Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:57:42 (23860): wrapper (7.7.26015): starting
12:57:42 (23860): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 12:57:42] Arguments: --nthreads 12
[2025-10-12 12:57:42] Threads: 12
[2025-10-12 12:57:42] Checking for CVMFS
[2025-10-12 12:57:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:57:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:57:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:57:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:57:43] 2.11.2.0 2914 223151 98448 151627 0 57 15858244 20275200 1 130560 1 108742978 99.983 13263567 12352 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 12:57:43] CVMFS is ok
[2025-10-12 12:57:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:57:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:57:43] Further information can be found at the LHC@home message board.
[2025-10-12 12:57:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:57:43] Checking for apptainer binary...
[2025-10-12 12:57:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 12:57:43] Running /usr/bin/apptainer --version
[2025-10-12 12:57:43] apptainer version 1.3.2-1.el7
[2025-10-12 12:57:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:57:44] c-205-5.aglt2.org
[2025-10-12 12:57:44] apptainer works
[2025-10-12 12:57:44] Set ATHENA_PROC_NUMBER=12
[2025-10-12 12:57:44] Set ATHENA_CORE_NUMBER=12
[2025-10-12 12:57:44] Starting ATLAS job with PandaID=6840081612
[2025-10-12 12:57:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:13:35]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:13:35]  lfn=log.46676269._079767.job.log.tgz.1
[2025-10-12 14:13:35]  mtime=0
[2025-10-12 14:13:35]  protocol_id=None
[2025-10-12 14:13:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 14:13:35]  replicas=None
[2025-10-12 14:13:35]  scope=mc23_13p6TeV
[2025-10-12 14:13:35]  status=None
[2025-10-12 14:13:35]  status_code=0
[2025-10-12 14:13:35]  storage_token=
[2025-10-12 14:13:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840081612/log.46676269._079767.job.log.tgz.1
[2025-10-12 14:13:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/7c/log.46676269._079767.job.log.tgz.1
[2025-10-12 14:13:35]  workdir=None
[2025-10-12 14:13:35] ]
[2025-10-12 14:13:35] 2025-10-12 18:12:58,202 | INFO     | transferring file log.46676269._079767.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840081612/log.46676269._079767.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 14:13:35] 2025-10-12 18:12:58,202 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840081612/log.46676269._079767.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._079767.job
[2025-10-12 14:13:35] 2025-10-12 18:12:58,232 | INFO     | adding to output.list: log.46676269._079767.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/7c/log.46676269._079767.job.log.tg
[2025-10-12 14:13:35] 2025-10-12 18:12:58,233 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 14:13:35] 2025-10-12 18:12:58,233 | INFO     | summary of transferred files:
[2025-10-12 14:13:35] 2025-10-12 18:12:58,233 | INFO     |  -- lfn=log.46676269._079767.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 14:13:35] 2025-10-12 18:12:58,233 | INFO     | stage-out finished correctly
[2025-10-12 14:13:35] 2025-10-12 18:12:58,344 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:13:35] 2025-10-12 18:12:58,625 | INFO     | job 6840081612 has state=finished
[2025-10-12 14:13:35] 2025-10-12 18:12:58,625 | INFO     | preparing for final server update for job 6840081612 in state='finished'
[2025-10-12 14:13:35] 2025-10-12 18:12:58,625 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:13:35] 2025-10-12 18:12:58,626 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:13:35] 2025-10-12 18:12:58,626 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:13:35] 2025-10-12 18:12:58,626 | INFO     | job 6840081612 has finished - writing final server update
