Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:54:10 (3849087): wrapper (7.7.26015): starting
15:54:10 (3849087): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 15:54:10] Arguments: --nthreads 9
[2025-10-12 15:54:10] Threads: 9
[2025-10-12 15:54:10] Checking for CVMFS
[2025-10-12 15:54:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:54:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:54:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:54:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:54:10] 2.13.2.0 116703 138556 307784 151635 3 72 23964321 32935936 18310 16776704 0 94506158 99.675 86512823 30408 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 15:54:10] CVMFS is ok
[2025-10-12 15:54:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 15:54:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 15:54:10] Further information can be found at the LHC@home message board.
[2025-10-12 15:54:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:54:10] Checking for apptainer binary...
[2025-10-12 15:54:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:54:10] Running /usr/bin/apptainer --version
[2025-10-12 15:54:10] apptainer version 1.4.3-1.el9
[2025-10-12 15:54:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:54:11] c-5-3.aglt2.org
[2025-10-12 15:54:11] apptainer works
[2025-10-12 15:54:11] Set ATHENA_PROC_NUMBER=9
[2025-10-12 15:54:11] Set ATHENA_CORE_NUMBER=9
[2025-10-12 15:54:11] Starting ATLAS job with PandaID=6839822773
[2025-10-12 15:54:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:41:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:41:00] 2025-10-13 00:40:13,415 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:41:00] 2025-10-13 00:40:13,417 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:41:00] 2025-10-13 00:40:13,417 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:41:00] 2025-10-13 00:40:13,424 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:41:00] 2025-10-13 00:40:13,425 | INFO     | sum of square deviations: 6879666182.811428
[2025-10-12 20:41:00] 2025-10-13 00:40:13,428 | INFO     | sum of deviations: -20700840701.170822
[2025-10-12 20:41:00] 2025-10-13 00:40:13,428 | INFO     | mean x: 1760307427.683274
[2025-10-12 20:41:00] 2025-10-13 00:40:13,428 | INFO     | mean y: 2218369.75088968
[2025-10-12 20:41:00] 2025-10-13 00:40:13,428 | INFO     | -- intersect: 5298964269.516017
[2025-10-12 20:41:00] 2025-10-13 00:40:13,429 | INFO     | intersect: 5298964269.516017
[2025-10-12 20:41:00] 2025-10-13 00:40:13,429 | INFO     | chi2: 2.482137326877537
[2025-10-12 20:41:00] 2025-10-13 00:40:13,430 | INFO     | sum of square deviations: 6518955185.434824
[2025-10-12 20:41:00] 2025-10-13 00:40:13,432 | INFO     | sum of deviations: 392526862.69564986
[2025-10-12 20:41:00] 2025-10-13 00:40:13,433 | INFO     | mean x: 1760307275.1956522
[2025-10-12 20:41:00] 2025-10-13 00:40:13,433 | INFO     | mean y: 2227181.7463768115
[2025-10-12 20:41:00] 2025-10-13 00:40:13,433 | INFO     | -- intersect: -103766474.05550592
[2025-10-12 20:41:00] 2025-10-13 00:40:13,433 | INFO     | intersect: -103766474.05550592
[2025-10-12 20:41:00] 2025-10-13 00:40:13,433 | INFO     | chi2: 1.7715812758180964
[2025-10-12 20:41:00] 2025-10-13 00:40:13,434 | INFO     | current chi2=1.7715812758180964 (change=28.62678238489331 %)
[2025-10-12 20:41:00] 2025-10-13 00:40:13,434 | INFO     | sum of square deviations: 6171047966.789657
[2025-10-12 20:41:00] 2025-10-13 00:40:13,437 | INFO     | sum of deviations: -211749180.4907927
[2025-10-12 20:41:00] 2025-10-13 00:40:13,437 | INFO     | mean x: 1760307122.701107
[2025-10-12 20:41:00] 2025-10-13 00:40:13,437 | INFO     | mean y: 2226918.302583026
[2025-10-12 20:41:00] 2025-10-13 00:40:13,438 | INFO     | -- intersect: 62628910.419648975
