Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:01:14 (11114): wrapper (7.7.26015): starting
13:01:14 (11114): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 13:01:14] Arguments: --nthreads 12
[2025-10-12 13:01:14] Threads: 12
[2025-10-12 13:01:14] Checking for CVMFS
[2025-10-12 13:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:01:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:01:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:01:14] 2.11.2.0 2949 223155 97728 151627 1 57 19672445 20275201 1 130560 1 108802028 99.984 12372056 12089 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:01:14] CVMFS is ok
[2025-10-12 13:01:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:01:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:01:14] Further information can be found at the LHC@home message board.
[2025-10-12 13:01:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:01:14] Checking for apptainer binary...
[2025-10-12 13:01:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:01:14] Running /usr/bin/apptainer --version
[2025-10-12 13:01:14] apptainer version 1.3.2-1.el7
[2025-10-12 13:01:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:01:16] c-205-13.aglt2.org
[2025-10-12 13:01:16] apptainer works
[2025-10-12 13:01:16] Set ATHENA_PROC_NUMBER=12
[2025-10-12 13:01:16] Set ATHENA_CORE_NUMBER=12
[2025-10-12 13:01:16] Starting ATLAS job with PandaID=6839989448
[2025-10-12 13:01:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:14:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:14:43] 2025-10-12 18:13:59,595 | INFO     | summary of transferred files:
[2025-10-12 14:14:43] 2025-10-12 18:13:59,595 | INFO     |  -- lfn=log.46676269._078821.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 14:14:43] 2025-10-12 18:13:59,595 | INFO     | stage-out finished correctly
[2025-10-12 14:14:43] 2025-10-12 18:13:59,681 | WARNING  | process 21274 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 14:14:43] 2025-10-12 18:13:59,681 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839989448/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:14:43] 2025-10-12 18:13:59,682 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839989448/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:14:43] 2025-10-12 18:13:59,682 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-12 14:14:43] 2025-10-12 18:13:59,682 | WARNING  | maxPSS not found in memory monitor output
[2025-10-12 14:14:43] 2025-10-12 18:13:59,683 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4321853 B
[2025-10-12 14:14:43] 2025-10-12 18:13:59,683 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16263 B
[2025-10-12 14:14:43] 2025-10-12 18:13:59,683 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:14:43] 2025-10-12 18:13:59,700 | INFO     | sufficient remaining disk space (29359079424 B)
[2025-10-12 14:14:43] 2025-10-12 18:13:59,700 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 14:14:43] 2025-10-12 18:13:59,701 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6839989448: 4620034 B (within 2537553920 B limit)
[2025-10-12 14:14:43] 2025-10-12 18:13:59,702 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6839989448/HITS.46676269._078821.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 14:14:43] 2025-10-12 18:13:59,702 | INFO     | total size of present files: 0 B (workdir size: 4620034 B)
[2025-10-12 14:14:43] 2025-10-12 18:13:59,702 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6839989448/HITS.46676269._078821.pool.root.1 since it does not exist
[2025-10-12 14:14:43] 2025-10-12 18:13:59,794 | INFO     | number of running child processes to parent process 21274: 1
[2025-10-12 14:14:43] 2025-10-12 18:13:59,794 | INFO     | maximum number of monitored processes: 6
[2025-10-12 14:14:43] 2025-10-12 18:13:59,840 | INFO     | time since job start (4349s) is within the limit (172800.0s)
[2025-10-12 14:14:43] 2025-10-12 18:14:00,594 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:14:43] 2025-10-12 18:14:01,116 | INFO     | job 6839989448 has state=finished
