Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:00:58 (243428): wrapper (7.7.26015): starting
13:00:58 (243428): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:00:58] Arguments: --nthreads 8
[2025-10-12 13:00:58] Threads: 8
[2025-10-12 13:00:58] Checking for CVMFS
[2025-10-12 13:00:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:00:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:00:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:00:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:00:58] 2.13.2.0 128745 116248 153728 151627 1 314 39195695 39288832 8361 16776704 0 65453867 99.777 42043608 35887 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:00:58] CVMFS is ok
[2025-10-12 13:00:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:00:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:00:58] Further information can be found at the LHC@home message board.
[2025-10-12 13:00:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:00:58] Checking for apptainer binary...
[2025-10-12 13:00:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:00:58] Running /usr/bin/apptainer --version
[2025-10-12 13:00:58] apptainer version 1.4.3-1.el9
[2025-10-12 13:00:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:00:58] c-211-4.aglt2.org
[2025-10-12 13:00:58] apptainer works
[2025-10-12 13:00:58] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:00:58] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:00:58] Starting ATLAS job with PandaID=6839928066
[2025-10-12 13:00:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:45:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:45:28] 2025-10-13 01:44:48,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:45:28] 2025-10-13 01:44:48,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:45:28] 2025-10-13 01:44:48,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:45:28] 2025-10-13 01:44:48,920 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:45:28] 2025-10-13 01:44:48,921 | INFO     | sum of square deviations: 42105259488.04087
[2025-10-12 21:45:28] 2025-10-13 01:44:48,927 | INFO     | sum of deviations: 278588891300.6539
[2025-10-12 21:45:28] 2025-10-13 01:44:48,928 | INFO     | mean x: 1760304169.9241245
[2025-10-12 21:45:28] 2025-10-13 01:44:48,928 | INFO     | mean y: 2471439.7859922177
[2025-10-12 21:45:28] 2025-10-13 01:44:48,928 | INFO     | -- intersect: -11644557767.82091
[2025-10-12 21:45:28] 2025-10-13 01:44:48,928 | INFO     | intersect: -11644557767.82091
[2025-10-12 21:45:28] 2025-10-13 01:44:48,929 | INFO     | chi2: 4.574837606835162
[2025-10-12 21:45:28] 2025-10-13 01:44:48,930 | INFO     | sum of square deviations: 40888526487.17488
[2025-10-12 21:45:28] 2025-10-13 01:44:48,936 | INFO     | sum of deviations: 307227896234.9249
[2025-10-12 21:45:28] 2025-10-13 01:44:48,937 | INFO     | mean x: 1760304017.4361494
[2025-10-12 21:45:28] 2025-10-13 01:44:48,937 | INFO     | mean y: 2474996.982318271
[2025-10-12 21:45:28] 2025-10-13 01:44:48,937 | INFO     | -- intersect: -13224083807.488832
[2025-10-12 21:45:28] 2025-10-13 01:44:48,937 | INFO     | intersect: -13224083807.488832
[2025-10-12 21:45:28] 2025-10-13 01:44:48,938 | INFO     | chi2: 3.8911593671702156
[2025-10-12 21:45:28] 2025-10-13 01:44:48,938 | INFO     | current chi2=3.8911593671702156 (change=14.944317119442191 %)
[2025-10-12 21:45:28] 2025-10-13 01:44:48,938 | INFO     | right removable region: 508
