Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:22:04 (3403316): wrapper (7.7.26015): starting
13:22:04 (3403316): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 13:22:04] Arguments: --nthreads 8
[2025-10-12 13:22:04] Threads: 8
[2025-10-12 13:22:04] Checking for CVMFS
[2025-10-12 13:22:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:22:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:22:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:22:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:22:06] 2.13.2.0 8406 36799 90828 151629 0 288 25559042 40960001 28781 16776704 0 231370056 99.853 81847480 49341 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 13:22:06] CVMFS is ok
[2025-10-12 13:22:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:22:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:22:06] Further information can be found at the LHC@home message board.
[2025-10-12 13:22:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:22:06] Checking for apptainer binary...
[2025-10-12 13:22:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:22:06] Running /usr/bin/apptainer --version
[2025-10-12 13:22:06] apptainer version 1.4.3-1.el9
[2025-10-12 13:22:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:22:06] c-208-37.aglt2.org
[2025-10-12 13:22:06] apptainer works
[2025-10-12 13:22:07] Set ATHENA_PROC_NUMBER=8
[2025-10-12 13:22:07] Set ATHENA_CORE_NUMBER=8
[2025-10-12 13:22:07] Starting ATLAS job with PandaID=6839928795
[2025-10-12 13:22:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:42:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:42:09] 2025-10-12 19:41:18,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:42:09] 2025-10-12 19:41:18,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:42:09] 2025-10-12 19:41:18,841 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:42:09] 2025-10-12 19:41:18,842 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:42:09] 2025-10-12 19:41:18,843 | INFO     | sum of square deviations: 713140457.9090884
[2025-10-12 15:42:09] 2025-10-12 19:41:18,843 | INFO     | sum of deviations: 44242369375.45455
[2025-10-12 15:42:09] 2025-10-12 19:41:18,843 | INFO     | mean x: 1760294008.590909
[2025-10-12 15:42:09] 2025-10-12 19:41:18,843 | INFO     | mean y: 2385547.0454545454
[2025-10-12 15:42:09] 2025-10-12 19:41:18,843 | INFO     | -- intersect: -109204120511.83069
[2025-10-12 15:42:09] 2025-10-12 19:41:18,843 | INFO     | intersect: -109204120511.83069
[2025-10-12 15:42:09] 2025-10-12 19:41:18,843 | INFO     | chi2: 6.219820784452217
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | sum of square deviations: 635133352.8661412
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | sum of deviations: 50156277235.74013
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | mean x: 1760293856.0944881
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | mean y: 2396627.771653543
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | -- intersect: -139007444792.49597
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | intersect: -139007444792.49597
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | chi2: 5.610736413805384
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | current chi2=5.610736413805384 (change=9.792635378970582 %)
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | right removable region: 126