[2025-10-12 14:13:35] 2025-10-12 18:12:58,626 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:13:35] 2025-10-12 18:12:58,627 | INFO     | executing command: lscpu
[2025-10-12 14:13:35] 2025-10-12 18:12:58,653 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:13:35] 2025-10-12 18:12:59,165 | INFO     | monitor loop #335: job 0:6840081612 is in state 'finished'
[2025-10-12 14:13:35] 2025-10-12 18:12:59,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:13:35] 2025-10-12 18:12:59,795 | INFO     | time since job start (4500s) is within the limit (172800.0s)
[2025-10-12 14:13:35] 2025-10-12 18:13:01,668 | INFO     | monitor loop #336: job 0:6840081612 is in state 'finished'
[2025-10-12 14:13:35] 2025-10-12 18:13:01,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:13:35] 2025-10-12 18:13:01,800 | INFO     | time since job start (4502s) is within the limit (172800.0s)
[2025-10-12 14:13:35] 2025-10-12 18:13:01,800 | INFO     | 4504s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 14:13:35] 2025-10-12 18:13:03,546 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 14:13:35] 2025-10-12 18:13:03,550 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1673.5833333333333
[2025-10-12 14:13:35] 2025-10-12 18:13:03,552 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840081612/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:13:35] 2025-10-12 18:13:03,553 | INFO     | extracted standard info from prmon json
[2025-10-12 14:13:35] 2025-10-12 18:13:03,553 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:13:35] 2025-10-12 18:13:03,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:13:35] 2025-10-12 18:13:03,553 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:13:35] 2025-10-12 18:13:03,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:13:35] 2025-10-12 18:13:03,556 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:13:35] 2025-10-12 18:13:03,556 | INFO     | sum of square deviations: 93240818.0
[2025-10-12 14:13:35] 2025-10-12 18:13:03,556 | INFO     | sum of deviations: -4091992484.0000005
[2025-10-12 14:13:35] 2025-10-12 18:13:03,556 | INFO     | mean x: 1760290627.0
[2025-10-12 14:13:35] 2025-10-12 18:13:03,557 | INFO     | mean y: 2710387.1791044776
[2025-10-12 14:13:35] 2025-10-12 18:13:03,557 | INFO     | -- intersect: 77255314663.34117
[2025-10-12 14:13:35] 2025-10-12 18:13:03,557 | INFO     | intersect: 77255314663.34117
[2025-10-12 14:13:35] 2025-10-12 18:13:03,557 | INFO     | chi2: 0.05459924090968591
[2025-10-12 14:13:35] 2025-10-12 18:13:03,557 | INFO     | -- intersect: 77255314663.34117
[2025-10-12 14:13:35] 2025-10-12 18:13:03,558 | INFO     | current memory leak: -43.89 B/s (using 67 data points, chi2=0.05)
[2025-10-12 14:13:35] 2025-10-12 18:13:03,558 | INFO     | could have reported an average CPU frequency of 2019 MHz (6 samples)
[2025-10-12 14:13:35] 2025-10-12 18:13:03,558 | INFO     | ..............................
[2025-10-12 14:13:35] 2025-10-12 18:13:03,558 | INFO     | . Timing measurements:
[2025-10-12 14:13:35] 2025-10-12 18:13:03,558 | INFO     | . get job = 0 s
[2025-10-12 14:13:35] 2025-10-12 18:13:03,558 | INFO     | . initial setup = 2 s
[2025-10-12 14:13:35] 2025-10-12 18:13:03,559 | INFO     | . payload setup = 7 s
[2025-10-12 14:13:35] 2025-10-12 18:13:03,559 | INFO     | . stage-in = 0 s
[2025-10-12 14:13:35] 2025-10-12 18:13:03,559 | INFO     | . payload execution = 4469 s
[2025-10-12 14:13:35] 2025-10-12 18:13:03,559 | INFO     | . stage-out = 0 s
[2025-10-12 14:13:35] 2025-10-12 18:13:03,559 | INFO     | . log creation = 0 s
[2025-10-12 14:13:35] 2025-10-12 18:13:03,559 | INFO     | ..............................
[2025-10-12 14:13:35] 2025-10-12 18:13:03,641 | INFO     | 
[2025-10-12 14:13:35] 2025-10-12 18:13:03,641 | INFO     | job summary report
[2025-10-12 14:13:35] 2025-10-12 18:13:03,642 | INFO     | --------------------------------------------------
[2025-10-12 14:13:35] 2025-10-12 18:13:03,642 | INFO     | PanDA job id: 6840081612
[2025-10-12 14:13:35] 2025-10-12 18:13:03,642 | INFO     | task id: 46676269
[2025-10-12 14:13:35] 2025-10-12 18:13:03,642 | INFO     | errors: (none)
[2025-10-12 14:13:35] 2025-10-12 18:13:03,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:13:35] 2025-10-12 18:13:03,642 | INFO     | pilot state: finished 
[2025-10-12 14:13:35] 2025-10-12 18:13:03,643 | INFO     | transexitcode: 0
[2025-10-12 14:13:35] 2025-10-12 18:13:03,643 | INFO     | exeerrorcode: 0
[2025-10-12 14:13:35] 2025-10-12 18:13:03,643 | INFO     | exeerrordiag: 
[2025-10-12 14:13:35] 2025-10-12 18:13:03,643 | INFO     | exitcode: 0
[2025-10-12 14:13:35] 2025-10-12 18:13:03,643 | INFO     | exitmsg: OK
[2025-10-12 14:13:35] 2025-10-12 18:13:03,643 | INFO     | cpuconsumptiontime: 46878 s
[2025-10-12 14:13:35] 2025-10-12 18:13:03,644 | INFO     | nevents: 400
[2025-10-12 14:13:35] 2025-10-12 18:13:03,644 | INFO     | neventsw: 0
[2025-10-12 14:13:35] 2025-10-12 18:13:03,644 | INFO     | pid: 1535
[2025-10-12 14:13:35] 2025-10-12 18:13:03,644 | INFO     | pgrp: 1535
[2025-10-12 14:13:35] 2025-10-12 18:13:03,644 | INFO     | corecount: 12
[2025-10-12 14:13:35] 2025-10-12 18:13:03,644 | INFO     | event service: False
[2025-10-12 14:13:35] 2025-10-12 18:13:03,644 | INFO     | sizes: {0: 2348635, 1: 2348834, 6: 2349096, 11: 2349124, 4480: 2375228, 4481: 2375227, 4482: 2384409, 4483: 2384465, 4488: 2384659}
[2025-10-12 14:13:35] 2025-10-12 18:13:03,645 | INFO     | --------------------------------------------------
[2025-10-12 14:13:35] 2025-10-12 18:13:03,645 | INFO     | 
[2025-10-12 14:13:35] 2025-10-12 18:13:03,645 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:13:35] 2025-10-12 18:13:03,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,674 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,674 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:13:35] 2025-10-12 18:13:03,674 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,674 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:13:35] 2025-10-12 18:13:03,674 | INFO     | job 6840081612 has completed (purged errors)
[2025-10-12 14:13:35] 2025-10-12 18:13:03,675 | INFO     | overall cleanup function is called
[2025-10-12 14:13:35] 2025-10-12 18:13:04,683 | INFO     | --- collectZombieJob: --- 10, [1535]
[2025-10-12 14:13:35] 2025-10-12 18:13:04,683 | INFO     | zombie collector waiting for pid 1535
[2025-10-12 14:13:35] 2025-10-12 18:13:04,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:13:35] 2025-10-12 18:13:04,683 | INFO     | collected zombie processes
[2025-10-12 14:13:35] 2025-10-12 18:13:04,684 | INFO     | will attempt to kill all subprocesses of pid=1535
[2025-10-12 14:13:35] 2025-10-12 18:13:04,775 | INFO     | process IDs to be killed: [1535] (in reverse order)
[2025-10-12 14:13:35] 2025-10-12 18:13:04,828 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:13:35] 2025-10-12 18:13:04,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:13:35] 2025-10-12 18:13:04,833 | INFO     | did not find any defunct processes belonging to 1535
[2025-10-12 14:13:35] 2025-10-12 18:13:04,836 | INFO     | did not find any defunct processes belonging to 1535
[2025-10-12 14:13:35] 2025-10-12 18:13:04,836 | INFO     | ready for new job
[2025-10-12 14:13:35] 2025-10-12 18:13:04,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:13:35] 2025-10-12 18:13:04,838 | INFO     | ***************************************
[2025-10-12 14:13:35] 2025-10-12 18:13:04,838 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:13:35] 2025-10-12 18:13:04,838 | INFO     | ***************************************
[2025-10-12 14:13:35] 2025-10-12 18:13:04,838 | INFO     | 
[2025-10-12 14:13:35] 2025-10-12 18:13:04,839 | INFO     | architecture information:
[2025-10-12 14:13:35] 2025-10-12 18:13:04,839 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:13:35] 2025-10-12 18:13:04,853 | INFO     | cat /etc/os-release:
[2025-10-12 14:13:35] NAME="CentOS Linux"
[2025-10-12 14:13:35] VERSION="7 (Core)"
[2025-10-12 14:13:35] ID="centos"
[2025-10-12 14:13:35] ID_LIKE="rhel fedora"
[2025-10-12 14:13:35] VERSION_ID="7"
[2025-10-12 14:13:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:13:35] ANSI_COLOR="0;31"
[2025-10-12 14:13:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:13:35] HOME_URL="https://www.centos.org/"
[2025-10-12 14:13:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:13:35] 
[2025-10-12 14:13:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:13:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:13:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:13:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:13:35] 
[2025-10-12 14:13:35] 2025-10-12 18:13:04,854 | INFO     | ***************************************
[2025-10-12 14:13:35] 2025-10-12 18:13:05,357 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:13:35] 2025-10-12 18:13:05,373 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-10-12 14:13:35] 2025-10-12 18:13:05,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:13:35] 2025-10-12 18:13:05,374 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:13:35] 2025-10-12 18:13:05,374 | INFO     | update_server=False
[2025-10-12 14:13:35] 2025-10-12 18:13:05,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:13:35] 2025-10-12 18:13:05,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:13:35] 2025-10-12 18:13:05,375 | INFO     | aborting loop
[2025-10-12 14:13:35] 2025-10-12 18:13:05,375 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:13:35] 2025-10-12 18:13:05,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:13:35] 2025-10-12 18:13:06,223 | INFO     | all data control threads have been joined
[2025-10-12 14:13:35] 2025-10-12 18:13:06,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:13:35] 2025-10-12 18:13:06,380 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:06,380 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:06,380 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:06,423 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:06,450 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:06,468 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:13:35] 2025-10-12 18:13:06,605 | INFO     | all job control threads have been joined
[2025-10-12 14:13:35] 2025-10-12 18:13:06,676 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:06,845 | INFO     | all payload control threads have been joined
[2025-10-12 14:13:35] 2025-10-12 18:13:07,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:07,110 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:07,177 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:07,228 | INFO     | [data] control thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:07,262 | INFO     | [job] validate thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:07,610 | INFO     | [job] control thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:07,677 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:07,850 | INFO     | [payload] control thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:08,333 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:09,381 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:13:35] 2025-10-12 18:13:10,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706704267072)>', '<ExcThread(monitor, started 140706106550016)>']
[2025-10-12 14:13:35] 2025-10-12 18:13:15,772 | INFO     | all workflow threads have been joined
[2025-10-12 14:13:35] 2025-10-12 18:13:15,772 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:13:35] 2025-10-12 18:13:15,773 | INFO     | traces error code: 0
[2025-10-12 14:13:35] 2025-10-12 18:13:15,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:13:35] 2025-10-12 18:13:35,008 | INFO     | PID=27549 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 14:13:35] 2025-10-12 18:13:35,008 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:13:35] 2025-10-12 18:13:35,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:13:35] 2025-10-12 18:13:35,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:13:35] 2025-10-12 18:13:35,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:13:35] 2025-10-12 18:13:35,009 | INFO     | [monitor] control thread has ended
[2025-10-12 14:13:35] 2025-10-12 18:13:35,090 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:13:35] 2025-10-12 18:13:35,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:13:35] 2025-10-12 18:13:35,099 [wrapper] pilotpid: 27549
[2025-10-12 14:13:35] 2025-10-12 18:13:35,103 [wrapper] Pilot exit status: 0
[2025-10-12 14:13:35] 2025-10-12 18:13:35,120 [wrapper] pandaids: 6840081612
[2025-10-12 14:13:35] 2025-10-12 18:13:35,159 [wrapper] cleanup supervisor_pilot 13943 27550
[2025-10-12 14:13:35] 2025-10-12 18:13:35,163 [wrapper] Test setup, not cleaning
[2025-10-12 14:13:35] 2025-10-12 18:13:35,166 [wrapper] apfmon messages muted
[2025-10-12 14:13:35] 2025-10-12 18:13:35,171 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:13:35] 2025-10-12 18:13:35,175 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:13:35]  *** Error codes and diagnostics ***
[2025-10-12 14:13:35]     "exeErrorCode": 0,
[2025-10-12 14:13:35]     "exeErrorDiag": "",
[2025-10-12 14:13:35]     "pilotErrorCode": 0,
[2025-10-12 14:13:35]     "pilotErrorDiag": "",
[2025-10-12 14:13:35]  *** Listing of results directory ***
[2025-10-12 14:13:35] total 412048
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 09:45 queuedata.json
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 09:45 pilot3.tar.gz
[2025-10-12 14:13:35] -rwx------ 1 boincer umatlas     36292 Oct 12 09:45 runpilot2-wrapper.sh
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas       100 Oct 12 12:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:13:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 12:57 run_atlas
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas       105 Oct 12 12:57 job.xml
[2025-10-12 14:13:35] -rw-r--r-- 2 boincer umatlas 219249616 Oct 12 12:57 EVNT.46676267._004018.pool.root.1
[2025-10-12 14:13:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:57 start_atlas.sh
[2025-10-12 14:13:35] drwxrwx--x 2 boincer umatlas      4096 Oct 12 12:57 shared
[2025-10-12 14:13:35] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 12:57 input.tar.gz
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas         0 Oct 12 12:57 boinc_lockfile
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 12:57 pandaJob.out
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas    975528 Oct 12 12:57 agis_schedconf.cvmfs.json
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas   1560580 Oct 12 12:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:13:35] drwx------ 5 boincer umatlas      4096 Oct 12 12:58 pilot3
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas 196736905 Oct 12 14:12 HITS.46676269._079767.pool.root.1
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas      1048 Oct 12 14:12 memory_monitor_summary.json
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas    371092 Oct 12 14:12 log.46676269._079767.job.log.tgz.1
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas       529 Oct 12 14:12 boinc_task_state.xml
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas        95 Oct 12 14:12 pilot_heartbeat.json
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas      7850 Oct 12 14:13 heartbeat.json
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 14:13 init_data.xml
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 14:13 boinc_mmap_file
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas        27 Oct 12 14:13 wrapper_checkpoint.txt
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas       745 Oct 12 14:13 pilotlog.txt
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas    651951 Oct 12 14:13 log.46676269._079767.job.log.1
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas       357 Oct 12 14:13 output.list
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas       620 Oct 12 14:13 runtime_log
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas   1044480 Oct 12 14:13 result.tar.gz
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas       658 Oct 12 14:13 YL0MDmYZBS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmA5jNDmHLLezn.diag
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 14:13 runtime_log.err
[2025-10-12 14:13:35] -rw-r--r-- 1 boincer umatlas     21668 Oct 12 14:13 stderr.txt
[2025-10-12 14:13:35] HITS file was successfully produced:
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas 196736905 Oct 12 14:12 shared/HITS.pool.root.1
[2025-10-12 14:13:35]  *** Contents of shared directory: ***
[2025-10-12 14:13:35] total 407844
[2025-10-12 14:13:35] -rw-r--r-- 2 boincer umatlas 219249616 Oct 12 12:57 ATLAS.root_0
[2025-10-12 14:13:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 12:57 start_atlas.sh
[2025-10-12 14:13:35] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 12:57 input.tar.gz
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas 196736905 Oct 12 14:12 HITS.pool.root.1
[2025-10-12 14:13:35] -rw------- 1 boincer umatlas   1044480 Oct 12 14:13 result.tar.gz
14:13:37 (23860): run_atlas exited; CPU time 46856.769734
14:13:37 (23860): called boinc_finish(0)

</stderr_txt>
]]>

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