[2025-10-12 14:14:43] 2025-10-12 18:14:01,116 | INFO     | preparing for final server update for job 6839989448 in state='finished'
[2025-10-12 14:14:43] 2025-10-12 18:14:01,117 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:14:43] 2025-10-12 18:14:01,117 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:14:43] 2025-10-12 18:14:01,117 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:14:43] 2025-10-12 18:14:01,117 | INFO     | job 6839989448 has finished - writing final server update
[2025-10-12 14:14:43] 2025-10-12 18:14:01,118 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:14:43] 2025-10-12 18:14:01,119 | INFO     | executing command: lscpu
[2025-10-12 14:14:43] 2025-10-12 18:14:01,144 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:14:43] 2025-10-12 18:14:01,845 | INFO     | time since job start (4351s) is within the limit (172800.0s)
[2025-10-12 14:14:43] 2025-10-12 18:14:02,297 | INFO     | monitor loop #324: job 0:6839989448 is in state 'finished'
[2025-10-12 14:14:43] 2025-10-12 18:14:02,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:14:43] 2025-10-12 18:14:03,851 | INFO     | time since job start (4353s) is within the limit (172800.0s)
[2025-10-12 14:14:43] 2025-10-12 18:14:04,801 | INFO     | monitor loop #325: job 0:6839989448 is in state 'finished'
[2025-10-12 14:14:43] 2025-10-12 18:14:04,801 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:14:43] 2025-10-12 18:14:05,856 | INFO     | time since job start (4355s) is within the limit (172800.0s)
[2025-10-12 14:14:43] 2025-10-12 18:14:05,894 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 14:14:43] 2025-10-12 18:14:05,898 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 14:14:43] 2025-10-12 18:14:05,900 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839989448/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:14:43] 2025-10-12 18:14:05,900 | INFO     | extracted standard info from prmon json
[2025-10-12 14:14:43] 2025-10-12 18:14:05,901 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:14:43] 2025-10-12 18:14:05,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:14:43] 2025-10-12 18:14:05,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:14:43] 2025-10-12 18:14:05,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:14:43] 2025-10-12 18:14:05,902 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:14:43] 2025-10-12 18:14:05,903 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 14:14:43] 2025-10-12 18:14:05,903 | INFO     | sum of deviations: -2446535418.0
[2025-10-12 14:14:43] 2025-10-12 18:14:05,903 | INFO     | mean x: 1760290745.5
[2025-10-12 14:14:43] 2025-10-12 18:14:05,903 | INFO     | mean y: 2698778.4375
[2025-10-12 14:14:43] 2025-10-12 18:14:05,903 | INFO     | -- intersect: 52996321436.43559
[2025-10-12 14:14:43] 2025-10-12 18:14:05,904 | INFO     | intersect: 52996321436.43559
[2025-10-12 14:14:43] 2025-10-12 18:14:05,904 | INFO     | chi2: 0.04754890340234006
[2025-10-12 14:14:43] 2025-10-12 18:14:05,904 | INFO     | -- intersect: 52996321436.43559
[2025-10-12 14:14:43] 2025-10-12 18:14:05,904 | INFO     | current memory leak: -30.11 B/s (using 64 data points, chi2=0.05)
[2025-10-12 14:14:43] 2025-10-12 18:14:05,904 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-12 14:14:43] 2025-10-12 18:14:05,904 | INFO     | ..............................
[2025-10-12 14:14:43] 2025-10-12 18:14:05,905 | INFO     | . Timing measurements:
[2025-10-12 14:14:43] 2025-10-12 18:14:05,905 | INFO     | . get job = 0 s
[2025-10-12 14:14:43] 2025-10-12 18:14:05,905 | INFO     | . initial setup = 2 s
[2025-10-12 14:14:43] 2025-10-12 18:14:05,905 | INFO     | . payload setup = 7 s
[2025-10-12 14:14:43] 2025-10-12 18:14:05,905 | INFO     | . stage-in = 0 s
[2025-10-12 14:14:43] 2025-10-12 18:14:05,905 | INFO     | . payload execution = 4321 s
[2025-10-12 14:14:43] 2025-10-12 18:14:05,905 | INFO     | . stage-out = 0 s
[2025-10-12 14:14:43] 2025-10-12 18:14:05,905 | INFO     | . log creation = 0 s
[2025-10-12 14:14:43] 2025-10-12 18:14:05,905 | INFO     | ..............................