[2025-10-12 20:41:00] 2025-10-13 00:40:13,438 | INFO     | intersect: 62628910.419648975
[2025-10-12 20:41:00] 2025-10-13 00:40:13,438 | INFO     | chi2: 1.7686604393862673
[2025-10-12 20:41:00] 2025-10-13 00:40:13,438 | INFO     | current chi2=1.7686604393862673 (change=0.16487171498696024 %)
[2025-10-12 20:41:00] 2025-10-13 00:40:13,438 | INFO     | right removable region: 270
[2025-10-12 20:41:00] 2025-10-13 00:40:13,439 | INFO     | sum of square deviations: 6518838065.434817
[2025-10-12 20:41:00] 2025-10-13 00:40:13,442 | INFO     | sum of deviations: -57803777723.608734
[2025-10-12 20:41:00] 2025-10-13 00:40:13,442 | INFO     | mean x: 1760307580.1956522
[2025-10-12 20:41:00] 2025-10-13 00:40:13,442 | INFO     | mean y: 2233931.492753623
[2025-10-12 20:41:00] 2025-10-13 00:40:13,443 | INFO     | -- intersect: 15611216248.501112
[2025-10-12 20:41:00] 2025-10-13 00:40:13,443 | INFO     | intersect: 15611216248.501112
[2025-10-12 20:41:00] 2025-10-13 00:40:13,443 | INFO     | chi2: 1.1225409940747528
[2025-10-12 20:41:00] 2025-10-13 00:40:13,444 | INFO     | current chi2=1.1225409940747528 (change=54.77522609569392 %)
[2025-10-12 20:41:00] 2025-10-13 00:40:13,444 | INFO     | sum of square deviations: 6170880704.789657
[2025-10-12 20:41:00] 2025-10-13 00:40:13,446 | INFO     | sum of deviations: -53681634972.693726
[2025-10-12 20:41:00] 2025-10-13 00:40:13,447 | INFO     | mean x: 1760307732.701107
[2025-10-12 20:41:00] 2025-10-13 00:40:13,447 | INFO     | mean y: 2232092.6457564575
[2025-10-12 20:41:00] 2025-10-13 00:40:13,447 | INFO     | -- intersect: 15315475317.899775
[2025-10-12 20:41:00] 2025-10-13 00:40:13,447 | INFO     | intersect: 15315475317.899775
[2025-10-12 20:41:00] 2025-10-13 00:40:13,448 | INFO     | chi2: 1.0872628871446677
[2025-10-12 20:41:00] 2025-10-13 00:40:13,448 | INFO     | current chi2=1.0872628871446677 (change=3.1427009896563205 %)
[2025-10-12 20:41:00] 2025-10-13 00:40:13,448 | INFO     | left removable region: 20
[2025-10-12 20:41:00] 2025-10-13 00:40:13,449 | INFO     | sum of square deviations: 4844719426.7839775
[2025-10-12 20:41:00] 2025-10-13 00:40:13,451 | INFO     | sum of deviations: -7163530867.351998
[2025-10-12 20:41:00] 2025-10-13 00:40:13,451 | INFO     | mean x: 1760307702.192
[2025-10-12 20:41:00] 2025-10-13 00:40:13,451 | INFO     | mean y: 2228944.924
[2025-10-12 20:41:00] 2025-10-13 00:40:13,451 | INFO     | -- intersect: 2605066684.29349
[2025-10-12 20:41:00] 2025-10-13 00:40:13,452 | INFO     | intersect: 2605066684.29349
[2025-10-12 20:41:00] 2025-10-13 00:40:13,452 | INFO     | chi2: 0.15583667236265897
[2025-10-12 20:41:00] 2025-10-13 00:40:13,452 | INFO     | -- intersect: 2605066684.29349
[2025-10-12 20:41:00] 2025-10-13 00:40:13,452 | INFO     | current memory leak: -1.48 B/s (using 250 data points, chi2=0.16)
[2025-10-12 20:41:00] 2025-10-13 00:40:13,453 | INFO     | could have reported an average CPU frequency of 2636 MHz (13 samples)
[2025-10-12 20:41:00] 2025-10-13 00:40:13,453 | INFO     | ..............................
[2025-10-12 20:41:00] 2025-10-13 00:40:13,454 | INFO     | . Timing measurements:
[2025-10-12 20:41:00] 2025-10-13 00:40:13,454 | INFO     | . get job = 0 s
[2025-10-12 20:41:00] 2025-10-13 00:40:13,454 | INFO     | . initial setup = 2 s
[2025-10-12 20:41:00] 2025-10-13 00:40:13,454 | INFO     | . payload setup = 5 s
[2025-10-12 20:41:00] 2025-10-13 00:40:13,454 | INFO     | . stage-in = 0 s
[2025-10-12 20:41:00] 2025-10-13 00:40:13,455 | INFO     | . payload execution = 17111 s
[2025-10-12 20:41:00] 2025-10-13 00:40:13,455 | INFO     | . stage-out = 3 s
[2025-10-12 20:41:00] 2025-10-13 00:40:13,455 | INFO     | . log creation = 0 s
[2025-10-12 20:41:00] 2025-10-13 00:40:13,458 | INFO     | ..............................