[2025-10-12 15:42:09] 2025-10-12 19:41:18,844 | INFO     | sum of square deviations: 635133840.0472449
[2025-10-12 15:42:09] 2025-10-12 19:41:18,845 | INFO     | sum of deviations: 2818691543.874015
[2025-10-12 15:42:09] 2025-10-12 19:41:18,845 | INFO     | mean x: 1760294161.0866141
[2025-10-12 15:42:09] 2025-10-12 19:41:18,845 | INFO     | mean y: 2466344.102362205
[2025-10-12 15:42:09] 2025-10-12 19:41:18,845 | INFO     | -- intersect: -7809629239.116067
[2025-10-12 15:42:09] 2025-10-12 19:41:18,845 | INFO     | intersect: -7809629239.116067
[2025-10-12 15:42:09] 2025-10-12 19:41:18,845 | INFO     | chi2: 1.858356671694783
[2025-10-12 15:42:09] 2025-10-12 19:41:18,849 | INFO     | current chi2=1.858356671694783 (change=70.12202222385336 %)
[2025-10-12 15:42:09] 2025-10-12 19:41:18,849 | INFO     | sum of square deviations: 563026807.5081968
[2025-10-12 15:42:09] 2025-10-12 19:41:18,850 | INFO     | sum of deviations: -15295028521.93442
[2025-10-12 15:42:09] 2025-10-12 19:41:18,850 | INFO     | mean x: 1760294313.590164
[2025-10-12 15:42:09] 2025-10-12 19:41:18,850 | INFO     | mean y: 2504242.2213114756
[2025-10-12 15:42:09] 2025-10-12 19:41:18,850 | INFO     | -- intersect: 47822166422.28289
[2025-10-12 15:42:09] 2025-10-12 19:41:18,850 | INFO     | intersect: 47822166422.28289
[2025-10-12 15:42:09] 2025-10-12 19:41:18,850 | INFO     | chi2: 0.8764954788820656
[2025-10-12 15:42:09] 2025-10-12 19:41:18,850 | INFO     | current chi2=0.8764954788820656 (change=52.83491634128987 %)
[2025-10-12 15:42:09] 2025-10-12 19:41:18,850 | INFO     | sum of square deviations: 496594299.9658108
[2025-10-12 15:42:09] 2025-10-12 19:41:18,851 | INFO     | sum of deviations: -16027343479.957264
[2025-10-12 15:42:09] 2025-10-12 19:41:18,851 | INFO     | mean x: 1760294466.094017
[2025-10-12 15:42:09] 2025-10-12 19:41:18,851 | INFO     | mean y: 2505743.6324786325
[2025-10-12 15:42:09] 2025-10-12 19:41:18,851 | INFO     | -- intersect: 56815167580.26486
[2025-10-12 15:42:09] 2025-10-12 19:41:18,851 | INFO     | intersect: 56815167580.26486
[2025-10-12 15:42:09] 2025-10-12 19:41:18,851 | INFO     | chi2: 0.8392270270781652
[2025-10-12 15:42:09] 2025-10-12 19:41:18,851 | INFO     | current chi2=0.8392270270781652 (change=4.2519844884351 %)
[2025-10-12 15:42:09] 2025-10-12 19:41:18,851 | INFO     | left removable region: 30
[2025-10-12 15:42:09] 2025-10-12 19:41:18,851 | INFO     | sum of square deviations: 274315849.15625
[2025-10-12 15:42:09] 2025-10-12 19:41:18,852 | INFO     | sum of deviations: 769259448.5625
[2025-10-12 15:42:09] 2025-10-12 19:41:18,853 | INFO     | mean x: 1760294740.59375
[2025-10-12 15:42:09] 2025-10-12 19:41:18,853 | INFO     | mean y: 2497011.9375
[2025-10-12 15:42:09] 2025-10-12 19:41:18,853 | INFO     | -- intersect: -4933868734.415383
[2025-10-12 15:42:09] 2025-10-12 19:41:18,854 | INFO     | intersect: -4933868734.415383
[2025-10-12 15:42:09] 2025-10-12 19:41:18,854 | INFO     | chi2: 0.0005543100149812704
[2025-10-12 15:42:09] 2025-10-12 19:41:18,854 | INFO     | -- intersect: -4933868734.415383
[2025-10-12 15:42:09] 2025-10-12 19:41:18,854 | INFO     | current memory leak: 2.80 B/s (using 96 data points, chi2=0.00)
[2025-10-12 15:42:09] 2025-10-12 19:41:18,854 | INFO     | could have reported an average CPU frequency of 3659 MHz (8 samples)
[2025-10-12 15:42:09] 2025-10-12 19:41:18,854 | INFO     | ..............................
