     | corecount: 8
[2025-10-13 03:11:51] 2025-10-13 01:10:46,025 | INFO     | event service: False
[2025-10-13 03:11:51] 2025-10-13 01:10:46,025 | INFO     | sizes: {0: 2348029, 1: 2348886, 3: 2349148, 11: 2349176, 4727: 2375462, 4728: 2384462, 4730: 2384646, 4734: 2384840}
[2025-10-13 03:11:51] 2025-10-13 01:10:46,025 | INFO     | --------------------------------------------------
[2025-10-13 03:11:51] 2025-10-13 01:10:46,025 | INFO     | 
[2025-10-13 03:11:51] 2025-10-13 01:10:46,025 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,034 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:11:51] 2025-10-13 01:10:46,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,034 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:11:51] 2025-10-13 01:10:46,034 | INFO     | job 6840081387 has completed (purged errors)
[2025-10-13 03:11:51] 2025-10-13 01:10:46,034 | INFO     | overall cleanup function is called
[2025-10-13 03:11:51] 2025-10-13 01:10:47,040 | INFO     | --- collectZombieJob: --- 10, [3276439]
[2025-10-13 03:11:51] 2025-10-13 01:10:47,040 | INFO     | zombie collector waiting for pid 3276439
[2025-10-13 03:11:51] 2025-10-13 01:10:47,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:11:51] 2025-10-13 01:10:47,040 | INFO     | collected zombie processes
[2025-10-13 03:11:51] 2025-10-13 01:10:47,040 | INFO     | will attempt to kill all subprocesses of pid=3276439
[2025-10-13 03:11:51] 2025-10-13 01:10:47,072 | INFO     | process IDs to be killed: [3276439] (in reverse order)
[2025-10-13 03:11:51] 2025-10-13 01:10:47,089 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:11:51] 2025-10-13 01:10:47,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:11:51] 2025-10-13 01:10:47,090 | INFO     | did not find any defunct processes belonging to 3276439
[2025-10-13 03:11:51] 2025-10-13 01:10:47,091 | INFO     | did not find any defunct processes belonging to 3276439
[2025-10-13 03:11:51] 2025-10-13 01:10:47,091 | INFO     | ready for new job
[2025-10-13 03:11:51] 2025-10-13 01:10:47,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:11:51] 2025-10-13 01:10:47,091 | INFO     | ***************************************
[2025-10-13 03:11:51] 2025-10-13 01:10:47,091 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:11:51] 2025-10-13 01:10:47,092 | INFO     | ***************************************
[2025-10-13 03:11:51] 2025-10-13 01:10:47,092 | INFO     | 
[2025-10-13 03:11:51] 2025-10-13 01:10:47,092 | INFO     | architecture information:
[2025-10-13 03:11:51] 2025-10-13 01:10:47,092 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:11:51] 2025-10-13 01:10:47,097 | INFO     | cat /etc/os-release:
[2025-10-13 03:11:51] NAME="CentOS Linux"
[2025-10-13 03:11:51] VERSION="7 (Core)"
[2025-10-13 03:11:51] ID="centos"
[2025-10-13 03:11:51] ID_LIKE="rhel fedora"
[2025-10-13 03:11:51] VERSION_ID="7"
[2025-10-13 03:11:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:11:51] ANSI_COLOR="0;31"
[2025-10-13 03:11:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:11:51] HOME_URL="https://www.centos.org/"
[2025-10-13 03:11:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:11:51] 
[2025-10-13 03:11:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:11:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:11:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:11:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:11:51] 
[2025-10-13 03:11:51] 2025-10-13 01:10:47,097 | INFO     | ***************************************
[2025-10-13 03:11:51] 2025-10-13 01:10:47,600 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-13 03:11:51] 2025-10-13 01:10:47,607 | INFO     | sufficient remaining disk space (118081191936 B)
[2025-10-13 03:11:51] 2025-10-13 01:10:47,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:11:51] 2025-10-13 01:10:47,607 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:11:51] 2025-10-13 01:10:47,607 | INFO     | update_server=False
[2025-10-13 03:11:51] 2025-10-13 01:10:47,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:11:51] 2025-10-13 01:10:47,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:11:51] 2025-10-13 01:10:47,607 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:11:51] 2025-10-13 01:10:47,825 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 03:11:51] 2025-10-13 01:10:47,826 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 03:11:51] 2025-10-13 01:10:47,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:11:51] 2025-10-13 01:10:47,826 | INFO     | will abort loop
[2025-10-13 03:11:51] 2025-10-13 01:10:47,870 | INFO     | all payload control threads have been joined
[2025-10-13 03:11:51] 2025-10-13 01:10:47,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:11:51] 2025-10-13 01:10:48,612 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:48,613 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:48,674 | INFO     | all data control threads have been joined
[2025-10-13 03:11:51] 2025-10-13 01:10:48,809 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:48,831 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:48,831 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:48,876 | INFO     | [payload] control thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:49,011 | INFO     | all job control threads have been joined
[2025-10-13 03:11:51] 2025-10-13 01:10:49,322 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:49,613 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:49,679 | INFO     | [data] control thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:49,683 | INFO     | [job] validate thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:49,698 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:49,792 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:49,879 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:50,016 | INFO     | [job] control thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:50,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:10:52,002 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:11:51] 2025-10-13 01:11:17,835 | INFO     | PID=3269141 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:11:51] 2025-10-13 01:11:17,836 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:11:51] 2025-10-13 01:11:17,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:11:51] 2025-10-13 01:11:17,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:11:51] 2025-10-13 01:11:46,399 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:11:51] 2025-10-13 01:11:46,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264349493056)>', '<ExcThread(monitor, started 140263230011136)>']