[2025-10-12 20:41:00] 2025-10-13 00:40:13,973 | INFO     | 
[2025-10-12 20:41:00] 2025-10-13 00:40:13,974 | INFO     | job summary report
[2025-10-12 20:41:00] 2025-10-13 00:40:13,974 | INFO     | --------------------------------------------------
[2025-10-12 20:41:00] 2025-10-13 00:40:13,974 | INFO     | PanDA job id: 6839822773
[2025-10-12 20:41:00] 2025-10-13 00:40:13,974 | INFO     | task id: 46676269
[2025-10-12 20:41:00] 2025-10-13 00:40:13,974 | INFO     | errors: (none)
[2025-10-12 20:41:00] 2025-10-13 00:40:13,974 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:41:00] 2025-10-13 00:40:13,974 | INFO     | pilot state: finished 
[2025-10-12 20:41:00] 2025-10-13 00:40:13,974 | INFO     | transexitcode: 0
[2025-10-12 20:41:00] 2025-10-13 00:40:13,974 | INFO     | exeerrorcode: 0
[2025-10-12 20:41:00] 2025-10-13 00:40:13,975 | INFO     | exeerrordiag: 
[2025-10-12 20:41:00] 2025-10-13 00:40:13,975 | INFO     | exitcode: 0
[2025-10-12 20:41:00] 2025-10-13 00:40:13,975 | INFO     | exitmsg: OK
[2025-10-12 20:41:00] 2025-10-13 00:40:13,975 | INFO     | cpuconsumptiontime: 48027 s
[2025-10-12 20:41:00] 2025-10-13 00:40:13,975 | INFO     | nevents: 400
[2025-10-12 20:41:00] 2025-10-13 00:40:13,975 | INFO     | neventsw: 0
[2025-10-12 20:41:00] 2025-10-13 00:40:13,975 | INFO     | pid: 3859845
[2025-10-12 20:41:00] 2025-10-13 00:40:13,975 | INFO     | pgrp: 3859845
[2025-10-12 20:41:00] 2025-10-13 00:40:13,975 | INFO     | corecount: 9
[2025-10-12 20:41:00] 2025-10-13 00:40:13,976 | INFO     | event service: False
[2025-10-12 20:41:00] 2025-10-13 00:40:13,976 | INFO     | sizes: {0: 2348851, 4: 2349113, 11: 2349141, 17117: 2381047, 17122: 2390101, 17135: 2390239}
[2025-10-12 20:41:00] 2025-10-13 00:40:13,976 | INFO     | --------------------------------------------------
[2025-10-12 20:41:00] 2025-10-13 00:40:13,976 | INFO     | 
[2025-10-12 20:41:00] 2025-10-13 00:40:13,976 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 20:41:00] 2025-10-13 00:40:14,119 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:41:00] 2025-10-13 00:40:14,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,125 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:41:00] 2025-10-13 00:40:14,126 | INFO     | job 6839822773 has completed (purged errors)
[2025-10-12 20:41:00] 2025-10-13 00:40:14,126 | INFO     | overall cleanup function is called
[2025-10-12 20:41:00] 2025-10-13 00:40:15,146 | INFO     | --- collectZombieJob: --- 10, [3859845]
[2025-10-12 20:41:00] 2025-10-13 00:40:15,146 | INFO     | zombie collector waiting for pid 3859845
[2025-10-12 20:41:00] 2025-10-13 00:40:15,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:41:00] 2025-10-13 00:40:15,147 | INFO     | collected zombie processes
[2025-10-12 20:41:00] 2025-10-13 00:40:15,147 | INFO     | will attempt to kill all subprocesses of pid=3859845
[2025-10-12 20:41:00] 2025-10-13 00:40:15,837 | INFO     | process IDs to be killed: [3859845] (in reverse order)
[2025-10-12 20:41:00] 2025-10-13 00:40:16,041 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:41:00] 2025-10-13 00:40:16,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:41:00] 2025-10-13 00:40:16,065 | INFO     | did not find any defunct processes belonging to 3859845
[2025-10-12 20:41:00] 2025-10-13 00:40:16,086 | INFO     | did not find any defunct processes belonging to 3859845
[2025-10-12 20:41:00] 2025-10-13 00:40:16,090 | INFO     | ready for new job
[2025-10-12 20:41:00] 2025-10-13 00:40:16,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:41:00] 2025-10-13 00:40:16,093 | INFO     | ***************************************
[2025-10-12 20:41:00] 2025-10-13 00:40:16,101 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:41:00] 2025-10-13 00:40:16,101 | INFO     | ***************************************
[2025-10-12 20:41:00] 2025-10-13 00:40:16,101 | INFO     | 
[2025-10-12 20:41:00] 2025-10-13 00:40:16,121 | INFO     | architecture information:
[2025-10-12 20:41:00] 2025-10-13 00:40:16,130 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:41:00] 2025-10-13 00:40:16,196 | INFO     | cat /etc/os-release:
[2025-10-12 20:41:00] NAME="CentOS Linux"
[2025-10-12 20:41:00] VERSION="7 (Core)"
[2025-10-12 20:41:00] ID="centos"
[2025-10-12 20:41:00] ID_LIKE="rhel fedora"
[2025-10-12 20:41:00] VERSION_ID="7"
[2025-10-12 20:41:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:41:00] ANSI_COLOR="0;31"
[2025-10-12 20:41:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:41:00] HOME_URL="https://www.centos.org/"