[2025-10-12 15:42:09] 2025-10-12 19:41:18,854 | INFO     | . Timing measurements:
[2025-10-12 15:42:09] 2025-10-12 19:41:18,854 | INFO     | . get job = 1 s
[2025-10-12 15:42:09] 2025-10-12 19:41:18,854 | INFO     | . initial setup = 9 s
[2025-10-12 15:42:09] 2025-10-12 19:41:18,855 | INFO     | . payload setup = 66 s
[2025-10-12 15:42:09] 2025-10-12 19:41:18,855 | INFO     | . stage-in = 0 s
[2025-10-12 15:42:09] 2025-10-12 19:41:18,855 | INFO     | . payload execution = 8051 s
[2025-10-12 15:42:09] 2025-10-12 19:41:18,855 | INFO     | . stage-out = 3 s
[2025-10-12 15:42:09] 2025-10-12 19:41:18,855 | INFO     | . log creation = 0 s
[2025-10-12 15:42:09] 2025-10-12 19:41:18,855 | INFO     | ..............................
[2025-10-12 15:42:09] 2025-10-12 19:41:19,065 | INFO     | 
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | job summary report
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | --------------------------------------------------
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | PanDA job id: 6839928795
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | task id: 46676269
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | errors: (none)
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | pilot state: finished 
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | transexitcode: 0
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | exeerrorcode: 0
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | exeerrordiag: 
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | exitcode: 0
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | exitmsg: OK
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | cpuconsumptiontime: 25844 s
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | nevents: 400
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | neventsw: 0
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | pid: 3423465
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | pgrp: 3423465
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | corecount: 8
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | event service: False
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | sizes: {0: 2348635, 1: 2348834, 2: 2348834, 13: 2348862, 24: 2348918, 34: 2348946, 41: 2349364, 45: 2349392, 8122: 2377159, 8126: 2386157, 8128: 2386213, 8171: 238
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | --------------------------------------------------
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | 
[2025-10-12 15:42:09] 2025-10-12 19:41:19,066 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,179 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:42:09] 2025-10-12 19:41:19,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,179 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:42:09] 2025-10-12 19:41:19,179 | INFO     | job 6839928795 has completed (purged errors)
[2025-10-12 15:42:09] 2025-10-12 19:41:19,179 | INFO     | overall cleanup function is called
[2025-10-12 15:42:09] 2025-10-12 19:41:20,188 | INFO     | --- collectZombieJob: --- 10, [3423465]
[2025-10-12 15:42:09] 2025-10-12 19:41:20,188 | INFO     | zombie collector waiting for pid 3423465
[2025-10-12 15:42:09] 2025-10-12 19:41:20,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:42:09] 2025-10-12 19:41:20,189 | INFO     | collected zombie processes
[2025-10-12 15:42:09] 2025-10-12 19:41:20,189 | INFO     | will attempt to kill all subprocesses of pid=3423465
[2025-10-12 15:42:09] 2025-10-12 19:41:21,623 | INFO     | process IDs to be killed: [3423465] (in reverse order)
[2025-10-12 15:42:09] 2025-10-12 19:41:22,029 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:42:09] 2025-10-12 19:41:22,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:42:09] 2025-10-12 19:41:22,051 | INFO     | did not find any defunct processes belonging to 3423465
[2025-10-12 15:42:09] 2025-10-12 19:41:22,106 | INFO     | did not find any defunct processes belonging to 3423465
[2025-10-12 15:42:09] 2025-10-12 19:41:22,107 | INFO     | ready for new job
[2025-10-12 15:42:09] 2025-10-12 19:41:22,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:42:09] 2025-10-12 19:41:22,108 | INFO     | ***************************************
[2025-10-12 15:42:09] 2025-10-12 19:41:22,118 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:42:09] 2025-10-12 19:41:22,118 | INFO     | ***************************************
[2025-10-12 15:42:09] 2025-10-12 19:41:22,118 | INFO     | 
[2025-10-12 15:42:09] 2025-10-12 19:41:22,142 | INFO     | architecture information:
[2025-10-12 15:42:09] 2025-10-12 19:41:22,159 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:42:09] 2025-10-12 19:41:22,227 | INFO     | cat /etc/os-release:
[2025-10-12 15:42:09] NAME="CentOS Linux"
[2025-10-12 15:42:09] VERSION="7 (Core)"
[2025-10-12 15:42:09] ID="centos"
[2025-10-12 15:42:09] ID_LIKE="rhel fedora"
[2025-10-12 15:42:09] VERSION_ID="7"
[2025-10-12 15:42:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:42:09] ANSI_COLOR="0;31"
[2025-10-12 15:42:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:42:09] HOME_URL="https://www.centos.org/"
[2025-10-12 15:42:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:42:09] 
[2025-10-12 15:42:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:42:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:42:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:42:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:42:09] 
[2025-10-12 15:42:09] 2025-10-12 19:41:22,228 | INFO     | ***************************************
[2025-10-12 15:42:09] 2025-10-12 19:41:22,731 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-12 15:42:09] 2025-10-12 19:41:22,838 | INFO     | sufficient remaining disk space (170223730688 B)
[2025-10-12 15:42:09] 2025-10-12 19:41:22,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:42:09] 2025-10-12 19:41:22,838 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:42:09] 2025-10-12 19:41:22,838 | INFO     | update_server=False
[2025-10-12 15:42:09] 2025-10-12 19:41:22,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:42:09] 2025-10-12 19:41:22,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:42:09] 2025-10-12 19:41:22,840 | INFO     | aborting loop
[2025-10-12 15:42:09] 2025-10-12 19:41:22,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:42:09] 2025-10-12 19:41:23,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:42:09] 2025-10-12 19:41:23,793 | INFO     | all job control threads have been joined
[2025-10-12 15:42:09] 2025-10-12 19:41:23,844 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:23,845 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:23,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:23,867 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:23,871 | INFO     | all data control threads have been joined
[2025-10-12 15:42:09] 2025-10-12 19:41:24,024 | INFO     | all payload control threads have been joined
[2025-10-12 15:42:09] 2025-10-12 19:41:24,056 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:24,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:42:09] 2025-10-12 19:41:24,368 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:24,385 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:24,799 | INFO     | [job] control thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:24,846 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:24,877 | INFO     | [data] control thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:25,030 | INFO     | [payload] control thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:25,088 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:25,307 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:25,308 | INFO     | [job] validate thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:25,308 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:27,027 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:42:09] 2025-10-12 19:41:52,301 | INFO     | PID=3409487 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:42:09] 2025-10-12 19:41:52,304 | INFO     | .. there are 22 such processes running
[2025-10-12 15:42:09] 2025-10-12 19:41:52,304 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:42:09] 2025-10-12 19:41:52,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:42:09] 2025-10-12 19:41:52,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:42:09] 2025-10-12 19:42:00,097 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:42:09] 2025-10-12 19:42:01,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770743035712)>', '<ExcThread(monitor, started 139770114078464)>']
[2025-10-12 15:42:09] 2025-10-12 19:42:02,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:42:09] 2025-10-12 19:42:02,376 | INFO     | [monitor] control thread has ended
[2025-10-12 15:42:09] 2025-10-12 19:42:06,632 | INFO     | all workflow threads have been joined
[2025-10-12 15:42:09] 2025-10-12 19:42:06,633 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:42:09] 2025-10-12 19:42:06,633 | INFO     | traces error code: 0
[2025-10-12 15:42:09] 2025-10-12 19:42:06,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:42:09] 2025-10-12 19:42:07,870 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:42:09] 2025-10-12 19:42:07,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:42:09] 2025-10-12 19:42:07,994 [wrapper] pilotpid: 3409487
[2025-10-12 15:42:09] 2025-10-12 19:42:08,042 [wrapper] Pilot exit status: 0
[2025-10-12 15:42:09] 2025-10-12 19:42:08,217 [wrapper] pandaids: 6839928795
[2025-10-12 15:42:09] 2025-10-12 19:42:08,723 [wrapper] cleanup supervisor_pilot 3852750 3409488
[2025-10-12 15:42:09] 2025-10-12 19:42:08,767 [wrapper] Test setup, not cleaning
[2025-10-12 15:42:09] 2025-10-12 19:42:08,908 [wrapper] apfmon messages muted
[2025-10-12 15:42:09] 2025-10-12 19:42:08,981 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:42:09] 2025-10-12 19:42:09,047 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:42:09]  *** Error codes and diagnostics ***
[2025-10-12 15:42:09]     "exeErrorCode": 0,
[2025-10-12 15:42:09]     "exeErrorDiag": "",
[2025-10-12 15:42:09]     "pilotErrorCode": 0,
[2025-10-12 15:42:09]     "pilotErrorDiag": "",
[2025-10-12 15:42:09]  *** Listing of results directory ***
[2025-10-12 15:42:09] total 415392
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 08:10 pilot3.tar.gz
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 08:15 queuedata.json
[2025-10-12 15:42:09] -rwx------. 1 boincer umatlas     36292 Oct 12 08:16 runpilot2-wrapper.sh
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:42:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:22 run_atlas
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:22 job.xml
[2025-10-12 15:42:09] -rw-r--r--. 2 boincer umatlas 219937992 Oct 12 13:22 EVNT.46676267._003756.pool.root.1
[2025-10-12 15:42:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:22 shared
[2025-10-12 15:42:09] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 13:22 input.tar.gz
[2025-10-12 15:42:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:22 start_atlas.sh
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:22 boinc_lockfile
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 13:22 pandaJob.out
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas    975528 Oct 12 13:23 agis_schedconf.cvmfs.json
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas   1560580 Oct 12 13:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:42:09] drwx------. 5 boincer umatlas      4096 Oct 12 13:23 pilot3
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas 198650505 Oct 12 15:38 HITS.46676269._077932.pool.root.1
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas       530 Oct 12 15:39 boinc_task_state.xml
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas      7174 Oct 12 15:39 init_data.xml
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas      1047 Oct 12 15:40 memory_monitor_summary.json
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas    362697 Oct 12 15:40 log.46676269._077932.job.log.tgz.1
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas      7799 Oct 12 15:41 heartbeat.json
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas        95 Oct 12 15:41 pilot_heartbeat.json
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas      4825 Oct 12 15:42 pilotlog.txt
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:42 boinc_mmap_file
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas   1075927 Oct 12 15:42 log.46676269._077932.job.log.1
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:42 wrapper_checkpoint.txt
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas       357 Oct 12 15:42 output.list
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:42 runtime_log
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas   1454080 Oct 12 15:42 result.tar.gz
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 15:42 runtime_log.err
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas       658 Oct 12 15:42 omEMDm6AAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmljjNDma8JLHn.diag
[2025-10-12 15:42:09] -rw-r--r--. 1 boincer umatlas     21002 Oct 12 15:42 stderr.txt
[2025-10-12 15:42:09] HITS file was successfully produced:
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas 198650505 Oct 12 15:38 shared/HITS.pool.root.1
[2025-10-12 15:42:09]  *** Contents of shared directory: ***
[2025-10-12 15:42:09] total 410780
[2025-10-12 15:42:09] -rw-r--r--. 2 boincer umatlas 219937992 Oct 12 13:22 ATLAS.root_0
[2025-10-12 15:42:09] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 13:22 input.tar.gz
[2025-10-12 15:42:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:22 start_atlas.sh
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas 198650505 Oct 12 15:38 HITS.pool.root.1
[2025-10-12 15:42:09] -rw-------. 1 boincer umatlas   1454080 Oct 12 15:42 result.tar.gz
15:42:11 (3403316): run_atlas exited; CPU time 26065.651238
15:42:11 (3403316): called boinc_finish(0)

</stderr_txt>
]]>

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