[2025-10-12 14:14:43] 2025-10-12 18:14:05,986 | INFO     | 
[2025-10-12 14:14:43] 2025-10-12 18:14:05,986 | INFO     | job summary report
[2025-10-12 14:14:43] 2025-10-12 18:14:05,987 | INFO     | --------------------------------------------------
[2025-10-12 14:14:43] 2025-10-12 18:14:05,987 | INFO     | PanDA job id: 6839989448
[2025-10-12 14:14:43] 2025-10-12 18:14:05,987 | INFO     | task id: 46676269
[2025-10-12 14:14:43] 2025-10-12 18:14:05,987 | INFO     | errors: (none)
[2025-10-12 14:14:43] 2025-10-12 18:14:05,987 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:14:43] 2025-10-12 18:14:05,987 | INFO     | pilot state: finished 
[2025-10-12 14:14:43] 2025-10-12 18:14:05,988 | INFO     | transexitcode: 0
[2025-10-12 14:14:43] 2025-10-12 18:14:05,988 | INFO     | exeerrorcode: 0
[2025-10-12 14:14:43] 2025-10-12 18:14:05,988 | INFO     | exeerrordiag: 
[2025-10-12 14:14:43] 2025-10-12 18:14:05,988 | INFO     | exitcode: 0
[2025-10-12 14:14:43] 2025-10-12 18:14:05,988 | INFO     | exitmsg: OK
[2025-10-12 14:14:43] 2025-10-12 18:14:05,988 | INFO     | cpuconsumptiontime: 46448 s
[2025-10-12 14:14:43] 2025-10-12 18:14:05,989 | INFO     | nevents: 400
[2025-10-12 14:14:43] 2025-10-12 18:14:05,989 | INFO     | neventsw: 0
[2025-10-12 14:14:43] 2025-10-12 18:14:05,989 | INFO     | pid: 21274
[2025-10-12 14:14:43] 2025-10-12 18:14:05,989 | INFO     | pgrp: 21274
[2025-10-12 14:14:43] 2025-10-12 18:14:05,989 | INFO     | corecount: 12
[2025-10-12 14:14:43] 2025-10-12 18:14:05,989 | INFO     | event service: False
[2025-10-12 14:14:43] 2025-10-12 18:14:05,989 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 4332: 2375224, 4333: 2384222, 4334: 2384434, 4339: 2384628}
[2025-10-12 14:14:43] 2025-10-12 18:14:05,989 | INFO     | --------------------------------------------------
[2025-10-12 14:14:43] 2025-10-12 18:14:05,989 | INFO     | 
[2025-10-12 14:14:43] 2025-10-12 18:14:05,990 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:14:43] 2025-10-12 18:14:06,013 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,013 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,013 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,013 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,013 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:14:43] 2025-10-12 18:14:06,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,016 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:14:43] 2025-10-12 18:14:06,016 | INFO     | job 6839989448 has completed (purged errors)
[2025-10-12 14:14:43] 2025-10-12 18:14:06,016 | INFO     | overall cleanup function is called
[2025-10-12 14:14:43] 2025-10-12 18:14:07,023 | INFO     | --- collectZombieJob: --- 10, [21274]
[2025-10-12 14:14:43] 2025-10-12 18:14:07,023 | INFO     | zombie collector waiting for pid 21274
[2025-10-12 14:14:43] 2025-10-12 18:14:07,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:14:43] 2025-10-12 18:14:07,023 | INFO     | collected zombie processes
[2025-10-12 14:14:43] 2025-10-12 18:14:07,023 | INFO     | will attempt to kill all subprocesses of pid=21274
[2025-10-12 14:14:43] 2025-10-12 18:14:07,113 | INFO     | process IDs to be killed: [21274] (in reverse order)
[2025-10-12 14:14:43] 2025-10-12 18:14:07,163 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:14:43] 2025-10-12 18:14:07,164 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:14:43] 2025-10-12 18:14:07,166 | INFO     | did not find any defunct processes belonging to 21274
[2025-10-12 14:14:43] 2025-10-12 18:14:07,169 | INFO     | did not find any defunct processes belonging to 21274
[2025-10-12 14:14:43] 2025-10-12 18:14:07,169 | INFO     | ready for new job
[2025-10-12 14:14:43] 2025-10-12 18:14:07,169 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:14:43] 2025-10-12 18:14:07,170 | INFO     | ***************************************
[2025-10-12 14:14:43] 2025-10-12 18:14:07,171 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:14:43] 2025-10-12 18:14:07,171 | INFO     | ***************************************
[2025-10-12 14:14:43] 2025-10-12 18:14:07,171 | INFO     | 
[2025-10-12 14:14:43] 2025-10-12 18:14:07,171 | INFO     | architecture information:
[2025-10-12 14:14:43] 2025-10-12 18:14:07,172 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:14:43] 2025-10-12 18:14:07,186 | INFO     | cat /etc/os-release:
[2025-10-12 14:14:43] NAME="CentOS Linux"
[2025-10-12 14:14:43] VERSION="7 (Core)"
[2025-10-12 14:14:43] ID="centos"
[2025-10-12 14:14:43] ID_LIKE="rhel fedora"
[2025-10-12 14:14:43] VERSION_ID="7"