[2025-10-12 20:41:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:41:00] 
[2025-10-12 20:41:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:41:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:41:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:41:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:41:00] 
[2025-10-12 20:41:00] 2025-10-13 00:40:16,197 | INFO     | ***************************************
[2025-10-12 20:41:00] 2025-10-13 00:40:16,700 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 20:41:00] 2025-10-13 00:40:16,779 | INFO     | sufficient remaining disk space (75876007936 B)
[2025-10-12 20:41:00] 2025-10-13 00:40:16,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:41:00] 2025-10-13 00:40:16,779 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:41:00] 2025-10-13 00:40:16,780 | INFO     | update_server=False
[2025-10-12 20:41:00] 2025-10-13 00:40:16,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:41:00] 2025-10-13 00:40:16,974 | INFO     | all payload control threads have been joined
[2025-10-12 20:41:00] 2025-10-13 00:40:17,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:41:00] 2025-10-13 00:40:17,050 | INFO     | aborting loop
[2025-10-12 20:41:00] 2025-10-13 00:40:17,786 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:17,791 | INFO     | all data control threads have been joined
[2025-10-12 20:41:00] 2025-10-13 00:40:17,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:41:00] 2025-10-13 00:40:17,980 | INFO     | [payload] control thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:18,056 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:18,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:18,485 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:18,500 | INFO     | all job control threads have been joined
[2025-10-12 20:41:00] 2025-10-13 00:40:18,535 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:18,749 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:18,750 | INFO     | [job] validate thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:18,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:41:00] 2025-10-13 00:40:18,785 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:18,797 | INFO     | [data] control thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:18,981 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:19,236 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:19,506 | INFO     | [job] control thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:19,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:41:00] 2025-10-13 00:40:19,775 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:19,844 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:23,691 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:41:00] 2025-10-13 00:40:46,063 | INFO     | PID=3852788 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:41:00] 2025-10-13 00:40:46,063 | INFO     | .. there are 30 such processes running
[2025-10-12 20:41:00] 2025-10-13 00:40:46,063 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:41:00] 2025-10-13 00:40:46,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:41:00] 2025-10-13 00:40:46,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:41:00] 2025-10-13 00:40:54,040 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:41:00] 2025-10-13 00:40:54,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096415131456)>', '<ExcThread(monitor, started 140095785002752)>']
[2025-10-12 20:41:00] 2025-10-13 00:40:55,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:41:00] 2025-10-13 00:40:55,128 | INFO     | [monitor] control thread has ended
[2025-10-12 20:41:00] 2025-10-13 00:40:59,784 | INFO     | all workflow threads have been joined
[2025-10-12 20:41:00] 2025-10-13 00:40:59,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:41:00] 2025-10-13 00:40:59,785 | INFO     | traces error code: 0
[2025-10-12 20:41:00] 2025-10-13 00:40:59,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:41:00] 2025-10-13 00:41:00,097 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:41:00] 2025-10-13 00:41:00,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:41:00] 2025-10-13 00:41:00,115 [wrapper] pilotpid: 3852788
[2025-10-12 20:41:00] 2025-10-13 00:41:00,119 [wrapper] Pilot exit status: 0
[2025-10-12 20:41:00] 2025-10-13 00:41:00,158 [wrapper] pandaids: 6839822773
[2025-10-12 20:41:00] 2025-10-13 00:41:00,335 [wrapper] cleanup supervisor_pilot  565121 3852789