[2025-10-13 03:11:51] 2025-10-13 01:11:46,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:11:51] 2025-10-13 01:11:46,983 | INFO     | [monitor] control thread has ended
[2025-10-13 03:11:51] 2025-10-13 01:11:51,802 | INFO     | all workflow threads have been joined
[2025-10-13 03:11:51] 2025-10-13 01:11:51,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:11:51] 2025-10-13 01:11:51,803 | INFO     | traces error code: 0
[2025-10-13 03:11:51] 2025-10-13 01:11:51,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:11:51] 2025-10-13 01:11:51,861 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:11:51] 2025-10-13 01:11:51,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:11:51] 2025-10-13 01:11:51,863 [wrapper] pilotpid: 3269141
[2025-10-13 03:11:51] 2025-10-13 01:11:51,864 [wrapper] Pilot exit status: 0
[2025-10-13 03:11:51] 2025-10-13 01:11:51,868 [wrapper] pandaids: 6840081387
[2025-10-13 03:11:51] 2025-10-13 01:11:51,879 [wrapper] cleanup supervisor_pilot 3293029 3269142
[2025-10-13 03:11:51] 2025-10-13 01:11:51,880 [wrapper] Test setup, not cleaning
[2025-10-13 03:11:51] 2025-10-13 01:11:51,881 [wrapper] apfmon messages muted
[2025-10-13 03:11:51] 2025-10-13 01:11:51,882 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:11:51] 2025-10-13 01:11:51,883 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:11:51]  *** Error codes and diagnostics ***
[2025-10-13 03:11:51]     "exeErrorCode": 0,
[2025-10-13 03:11:51]     "exeErrorDiag": "",
[2025-10-13 03:11:51]     "pilotErrorCode": 0,
[2025-10-13 03:11:51]     "pilotErrorDiag": "",
[2025-10-13 03:11:51]  *** Listing of results directory ***
[2025-10-13 03:11:51] total 410972
[2025-10-13 03:11:51] -rwx------. 1 boinc boinc     36292 Oct 12 15:45 runpilot2-wrapper.sh
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc      5112 Oct 12 15:45 queuedata.json
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc    557409 Oct 12 15:45 pilot3.tar.gz
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc       100 Oct 13 01:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:11:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 01:51 run_atlas
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc       105 Oct 13 01:51 job.xml
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc      6275 Oct 13 01:51 init_data.xml
[2025-10-13 03:11:51] -rw-r--r--. 2 boinc boinc 218213812 Oct 13 01:51 EVNT.46676267._004001.pool.root.1
[2025-10-13 03:11:51] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:51 start_atlas.sh
[2025-10-13 03:11:51] drwxrwx--x. 2 boinc boinc        68 Oct 13 01:51 shared
[2025-10-13 03:11:51] -rw-r--r--. 2 boinc boinc    569673 Oct 13 01:51 input.tar.gz
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc         0 Oct 13 01:51 boinc_lockfile
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc      2550 Oct 13 01:51 pandaJob.out
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc    975603 Oct 13 01:51 agis_schedconf.cvmfs.json
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc   1560580 Oct 13 01:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:11:51] drwx------. 5 boinc boinc      4096 Oct 13 01:51 pilot3
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc       529 Oct 13 03:10 boinc_task_state.xml
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc 196678783 Oct 13 03:10 HITS.46676269._079755.pool.root.1
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc      1027 Oct 13 03:10 memory_monitor_summary.json
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc    329572 Oct 13 03:10 log.46676269._079755.job.log.tgz.1
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc      7774 Oct 13 03:10 heartbeat.json
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc        95 Oct 13 03:11 pilot_heartbeat.json
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc      8192 Oct 13 03:11 boinc_mmap_file
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc        27 Oct 13 03:11 wrapper_checkpoint.txt
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc      4936 Oct 13 03:11 pilotlog.txt
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc    697312 Oct 13 03:11 log.46676269._079755.job.log.1
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc       357 Oct 13 03:11 output.list
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc       620 Oct 13 03:11 runtime_log
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc   1044480 Oct 13 03:11 result.tar.gz
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc      8730 Oct 13 03:11 runtime_log.err
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc       651 Oct 13 03:11 6uYMDmTZBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm70TMDmDPfzRn.diag
[2025-10-13 03:11:51] -rw-r--r--. 1 boinc boinc     22143 Oct 13 03:11 stderr.txt
[2025-10-13 03:11:51] HITS file was successfully produced:
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc 196678783 Oct 13 03:10 shared/HITS.pool.root.1
[2025-10-13 03:11:51]  *** Contents of shared directory: ***
[2025-10-13 03:11:51] total 406768
[2025-10-13 03:11:51] -rw-r--r--. 2 boinc boinc 218213812 Oct 13 01:51 ATLAS.root_0
[2025-10-13 03:11:51] -rw-r--r--. 2 boinc boinc     15120 Oct 13 01:51 start_atlas.sh
[2025-10-13 03:11:51] -rw-r--r--. 2 boinc boinc    569673 Oct 13 01:51 input.tar.gz
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc 196678783 Oct 13 03:10 HITS.pool.root.1
[2025-10-13 03:11:51] -rw-------. 1 boinc boinc   1044480 Oct 13 03:11 result.tar.gz
03:11:53 (3265406): run_atlas exited; CPU time 36047.516199
03:11:53 (3265406): called boinc_finish(0)

</stderr_txt>
]]>

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