[2025-10-12 14:14:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:14:43] ANSI_COLOR="0;31"
[2025-10-12 14:14:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:14:43] HOME_URL="https://www.centos.org/"
[2025-10-12 14:14:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:14:43] 
[2025-10-12 14:14:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:14:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:14:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:14:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:14:43] 
[2025-10-12 14:14:43] 2025-10-12 18:14:07,186 | INFO     | ***************************************
[2025-10-12 14:14:43] 2025-10-12 18:14:07,689 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:14:43] 2025-10-12 18:14:07,705 | INFO     | sufficient remaining disk space (29364322304 B)
[2025-10-12 14:14:43] 2025-10-12 18:14:07,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:14:43] 2025-10-12 18:14:07,706 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:14:43] 2025-10-12 18:14:07,706 | INFO     | update_server=False
[2025-10-12 14:14:43] 2025-10-12 18:14:07,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:14:43] 2025-10-12 18:14:07,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:14:43] 2025-10-12 18:14:07,706 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 14:14:43] 2025-10-12 18:14:07,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:14:43] 2025-10-12 18:14:07,707 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:14:43] 2025-10-12 18:14:07,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:14:43] 2025-10-12 18:14:07,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:14:43] 2025-10-12 18:14:08,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:14:43] 2025-10-12 18:14:08,308 | INFO     | aborting loop
[2025-10-12 14:14:43] 2025-10-12 18:14:08,352 | INFO     | all data control threads have been joined
[2025-10-12 14:14:43] 2025-10-12 18:14:08,707 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:08,713 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:08,760 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:08,942 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:08,987 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:09,185 | INFO     | all payload control threads have been joined
[2025-10-12 14:14:43] 2025-10-12 18:14:09,188 | INFO     | all job control threads have been joined
[2025-10-12 14:14:43] 2025-10-12 18:14:09,313 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:09,357 | INFO     | [data] control thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:09,424 | INFO     | [job] validate thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:09,443 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:09,598 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:09,693 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:09,712 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:09,876 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:10,191 | INFO     | [payload] control thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:10,193 | INFO     | [job] control thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:11,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:14:43] 2025-10-12 18:14:15,191 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:14:43] 2025-10-12 18:14:37,173 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:14:43] 2025-10-12 18:14:37,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080033572672)>', '<ExcThread(monitor, started 140079049717504)>']
[2025-10-12 14:14:43] 2025-10-12 18:14:37,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:14:43] 2025-10-12 18:14:37,857 | INFO     | [monitor] control thread has ended
[2025-10-12 14:14:43] 2025-10-12 18:14:42,859 | INFO     | all workflow threads have been joined
[2025-10-12 14:14:43] 2025-10-12 18:14:42,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:14:43] 2025-10-12 18:14:42,862 | INFO     | traces error code: 0
[2025-10-12 14:14:43] 2025-10-12 18:14:42,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:14:43] 2025-10-12 18:14:42,964 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:14:43] 2025-10-12 18:14:42,968 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:14:43] 2025-10-12 18:14:42,971 [wrapper] pilotpid: 14793
[2025-10-12 14:14:43] 2025-10-12 18:14:42,975 [wrapper] Pilot exit status: 0
[2025-10-12 14:14:43] 2025-10-12 18:14:42,991 [wrapper] pandaids: 6839989448
[2025-10-12 14:14:43] 2025-10-12 18:14:43,028 [wrapper] cleanup supervisor_pilot  2232 14794