[2025-10-12 20:41:00] 2025-10-13 00:41:00,340 [wrapper] Test setup, not cleaning
[2025-10-12 20:41:00] 2025-10-13 00:41:00,343 [wrapper] apfmon messages muted
[2025-10-12 20:41:00] 2025-10-13 00:41:00,355 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:41:00] 2025-10-13 00:41:00,374 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:41:00]  *** Error codes and diagnostics ***
[2025-10-12 20:41:00]     "exeErrorCode": 0,
[2025-10-12 20:41:00]     "exeErrorDiag": "",
[2025-10-12 20:41:00]     "pilotErrorCode": 0,
[2025-10-12 20:41:00]     "pilotErrorDiag": "",
[2025-10-12 20:41:00]  *** Listing of results directory ***
[2025-10-12 20:41:00] total 410996
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 05:31 queuedata.json
[2025-10-12 20:41:00] -rwx------. 1 boincer umatlas     36292 Oct 12 05:34 runpilot2-wrapper.sh
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas       100 Oct 12 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:41:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 15:54 run_atlas
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas       105 Oct 12 15:54 job.xml
[2025-10-12 20:41:00] -rw-r--r--. 2 boincer umatlas 221494999 Oct 12 15:54 EVNT.46676267._003583.pool.root.1
[2025-10-12 20:41:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:54 start_atlas.sh
[2025-10-12 20:41:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 15:54 shared
[2025-10-12 20:41:00] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 15:54 input.tar.gz
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas         0 Oct 12 15:54 boinc_lockfile
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 15:54 pandaJob.out
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas    975536 Oct 12 15:54 agis_schedconf.cvmfs.json
[2025-10-12 20:41:00] drwx------. 5 boincer umatlas      4096 Oct 12 15:54 pilot3
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas      6704 Oct 12 20:31 init_data.xml
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas 190239668 Oct 12 20:39 HITS.46676269._075385.pool.root.1
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas       531 Oct 12 20:39 boinc_task_state.xml
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas      1042 Oct 12 20:39 memory_monitor_summary.json
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas        95 Oct 12 20:39 pilot_heartbeat.json
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas    491105 Oct 12 20:39 log.46676269._075385.job.log.tgz.1
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas      7817 Oct 12 20:40 heartbeat.json
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas        28 Oct 12 20:40 wrapper_checkpoint.txt
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 20:40 boinc_mmap_file
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas      4824 Oct 12 20:40 pilotlog.txt
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas   2119421 Oct 12 20:41 log.46676269._075385.job.log.1
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas       357 Oct 12 20:41 output.list
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas       620 Oct 12 20:41 runtime_log
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas   2631680 Oct 12 20:41 result.tar.gz
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas       654 Oct 12 20:41 uZbKDmoe7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsLjNDmJ97Vwm.diag
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas      8689 Oct 12 20:41 runtime_log.err
[2025-10-12 20:41:00] -rw-r--r--. 1 boincer umatlas     20940 Oct 12 20:41 stderr.txt
[2025-10-12 20:41:00] HITS file was successfully produced:
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas 190239668 Oct 12 20:39 shared/HITS.pool.root.1
[2025-10-12 20:41:00]  *** Contents of shared directory: ***
[2025-10-12 20:41:00] total 405240
[2025-10-12 20:41:00] -rw-r--r--. 2 boincer umatlas 221494999 Oct 12 15:54 ATLAS.root_0
[2025-10-12 20:41:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 15:54 start_atlas.sh
[2025-10-12 20:41:00] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 15:54 input.tar.gz
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas 190239668 Oct 12 20:39 HITS.pool.root.1
[2025-10-12 20:41:00] -rw-------. 1 boincer umatlas   2631680 Oct 12 20:41 result.tar.gz
20:41:23 (3849087): run_atlas exited; CPU time 48615.843169
20:41:23 (3849087): called boinc_finish(0)

</stderr_txt>
]]>

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