[2025-10-12 21:45:28] 2025-10-13 01:44:48,939 | INFO     | sum of square deviations: 40888173543.04519
[2025-10-12 21:45:28] 2025-10-13 01:44:48,946 | INFO     | sum of deviations: 133704098094.31238
[2025-10-12 21:45:28] 2025-10-13 01:44:48,947 | INFO     | mean x: 1760304322.4341848
[2025-10-12 21:45:28] 2025-10-13 01:44:48,947 | INFO     | mean y: 2489575.7406679764
[2025-10-12 21:45:28] 2025-10-13 01:44:48,947 | INFO     | -- intersect: -5753695682.933365
[2025-10-12 21:45:28] 2025-10-13 01:44:48,947 | INFO     | intersect: -5753695682.933365
[2025-10-12 21:45:28] 2025-10-13 01:44:48,948 | INFO     | chi2: 1.614012819338326
[2025-10-12 21:45:28] 2025-10-13 01:44:48,948 | INFO     | current chi2=1.614012819338326 (change=64.71977897255051 %)
[2025-10-12 21:45:28] 2025-10-13 01:44:48,949 | INFO     | sum of square deviations: 39694856097.09327
[2025-10-12 21:45:28] 2025-10-13 01:44:48,955 | INFO     | sum of deviations: 81058469961.79338
[2025-10-12 21:45:28] 2025-10-13 01:44:48,955 | INFO     | mean x: 1760304474.938492
[2025-10-12 21:45:28] 2025-10-13 01:44:48,955 | INFO     | mean y: 2496288.412698413
[2025-10-12 21:45:28] 2025-10-13 01:44:48,955 | INFO     | -- intersect: -3592115241.5144954
[2025-10-12 21:45:28] 2025-10-13 01:44:48,955 | INFO     | intersect: -3592115241.5144954
[2025-10-12 21:45:28] 2025-10-13 01:44:48,956 | INFO     | chi2: 1.1872992228181376
[2025-10-12 21:45:28] 2025-10-13 01:44:48,956 | INFO     | current chi2=1.1872992228181376 (change=26.43805497747671 %)
[2025-10-12 21:45:28] 2025-10-13 01:44:48,957 | INFO     | sum of square deviations: 38524980953.12203
[2025-10-12 21:45:28] 2025-10-13 01:44:48,963 | INFO     | sum of deviations: 43777220791.989944
[2025-10-12 21:45:28] 2025-10-13 01:44:48,964 | INFO     | mean x: 1760304627.4428859
[2025-10-12 21:45:28] 2025-10-13 01:44:48,964 | INFO     | mean y: 2501153.7014028057
[2025-10-12 21:45:28] 2025-10-13 01:44:48,964 | INFO     | -- intersect: -1997791706.417035
[2025-10-12 21:45:28] 2025-10-13 01:44:48,964 | INFO     | intersect: -1997791706.417035
[2025-10-12 21:45:28] 2025-10-13 01:44:48,965 | INFO     | chi2: 0.9971749678437805
[2025-10-12 21:45:28] 2025-10-13 01:44:48,965 | INFO     | current chi2=0.9971749678437805 (change=16.013171012028792 %)
[2025-10-12 21:45:28] 2025-10-13 01:44:48,965 | INFO     | left removable region: 30
[2025-10-12 21:45:28] 2025-10-13 01:44:48,966 | INFO     | sum of square deviations: 33862581985.464394
[2025-10-12 21:45:28] 2025-10-13 01:44:48,971 | INFO     | sum of deviations: 23486580711.167377
[2025-10-12 21:45:28] 2025-10-13 01:44:48,972 | INFO     | mean x: 1760304901.9665272
[2025-10-12 21:45:28] 2025-10-13 01:44:48,972 | INFO     | mean y: 2511894.010460251
[2025-10-12 21:45:28] 2025-10-13 01:44:48,972 | INFO     | -- intersect: -1218409274.1995497
[2025-10-12 21:45:28] 2025-10-13 01:44:48,972 | INFO     | intersect: -1218409274.1995497
[2025-10-12 21:45:28] 2025-10-13 01:44:48,972 | INFO     | chi2: 0.039712584170485773
[2025-10-12 21:45:28] 2025-10-13 01:44:48,973 | INFO     | -- intersect: -1218409274.1995497
[2025-10-12 21:45:28] 2025-10-13 01:44:48,973 | INFO     | current memory leak: 0.69 B/s (using 478 data points, chi2=0.04)
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | could have reported an average CPU frequency of 2598 MHz (20 samples)
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | ..............................
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | . Timing measurements:
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | . get job = 0 s
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | . initial setup = 3 s
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | . payload setup = 9 s
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | . stage-in = 0 s
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | . payload execution = 31355 s
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | . stage-out = 2 s
[2025-10-12 21:45:28] 2025-10-13 01:44:48,974 | INFO     | . log creation = 0 s
[2025-10-12 21:45:28] 2025-10-13 01:44:48,975 | INFO     | ..............................
[2025-10-12 21:45:28] 2025-10-13 01:44:49,352 | INFO     | 
[2025-10-12 21:45:28] 2025-10-13 01:44:49,352 | INFO     | job summary report
[2025-10-12 21:45:28] 2025-10-13 01:44:49,352 | INFO     | --------------------------------------------------
[2025-10-12 21:45:28] 2025-10-13 01:44:49,352 | INFO     | PanDA job id: 6839928066
[2025-10-12 21:45:28] 2025-10-13 01:44:49,352 | INFO     | task id: 46676269
[2025-10-12 21:45:28] 2025-10-13 01:44:49,352 | INFO     | errors: (none)
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | pilot state: finished 
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | transexitcode: 0
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | exeerrorcode: 0
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | exeerrordiag: 
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | exitcode: 0
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | exitmsg: OK
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | cpuconsumptiontime: 54398 s
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | nevents: 400
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | neventsw: 0
[2025-10-12 21:45:28] 2025-10-13 01:44:49,353 | INFO     | pid: 253495
[2025-10-12 21:45:28] 2025-10-13 01:44:49,354 | INFO     | pgrp: 253495
[2025-10-12 21:45:28] 2025-10-13 01:44:49,354 | INFO     | corecount: 8
[2025-10-12 21:45:28] 2025-10-13 01:44:49,354 | INFO     | event service: False
[2025-10-12 21:45:28] 2025-10-13 01:44:49,354 | INFO     | sizes: {0: 2348027, 1: 2348883, 2: 2348883, 8: 2349173, 12: 2349201, 31367: 2387499, 31368: 2387626, 31371: 2396680, 31374: 2396736, 31383: 2396930}
[2025-10-12 21:45:28] 2025-10-13 01:44:49,354 | INFO     | --------------------------------------------------
[2025-10-12 21:45:28] 2025-10-13 01:44:49,354 | INFO     | 
[2025-10-12 21:45:28] 2025-10-13 01:44:49,354 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 21:45:28] 2025-10-13 01:44:49,435 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,435 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,437 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:45:28] 2025-10-13 01:44:49,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,437 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:45:28] 2025-10-13 01:44:49,437 | INFO     | job 6839928066 has completed (purged errors)
[2025-10-12 21:45:28] 2025-10-13 01:44:49,437 | INFO     | overall cleanup function is called
[2025-10-12 21:45:28] 2025-10-13 01:44:50,449 | INFO     | --- collectZombieJob: --- 10, [253495]
[2025-10-12 21:45:28] 2025-10-13 01:44:50,449 | INFO     | zombie collector waiting for pid 253495
[2025-10-12 21:45:28] 2025-10-13 01:44:50,449 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:45:28] 2025-10-13 01:44:50,449 | INFO     | collected zombie processes
[2025-10-12 21:45:28] 2025-10-13 01:44:50,449 | INFO     | will attempt to kill all subprocesses of pid=253495
[2025-10-12 21:45:28] 2025-10-13 01:44:50,832 | INFO     | process IDs to be killed: [253495] (in reverse order)
[2025-10-12 21:45:28] 2025-10-13 01:44:51,026 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:45:28] 2025-10-13 01:44:51,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:45:28] 2025-10-13 01:44:51,034 | INFO     | did not find any defunct processes belonging to 253495
[2025-10-12 21:45:28] 2025-10-13 01:44:51,042 | INFO     | did not find any defunct processes belonging to 253495
[2025-10-12 21:45:28] 2025-10-13 01:44:51,042 | INFO     | ready for new job
[2025-10-12 21:45:28] 2025-10-13 01:44:51,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:45:28] 2025-10-13 01:44:51,046 | INFO     | ***************************************
[2025-10-12 21:45:28] 2025-10-13 01:44:51,046 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:45:28] 2025-10-13 01:44:51,046 | INFO     | ***************************************
[2025-10-12 21:45:28] 2025-10-13 01:44:51,046 | INFO     | 
[2025-10-12 21:45:28] 2025-10-13 01:44:51,048 | INFO     | architecture information:
[2025-10-12 21:45:28] 2025-10-13 01:44:51,049 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:45:28] 2025-10-13 01:44:51,066 | INFO     | cat /etc/os-release:
[2025-10-12 21:45:28] NAME="CentOS Linux"
[2025-10-12 21:45:28] VERSION="7 (Core)"
[2025-10-12 21:45:28] ID="centos"
[2025-10-12 21:45:28] ID_LIKE="rhel fedora"
[2025-10-12 21:45:28] VERSION_ID="7"
[2025-10-12 21:45:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:45:28] ANSI_COLOR="0;31"
[2025-10-12 21:45:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:45:28] HOME_URL="https://www.centos.org/"
[2025-10-12 21:45:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:45:28] 
[2025-10-12 21:45:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:45:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:45:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:45:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:45:28] 
[2025-10-12 21:45:28] 2025-10-13 01:44:51,066 | INFO     | ***************************************
[2025-10-12 21:45:28] 2025-10-13 01:44:51,570 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 21:45:28] 2025-10-13 01:44:51,654 | INFO     | sufficient remaining disk space (52979302400 B)
[2025-10-12 21:45:28] 2025-10-13 01:44:51,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:45:28] 2025-10-13 01:44:51,655 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:45:28] 2025-10-13 01:44:51,655 | INFO     | update_server=False
[2025-10-12 21:45:28] 2025-10-13 01:44:51,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:45:28] 2025-10-13 01:44:51,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:45:28] 2025-10-13 01:44:51,656 | INFO     | aborting loop
[2025-10-12 21:45:28] 2025-10-13 01:44:51,752 | INFO     | all data control threads have been joined
[2025-10-12 21:45:28] 2025-10-13 01:44:52,661 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:52,662 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:52,758 | INFO     | [data] control thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:52,758 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:52,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:45:28] 2025-10-13 01:44:52,838 | INFO     | all job control threads have been joined
[2025-10-12 21:45:28] 2025-10-13 01:44:52,920 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:52,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:52,963 | INFO     | [job] validate thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:52,976 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:53,162 | INFO     | all payload control threads have been joined
[2025-10-12 21:45:28] 2025-10-13 01:44:53,540 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:53,843 | INFO     | [job] control thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:53,966 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:54,136 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:54,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:45:28] 2025-10-13 01:44:54,168 | INFO     | [payload] control thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:54,838 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:55,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:45:28] 2025-10-13 01:44:55,170 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:44:59,072 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:45:28] 2025-10-13 01:45:22,128 | INFO     | PID=247119 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 21:45:28] 2025-10-13 01:45:22,128 | INFO     | .. there are 7 such processes running
[2025-10-12 21:45:28] 2025-10-13 01:45:22,129 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:45:28] 2025-10-13 01:45:22,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:45:28] 2025-10-13 01:45:22,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:45:28] 2025-10-13 01:45:22,572 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:45:28] 2025-10-13 01:45:22,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047790073664)>', '<ExcThread(monitor, started 140046904571648)>']
[2025-10-12 21:45:28] 2025-10-13 01:45:23,135 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:45:28] 2025-10-13 01:45:23,135 | INFO     | [monitor] control thread has ended
[2025-10-12 21:45:28] 2025-10-13 01:45:27,677 | INFO     | all workflow threads have been joined
[2025-10-12 21:45:28] 2025-10-13 01:45:27,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:45:28] 2025-10-13 01:45:27,677 | INFO     | traces error code: 0
[2025-10-12 21:45:28] 2025-10-13 01:45:27,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:45:28] 2025-10-13 01:45:28,000 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:45:28] 2025-10-13 01:45:28,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:45:28] 2025-10-13 01:45:28,006 [wrapper] pilotpid: 247119
[2025-10-12 21:45:28] 2025-10-13 01:45:28,009 [wrapper] Pilot exit status: 0
[2025-10-12 21:45:28] 2025-10-13 01:45:28,043 [wrapper] pandaids: 6839928066
[2025-10-12 21:45:28] 2025-10-13 01:45:28,087 [wrapper] cleanup supervisor_pilot  899144 247120
[2025-10-12 21:45:28] 2025-10-13 01:45:28,090 [wrapper] Test setup, not cleaning
[2025-10-12 21:45:28] 2025-10-13 01:45:28,094 [wrapper] apfmon messages muted
[2025-10-12 21:45:28] 2025-10-13 01:45:28,097 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:45:28] 2025-10-13 01:45:28,100 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:45:28]  *** Error codes and diagnostics ***
[2025-10-12 21:45:28]     "exeErrorCode": 0,
[2025-10-12 21:45:28]     "exeErrorDiag": "",
[2025-10-12 21:45:28]     "pilotErrorCode": 0,
[2025-10-12 21:45:28]     "pilotErrorDiag": "",
[2025-10-12 21:45:28]  *** Listing of results directory ***
[2025-10-12 21:45:28] total 414880
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 07:54 pilot3.tar.gz
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:03 queuedata.json
[2025-10-12 21:45:28] -rwx------. 1 boincer umatlas     36292 Oct 12 08:04 runpilot2-wrapper.sh
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:45:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:00 run_atlas
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:00 job.xml
[2025-10-12 21:45:28] -rw-r--r--. 2 boincer umatlas 222449892 Oct 12 13:00 EVNT.46676267._003719.pool.root.1
[2025-10-12 21:45:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:00 start_atlas.sh
[2025-10-12 21:45:28] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:00 shared
[2025-10-12 21:45:28] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 13:00 input.tar.gz
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:00 boinc_lockfile
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 13:00 pandaJob.out
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas    975528 Oct 12 13:01 agis_schedconf.cvmfs.json
[2025-10-12 21:45:28] drwx------. 5 boincer umatlas      4096 Oct 12 13:01 pilot3
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 21:40 init_data.xml
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas 189426404 Oct 12 21:43 HITS.46676269._077605.pool.root.1
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas       531 Oct 12 21:43 boinc_task_state.xml
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas      1041 Oct 12 21:44 memory_monitor_summary.json
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas    659689 Oct 12 21:44 log.46676269._077605.job.log.tgz.1
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas      7819 Oct 12 21:44 heartbeat.json
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas        95 Oct 12 21:45 pilot_heartbeat.json
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas        28 Oct 12 21:45 wrapper_checkpoint.txt
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:45 boinc_mmap_file
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas      4822 Oct 12 21:45 pilotlog.txt
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas   3868845 Oct 12 21:45 log.46676269._077605.job.log.1
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas       357 Oct 12 21:45 output.list
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:45 runtime_log
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas   4546560 Oct 12 21:45 result.tar.gz
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 21:45 runtime_log.err
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas       657 Oct 12 21:45 eopKDm1z9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYhjNDmbxvNZm.diag
[2025-10-12 21:45:28] -rw-r--r--. 1 boincer umatlas     21003 Oct 12 21:45 stderr.txt
[2025-10-12 21:45:28] HITS file was successfully produced:
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas 189426404 Oct 12 21:43 shared/HITS.pool.root.1
[2025-10-12 21:45:28]  *** Contents of shared directory: ***
[2025-10-12 21:45:28] total 407248
[2025-10-12 21:45:28] -rw-r--r--. 2 boincer umatlas 222449892 Oct 12 13:00 ATLAS.root_0
[2025-10-12 21:45:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:00 start_atlas.sh
[2025-10-12 21:45:28] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 13:00 input.tar.gz
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas 189426404 Oct 12 21:43 HITS.pool.root.1
[2025-10-12 21:45:28] -rw-------. 1 boincer umatlas   4546560 Oct 12 21:45 result.tar.gz
21:45:30 (243428): run_atlas exited; CPU time 55059.509907
21:45:30 (243428): called boinc_finish(0)

</stderr_txt>
]]>

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