[2025-10-12 14:14:43] 2025-10-12 18:14:43,033 [wrapper] Test setup, not cleaning
[2025-10-12 14:14:43] 2025-10-12 18:14:43,037 [wrapper] apfmon messages muted
[2025-10-12 14:14:43] 2025-10-12 18:14:43,041 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:14:43] 2025-10-12 18:14:43,045 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:14:43]  *** Error codes and diagnostics ***
[2025-10-12 14:14:43]     "exeErrorCode": 0,
[2025-10-12 14:14:43]     "exeErrorDiag": "",
[2025-10-12 14:14:43]     "pilotErrorCode": 0,
[2025-10-12 14:14:43]     "pilotErrorDiag": "",
[2025-10-12 14:14:43]  *** Listing of results directory ***
[2025-10-12 14:14:43] total 410904
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 08:35 pilot3.tar.gz
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 08:51 queuedata.json
[2025-10-12 14:14:43] -rwx------ 1 boincer umatlas     36292 Oct 12 08:51 runpilot2-wrapper.sh
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas       100 Oct 12 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:14:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 13:01 run_atlas
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas       105 Oct 12 13:01 job.xml
[2025-10-12 14:14:43] -rw-r--r-- 2 boincer umatlas 220908457 Oct 12 13:01 EVNT.46676267._003832.pool.root.1
[2025-10-12 14:14:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:01 start_atlas.sh
[2025-10-12 14:14:43] drwxrwx--x 2 boincer umatlas      4096 Oct 12 13:01 shared
[2025-10-12 14:14:43] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 13:01 input.tar.gz
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas         0 Oct 12 13:01 boinc_lockfile
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 13:01 pandaJob.out
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas    975528 Oct 12 13:01 agis_schedconf.cvmfs.json
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas   1560580 Oct 12 13:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:14:43] drwx------ 5 boincer umatlas      4096 Oct 12 13:01 pilot3
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 14:12 init_data.xml
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas        95 Oct 12 14:13 pilot_heartbeat.json
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas 193922224 Oct 12 14:13 HITS.46676269._078821.pool.root.1
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas      1050 Oct 12 14:13 memory_monitor_summary.json
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas    385013 Oct 12 14:13 log.46676269._078821.job.log.tgz.1
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas       529 Oct 12 14:14 boinc_task_state.xml
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas      7851 Oct 12 14:14 heartbeat.json
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:14 boinc_mmap_file
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas        27 Oct 12 14:14 wrapper_checkpoint.txt
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas      4552 Oct 12 14:14 pilotlog.txt
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas    634338 Oct 12 14:14 log.46676269._078821.job.log.1
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas       357 Oct 12 14:14 output.list
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:14 runtime_log
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas   1034240 Oct 12 14:14 result.tar.gz
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas       659 Oct 12 14:14 s5wLDmEjAS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmRvTMDmUKjQRm.diag
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 14:14 runtime_log.err
[2025-10-12 14:14:43] -rw-r--r-- 1 boincer umatlas     22295 Oct 12 14:14 stderr.txt
[2025-10-12 14:14:43] HITS file was successfully produced:
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas 193922224 Oct 12 14:13 shared/HITS.pool.root.1
[2025-10-12 14:14:43]  *** Contents of shared directory: ***
[2025-10-12 14:14:43] total 406704
[2025-10-12 14:14:43] -rw-r--r-- 2 boincer umatlas 220908457 Oct 12 13:01 ATLAS.root_0
[2025-10-12 14:14:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 13:01 start_atlas.sh
[2025-10-12 14:14:43] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 13:01 input.tar.gz
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas 193922224 Oct 12 14:13 HITS.pool.root.1
[2025-10-12 14:14:43] -rw------- 1 boincer umatlas   1034240 Oct 12 14:14 result.tar.gz
14:14:44 (11114): run_atlas exited; CPU time 46422.157297
14:14:44 (11114): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN