Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:34:21 (17668): wrapper (7.7.26015): starting
03:34:21 (17668): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 03:34:21] Arguments: --nthreads 8
[2025-10-13 03:34:21] Threads: 8
[2025-10-13 03:34:21] Checking for CVMFS
[2025-10-13 03:34:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:34:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:34:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:34:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:34:23] 2.11.2.0 24942 19506 66160 151643 0 61 25145838 25165825 4632 130560 0 5044702 99.944 1646034 1147 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 03:34:23] CVMFS is ok
[2025-10-13 03:34:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:34:23] Checking for apptainer binary...
[2025-10-13 03:34:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:34:23] Running /usr/bin/apptainer --version
[2025-10-13 03:34:23] apptainer version 1.3.2-1.el7
[2025-10-13 03:34:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:34:41] cg-vwn352.simple-grid.lan
[2025-10-13 03:34:41] apptainer works
[2025-10-13 03:34:41] Set ATHENA_PROC_NUMBER=8
[2025-10-13 03:34:41] Set ATHENA_CORE_NUMBER=8
[2025-10-13 03:34:42] Starting ATLAS job with PandaID=6840081072
[2025-10-13 03:34:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:33:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:33:40] 2025-10-13 05:32:38,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:33:40] 2025-10-13 05:32:38,131 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:33:40] 2025-10-13 05:32:38,132 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 07:33:40] 2025-10-13 05:32:38,133 | INFO     | sum of deviations: 64139080221.49997
[2025-10-13 07:33:40] 2025-10-13 05:32:38,134 | INFO     | mean x: 1760326708.5
[2025-10-13 07:33:40] 2025-10-13 05:32:38,134 | INFO     | mean y: 2433412.0495495494
[2025-10-13 07:33:40] 2025-10-13 05:32:38,134 | INFO     | -- intersect: -33277884853.746616
[2025-10-13 07:33:40] 2025-10-13 05:32:38,134 | INFO     | intersect: -33277884853.746616
[2025-10-13 07:33:40] 2025-10-13 05:32:38,134 | INFO     | chi2: 5.26834141680522
[2025-10-13 07:33:40] 2025-10-13 05:32:38,135 | INFO     | sum of square deviations: 3168461268.0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,136 | INFO     | sum of deviations: 77111378986.99995
[2025-10-13 07:33:40] 2025-10-13 05:32:38,137 | INFO     | mean x: 1760326556.0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,137 | INFO     | mean y: 2442057.285714286
[2025-10-13 07:33:40] 2025-10-13 05:32:38,137 | INFO     | -- intersect: -42838923741.16039
[2025-10-13 07:33:40] 2025-10-13 05:32:38,137 | INFO     | intersect: -42838923741.16039
[2025-10-13 07:33:40] 2025-10-13 05:32:38,137 | INFO     | chi2: 4.537881816072741
[2025-10-13 07:33:40] 2025-10-13 05:32:38,137 | INFO     | current chi2=4.537881816072741 (change=13.865077126596653 %)
[2025-10-13 07:33:40] 2025-10-13 05:32:38,138 | INFO     | right removable region: 216
[2025-10-13 07:33:40] 2025-10-13 05:32:38,138 | INFO     | sum of square deviations: 3168461268.0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,140 | INFO     | sum of deviations: -6127881880.000001
[2025-10-13 07:33:40] 2025-10-13 05:32:38,140 | INFO     | mean x: 1760326861.0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,140 | INFO     | mean y: 2481139.6267281105
[2025-10-13 07:33:40] 2025-10-13 05:32:38,140 | INFO     | -- intersect: 3406996505.916249
[2025-10-13 07:33:40] 2025-10-13 05:32:38,140 | INFO     | intersect: 3406996505.916249
[2025-10-13 07:33:40] 2025-10-13 05:32:38,141 | INFO     | chi2: 1.2723144146930463
[2025-10-13 07:33:40] 2025-10-13 05:32:38,141 | INFO     | current chi2=1.2723144146930463 (change=75.84981089808352 %)
[2025-10-13 07:33:40] 2025-10-13 05:32:38,141 | INFO     | sum of square deviations: 2954447953.0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,143 | INFO     | sum of deviations: -22348997732.0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,143 | INFO     | mean x: 1760327013.5
[2025-10-13 07:33:40] 2025-10-13 05:32:38,144 | INFO     | mean y: 2492566.320754717
[2025-10-13 07:33:40] 2025-10-13 05:32:38,144 | INFO     | -- intersect: 13318531656.581835
[2025-10-13 07:33:40] 2025-10-13 05:32:38,144 | INFO     | intersect: 13318531656.581835
[2025-10-13 07:33:40] 2025-10-13 05:32:38,144 | INFO     | chi2: 0.8739255542716953
[2025-10-13 07:33:40] 2025-10-13 05:32:38,144 | INFO     | current chi2=0.8739255542716953 (change=31.312139186717047 %)
[2025-10-13 07:33:40] 2025-10-13 05:32:38,145 | INFO     | sum of square deviations: 2750295288.0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,147 | INFO     | sum of deviations: -17456161502.0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,147 | INFO     | mean x: 1760327166.0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,147 | INFO     | mean y: 2488882.4396135267
[2025-10-13 07:33:40] 2025-10-13 05:32:38,147 | INFO     | -- intersect: 11175309284.717073
[2025-10-13 07:33:40] 2025-10-13 05:32:38,147 | INFO     | intersect: 11175309284.717073
[2025-10-13 07:33:40] 2025-10-13 05:32:38,148 | INFO     | chi2: 0.8516530428372142
[2025-10-13 07:33:40] 2025-10-13 05:32:38,148 | INFO     | current chi2=0.8516530428372142 (change=2.548559351035608 %)
[2025-10-13 07:33:40] 2025-10-13 05:32:38,148 | INFO     | left removable region: 30
[2025-10-13 07:33:40] 2025-10-13 05:32:38,148 | INFO     | sum of square deviations: 1995283922.5
[2025-10-13 07:33:40] 2025-10-13 05:32:38,150 | INFO     | sum of deviations: 3943447876.5000005
[2025-10-13 07:33:40] 2025-10-13 05:32:38,150 | INFO     | mean x: 1760327440.5
[2025-10-13 07:33:40] 2025-10-13 05:32:38,150 | INFO     | mean y: 2493318.14516129
[2025-10-13 07:33:40] 2025-10-13 05:32:38,150 | INFO     | -- intersect: -3476590249.3135977
[2025-10-13 07:33:40] 2025-10-13 05:32:38,150 | INFO     | intersect: -3476590249.3135977
[2025-10-13 07:33:40] 2025-10-13 05:32:38,150 | INFO     | chi2: 0.00044150695300342974
[2025-10-13 07:33:40] 2025-10-13 05:32:38,151 | INFO     | -- intersect: -3476590249.3135977
[2025-10-13 07:33:40] 2025-10-13 05:32:38,151 | INFO     | current memory leak: 1.98 B/s (using 186 data points, chi2=0.00)
[2025-10-13 07:33:40] 2025-10-13 05:32:38,151 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | ..............................
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | . Timing measurements:
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | . get job = 0 s
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | . initial setup = 3 s
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | . payload setup = 138 s
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | . stage-in = 0 s
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | . payload execution = 13645 s
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | . stage-out = 3 s
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | . log creation = 1 s
[2025-10-13 07:33:40] 2025-10-13 05:32:38,152 | INFO     | ..............................
[2025-10-13 07:33:40] 2025-10-13 05:32:38,269 | INFO     | 
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | job summary report
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | --------------------------------------------------
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | PanDA job id: 6840081072
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | task id: 46676269
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | errors: (none)
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | pilot state: finished 
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | transexitcode: 0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | exeerrorcode: 0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,270 | INFO     | exeerrordiag: 
[2025-10-13 07:33:40] 2025-10-13 05:32:38,271 | INFO     | exitcode: 0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,271 | INFO     | exitmsg: OK
[2025-10-13 07:33:40] 2025-10-13 05:32:38,271 | INFO     | cpuconsumptiontime: 51397 s
[2025-10-13 07:33:40] 2025-10-13 05:32:38,271 | INFO     | nevents: 400
[2025-10-13 07:33:40] 2025-10-13 05:32:38,271 | INFO     | neventsw: 0
[2025-10-13 07:33:40] 2025-10-13 05:32:38,271 | INFO     | pid: 28059
[2025-10-13 07:33:40] 2025-10-13 05:32:38,271 | INFO     | pgrp: 28059
[2025-10-13 07:33:40] 2025-10-13 05:32:38,271 | INFO     | corecount: 8
[2025-10-13 07:33:40] 2025-10-13 05:32:38,271 | INFO     | event service: False
[2025-10-13 07:33:40] 2025-10-13 05:32:38,272 | INFO     | sizes: {0: 2348857, 1: 2348857, 12: 2348885, 22: 2348913, 33: 2348941, 44: 2348997, 55: 2349153, 65: 2349181, 76: 2349209, 87: 2349265, 90: 2349555, 97: 2349863, 1
[2025-10-13 07:33:40] 2025-10-13 05:32:38,272 | INFO     | --------------------------------------------------
[2025-10-13 07:33:40] 2025-10-13 05:32:38,272 | INFO     | 
[2025-10-13 07:33:40] 2025-10-13 05:32:38,272 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-10-13 07:33:40] 2025-10-13 05:32:38,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:33:40] 2025-10-13 05:32:38,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:33:40] 2025-10-13 05:32:38,305 | INFO     | job 6840081072 has completed (purged errors)
[2025-10-13 07:33:40] 2025-10-13 05:32:38,305 | INFO     | overall cleanup function is called
[2025-10-13 07:33:40] 2025-10-13 05:32:39,313 | INFO     | --- collectZombieJob: --- 10, [28059]
[2025-10-13 07:33:40] 2025-10-13 05:32:39,313 | INFO     | zombie collector waiting for pid 28059
[2025-10-13 07:33:40] 2025-10-13 05:32:39,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:33:40] 2025-10-13 05:32:39,313 | INFO     | collected zombie processes
[2025-10-13 07:33:40] 2025-10-13 05:32:39,313 | INFO     | will attempt to kill all subprocesses of pid=28059
[2025-10-13 07:33:40] 2025-10-13 05:32:39,425 | INFO     | process IDs to be killed: [28059] (in reverse order)
[2025-10-13 07:33:40] 2025-10-13 05:32:39,737 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:33:40] 2025-10-13 05:32:39,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:33:40] 2025-10-13 05:32:39,740 | INFO     | did not find any defunct processes belonging to 28059
[2025-10-13 07:33:40] 2025-10-13 05:32:39,744 | INFO     | did not find any defunct processes belonging to 28059
[2025-10-13 07:33:40] 2025-10-13 05:32:39,744 | INFO     | ready for new job
[2025-10-13 07:33:40] 2025-10-13 05:32:39,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:33:40] 2025-10-13 05:32:39,747 | INFO     | ***************************************
[2025-10-13 07:33:40] 2025-10-13 05:32:39,747 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:33:40] 2025-10-13 05:32:39,747 | INFO     | ***************************************
[2025-10-13 07:33:40] 2025-10-13 05:32:39,747 | INFO     | 
[2025-10-13 07:33:40] 2025-10-13 05:32:39,752 | INFO     | pilot is running in a VM
[2025-10-13 07:33:40] 2025-10-13 05:32:39,752 | INFO     | architecture information:
[2025-10-13 07:33:40] 2025-10-13 05:32:39,759 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:33:40] 2025-10-13 05:32:39,902 | INFO     | cat /etc/os-release:
[2025-10-13 07:33:40] NAME="CentOS Linux"
[2025-10-13 07:33:40] VERSION="7 (Core)"
[2025-10-13 07:33:40] ID="centos"
[2025-10-13 07:33:40] ID_LIKE="rhel fedora"
[2025-10-13 07:33:40] VERSION_ID="7"
[2025-10-13 07:33:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:33:40] ANSI_COLOR="0;31"
[2025-10-13 07:33:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:33:40] HOME_URL="https://www.centos.org/"
[2025-10-13 07:33:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:33:40] 
[2025-10-13 07:33:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:33:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:33:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:33:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:33:40] 
[2025-10-13 07:33:40] 2025-10-13 05:32:39,903 | INFO     | ***************************************
[2025-10-13 07:33:40] 2025-10-13 05:32:40,408 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-10-13 07:33:40] 2025-10-13 05:32:40,614 | INFO     | sufficient remaining disk space (496032022528 B)
[2025-10-13 07:33:40] 2025-10-13 05:32:40,615 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:33:40] 2025-10-13 05:32:40,615 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:33:40] 2025-10-13 05:32:40,615 | INFO     | update_server=False
[2025-10-13 07:33:40] 2025-10-13 05:32:40,615 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:33:40] 2025-10-13 05:32:40,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:33:40] 2025-10-13 05:32:40,616 | INFO     | aborting loop
[2025-10-13 07:33:40] 2025-10-13 05:32:40,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:33:40] 2025-10-13 05:32:40,742 | INFO     | all payload control threads have been joined
[2025-10-13 07:33:40] 2025-10-13 05:32:40,949 | INFO     | all data control threads have been joined
[2025-10-13 07:33:40] 2025-10-13 05:32:41,101 | INFO     | all job control threads have been joined
[2025-10-13 07:33:40] 2025-10-13 05:32:41,621 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:41,622 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:41,748 | INFO     | [payload] control thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:41,756 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:41,825 | INFO     | [job] validate thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:41,955 | INFO     | [data] control thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:42,107 | INFO     | [job] control thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:42,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:33:40] 2025-10-13 05:32:42,239 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:42,321 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:42,412 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:42,412 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:42,629 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:42,990 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:43,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:33:40] 2025-10-13 05:32:44,290 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:46,182 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:32:50,734 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:33:40] 2025-10-13 05:32:51,740 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:33:40] 2025-10-13 05:33:10,588 | INFO     | PID=21425 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 07:33:40] 2025-10-13 05:33:10,588 | INFO     | .. there are 9 such processes running
[2025-10-13 07:33:40] 2025-10-13 05:33:10,590 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:33:40] 2025-10-13 05:33:10,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:33:40] 2025-10-13 05:33:10,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:33:40] 2025-10-13 05:33:31,476 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:33:40] 2025-10-13 05:33:31,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482955958080)>', '<ExcThread(monitor, started 140482524993280)>']
[2025-10-13 07:33:40] 2025-10-13 05:33:31,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:33:40] 2025-10-13 05:33:31,713 | INFO     | [monitor] control thread has ended
[2025-10-13 07:33:40] 2025-10-13 05:33:36,681 | INFO     | all workflow threads have been joined
[2025-10-13 07:33:40] 2025-10-13 05:33:36,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:33:40] 2025-10-13 05:33:36,681 | INFO     | traces error code: 0
[2025-10-13 07:33:40] 2025-10-13 05:33:36,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:33:40] 2025-10-13 05:33:37,071 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:33:40] 2025-10-13 05:33:37,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:33:40] 2025-10-13 05:33:37,249 [wrapper] pilotpid: 21425
[2025-10-13 07:33:40] 2025-10-13 05:33:37,290 [wrapper] Pilot exit status: 0
[2025-10-13 07:33:40] 2025-10-13 05:33:37,760 [wrapper] pandaids: 6840081072
[2025-10-13 07:33:40] 2025-10-13 05:33:38,874 [wrapper] cleanup supervisor_pilot 19719 21426
[2025-10-13 07:33:40] 2025-10-13 05:33:38,992 [wrapper] Test setup, not cleaning
[2025-10-13 07:33:40] 2025-10-13 05:33:39,105 [wrapper] apfmon messages muted
[2025-10-13 07:33:40] 2025-10-13 05:33:39,217 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:33:40] 2025-10-13 05:33:39,310 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:33:40]  *** Error codes and diagnostics ***
[2025-10-13 07:33:40]     "exeErrorCode": 0,
[2025-10-13 07:33:40]     "exeErrorDiag": "",
[2025-10-13 07:33:40]     "pilotErrorCode": 0,
[2025-10-13 07:33:40]     "pilotErrorDiag": "",
[2025-10-13 07:33:40]  *** Listing of results directory ***
[2025-10-13 07:33:40] total 404108
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc    557409 Oct 12 15:22 pilot3.tar.gz
[2025-10-13 07:33:40] -rwx------. 1 boinc boinc     36292 Oct 12 15:31 runpilot2-wrapper.sh
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc      5112 Oct 12 15:31 queuedata.json
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc       100 Oct 13 03:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:33:40] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 03:34 run_atlas
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc       105 Oct 13 03:34 job.xml
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc      6390 Oct 13 03:34 init_data.xml
[2025-10-13 07:33:40] -rw-r--r--. 2 boinc boinc 220100232 Oct 13 03:34 EVNT.46676267._003865.pool.root.1
[2025-10-13 07:33:40] -rw-r--r--. 2 boinc boinc     15120 Oct 13 03:34 start_atlas.sh
[2025-10-13 07:33:40] drwxrwx--x. 2 boinc boinc        68 Oct 13 03:34 shared
[2025-10-13 07:33:40] -rw-r--r--. 2 boinc boinc    569680 Oct 13 03:34 input.tar.gz
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc         0 Oct 13 03:34 boinc_lockfile
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc      2550 Oct 13 03:34 pandaJob.out
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc    975595 Oct 13 03:38 agis_schedconf.cvmfs.json
[2025-10-13 07:33:40] drwx------. 5 boinc boinc      4096 Oct 13 03:38 pilot3
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc 185145413 Oct 13 07:29 HITS.46676269._079444.pool.root.1
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc       531 Oct 13 07:30 boinc_task_state.xml
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc      1014 Oct 13 07:30 memory_monitor_summary.json
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc   1560580 Oct 13 07:31 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc    446259 Oct 13 07:31 log.46676269._079444.job.log.tgz.1
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc      7779 Oct 13 07:32 heartbeat.json
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc        95 Oct 13 07:33 pilot_heartbeat.json
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc      8192 Oct 13 07:33 boinc_mmap_file
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc        28 Oct 13 07:33 wrapper_checkpoint.txt
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc      4956 Oct 13 07:33 pilotlog.txt
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc   1888751 Oct 13 07:33 log.46676269._079444.job.log.1
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc       357 Oct 13 07:33 output.list
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc       620 Oct 13 07:33 runtime_log
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc   2355200 Oct 13 07:33 result.tar.gz
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc       656 Oct 13 07:33 twOKDmFMBS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtzTMDmIDC0On.diag
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc      8703 Oct 13 07:33 runtime_log.err
[2025-10-13 07:33:40] -rw-r--r--. 1 boinc boinc     20605 Oct 13 07:33 stderr.txt
[2025-10-13 07:33:40] HITS file was successfully produced:
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc 185145413 Oct 13 07:29 shared/HITS.pool.root.1
[2025-10-13 07:33:40]  *** Contents of shared directory: ***
[2025-10-13 07:33:40] total 398628
[2025-10-13 07:33:40] -rw-r--r--. 2 boinc boinc 220100232 Oct 13 03:34 ATLAS.root_0
[2025-10-13 07:33:40] -rw-r--r--. 2 boinc boinc     15120 Oct 13 03:34 start_atlas.sh
[2025-10-13 07:33:40] -rw-r--r--. 2 boinc boinc    569680 Oct 13 03:34 input.tar.gz
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc 185145413 Oct 13 07:29 HITS.pool.root.1
[2025-10-13 07:33:40] -rw-------. 1 boinc boinc   2355200 Oct 13 07:33 result.tar.gz
07:33:42 (17668): run_atlas exited; CPU time 51593.793973
07:33:42 (17668): called boinc_finish(0)

</stderr_txt>
]]>

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